EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4477 bases
Position: chrreftig_122:47647-52123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000001999	CwfJ_C_1	PF04677.15	1.7e-31	1	1
ENSCSAVP00000002000	CwfJ_C_1	PF04677.15	2e-26	1	1
ENSCSAVP00000001999	CwfJ_C_2	PF04676.14	1.3e-12	1	1
ENSCSAVP00000002000	CwfJ_C_2	PF04676.14	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002034	-	1864	-	ENSCSAVP00000002000	612 (aa)	-	H2Y9K2
ENSCSAVT00000002033	-	1908	-	ENSCSAVP00000001999	540 (aa)	-	H2Y9K1

Gene Model

Click here to download ENSCSAVG00000001169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001169	-	99	44.689	ENSG00000095485	CWF19L1	99	45.338	Homo_sapiens
ENSCSAVG00000001169	-	99	44.245	ENSAPOG00000015976	cwf19l1	96	44.610	Acanthochromis_polyacanthus
ENSCSAVG00000001169	-	99	45.719	ENSAMEG00000006811	CWF19L1	95	46.792	Ailuropoda_melanoleuca
ENSCSAVG00000001169	-	99	43.036	ENSACIG00000011436	cwf19l1	96	43.750	Amphilophus_citrinellus
ENSCSAVG00000001169	-	99	44.424	ENSAOCG00000014777	cwf19l1	96	44.796	Amphiprion_ocellaris
ENSCSAVG00000001169	-	99	44.505	ENSAPEG00000019618	cwf19l1	96	44.879	Amphiprion_percula
ENSCSAVG00000001169	-	99	42.781	ENSATEG00000021314	cwf19l1	96	43.407	Anabas_testudineus
ENSCSAVG00000001169	-	85	46.269	ENSAPLG00000011370	CWF19L1	100	46.269	Anas_platyrhynchos
ENSCSAVG00000001169	-	99	43.649	ENSACAG00000016026	CWF19L1	95	44.074	Anolis_carolinensis
ENSCSAVG00000001169	-	99	45.009	ENSANAG00000023190	CWF19L1	99	45.818	Aotus_nancymaae
ENSCSAVG00000001169	-	99	43.470	ENSACLG00000009159	cwf19l1	96	43.750	Astatotilapia_calliptera
ENSCSAVG00000001169	-	99	44.301	ENSAMXG00000007302	cwf19l1	99	44.301	Astyanax_mexicanus
ENSCSAVG00000001169	-	99	44.545	ENSBTAG00000007594	CWF19L1	99	45.191	Bos_taurus
ENSCSAVG00000001169	-	99	38.208	WBGene00017534	F17A9.2	98	38.391	Caenorhabditis_elegans
ENSCSAVG00000001169	-	99	44.954	ENSCJAG00000017176	CWF19L1	99	45.688	Callithrix_jacchus
ENSCSAVG00000001169	-	99	45.704	ENSCAFG00000009624	CWF19L1	95	46.869	Canis_familiaris
ENSCSAVG00000001169	-	99	45.704	ENSCAFG00020008275	CWF19L1	95	46.869	Canis_lupus_dingo
ENSCSAVG00000001169	-	99	44.545	ENSCHIG00000022368	CWF19L1	99	45.091	Capra_hircus
ENSCSAVG00000001169	-	99	44.872	ENSTSYG00000012364	CWF19L1	95	45.644	Carlito_syrichta
ENSCSAVG00000001169	-	90	42.105	ENSCAPG00000011031	CWF19L1	100	42.713	Cavia_aperea
ENSCSAVG00000001169	-	99	45.238	ENSCPOG00000010890	CWF19L1	95	46.198	Cavia_porcellus
ENSCSAVG00000001169	-	99	45.073	ENSCCAG00000031321	CWF19L1	96	46.300	Cebus_capucinus
ENSCSAVG00000001169	-	69	42.746	ENSCATG00000034615	-	76	43.896	Cercocebus_atys
ENSCSAVG00000001169	-	99	44.954	ENSCATG00000043079	-	99	45.688	Cercocebus_atys
ENSCSAVG00000001169	-	99	45.037	ENSCLAG00000007821	CWF19L1	99	45.688	Chinchilla_lanigera
ENSCSAVG00000001169	-	99	44.102	ENSCSAG00000005656	CWF19L1	99	44.909	Chlorocebus_sabaeus
ENSCSAVG00000001169	-	79	51.562	ENSCHOG00000013326	CWF19L1	79	51.562	Choloepus_hoffmanni
ENSCSAVG00000001169	-	99	45.772	ENSCPBG00000015743	CWF19L1	96	46.139	Chrysemys_picta_bellii
ENSCSAVG00000001169	-	96	68.893	ENSCING00000002739	-	99	68.635	Ciona_intestinalis
ENSCSAVG00000001169	-	99	44.343	ENSCANG00000037983	CWF19L1	99	45.155	Colobus_angolensis_palliatus
ENSCSAVG00000001169	-	99	45.688	ENSCGRG00001015704	Cwf19l1	99	46.239	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001169	-	99	45.688	ENSCGRG00000003911	Cwf19l1	99	46.239	Cricetulus_griseus_crigri
ENSCSAVG00000001169	-	98	43.292	ENSCSEG00000004325	cwf19l1	96	43.590	Cynoglossus_semilaevis
ENSCSAVG00000001169	-	88	40.408	ENSCVAG00000005908	cwf19l1	87	40.421	Cyprinodon_variegatus
ENSCSAVG00000001169	-	99	44.465	ENSDARG00000002128	cwf19l1	99	44.283	Danio_rerio
ENSCSAVG00000001169	-	90	46.016	ENSDNOG00000036842	CWF19L1	96	46.414	Dasypus_novemcinctus
ENSCSAVG00000001169	-	99	45.273	ENSDORG00000011967	Cwf19l1	99	45.273	Dipodomys_ordii
ENSCSAVG00000001169	-	99	35.978	FBgn0033615	CG7741	96	36.000	Drosophila_melanogaster
ENSCSAVG00000001169	-	65	44.340	ENSETEG00000008460	CWF19L1	58	45.455	Echinops_telfairi
ENSCSAVG00000001169	-	99	38.681	ENSEBUG00000003141	-	100	38.462	Eptatretus_burgeri
ENSCSAVG00000001169	-	99	45.355	ENSEASG00005009032	CWF19L1	98	45.355	Equus_asinus_asinus
ENSCSAVG00000001169	-	99	45.173	ENSECAG00000016333	CWF19L1	99	43.898	Equus_caballus
ENSCSAVG00000001169	-	90	52.727	ENSEEUG00000014324	CWF19L1	92	52.727	Erinaceus_europaeus
ENSCSAVG00000001169	-	99	43.950	ENSELUG00000010739	cwf19l1	96	45.098	Esox_lucius
ENSCSAVG00000001169	-	99	44.991	ENSFCAG00000010585	CWF19L1	95	46.038	Felis_catus
ENSCSAVG00000001169	-	85	46.039	ENSFALG00000012841	CWF19L1	96	45.781	Ficedula_albicollis
ENSCSAVG00000001169	-	99	44.891	ENSFDAG00000009400	CWF19L1	99	45.620	Fukomys_damarensis
ENSCSAVG00000001169	-	99	42.451	ENSFHEG00000009449	cwf19l1	96	42.569	Fundulus_heteroclitus
ENSCSAVG00000001169	-	90	48.897	ENSGMOG00000013248	cwf19l1	88	48.897	Gadus_morhua
ENSCSAVG00000001169	-	99	43.548	ENSGAFG00000020887	cwf19l1	95	44.238	Gambusia_affinis
ENSCSAVG00000001169	-	99	41.145	ENSGACG00000000738	cwf19l1	96	41.590	Gasterosteus_aculeatus
ENSCSAVG00000001169	-	94	43.301	ENSGAGG00000013262	CWF19L1	95	42.994	Gopherus_agassizii
ENSCSAVG00000001169	-	99	43.470	ENSHBUG00000006747	cwf19l1	96	43.750	Haplochromis_burtoni
ENSCSAVG00000001169	-	99	44.727	ENSHGLG00000018918	CWF19L1	99	44.909	Heterocephalus_glaber_female
ENSCSAVG00000001169	-	99	44.727	ENSHGLG00100006241	CWF19L1	99	44.909	Heterocephalus_glaber_male
ENSCSAVG00000001169	-	99	44.324	ENSHCOG00000004362	cwf19l1	95	45.794	Hippocampus_comes
ENSCSAVG00000001169	-	99	43.540	ENSIPUG00000016884	cwf19l1	99	43.894	Ictalurus_punctatus
ENSCSAVG00000001169	-	99	45.055	ENSSTOG00000005784	CWF19L1	95	46.212	Ictidomys_tridecemlineatus
ENSCSAVG00000001169	-	99	45.604	ENSJJAG00000015368	Cwf19l1	99	46.182	Jaculus_jaculus
ENSCSAVG00000001169	-	99	42.274	ENSKMAG00000009649	cwf19l1	96	42.569	Kryptolebias_marmoratus
ENSCSAVG00000001169	-	67	46.257	ENSLACG00000000333	-	99	46.257	Latimeria_chalumnae
ENSCSAVG00000001169	-	99	45.155	ENSLOCG00000017035	cwf19l1	95	45.386	Lepisosteus_oculatus
ENSCSAVG00000001169	-	99	45.355	ENSLAFG00000014975	CWF19L1	99	46.000	Loxodonta_africana
ENSCSAVG00000001169	-	99	44.771	ENSMFAG00000031202	-	99	45.505	Macaca_fascicularis
ENSCSAVG00000001169	-	99	43.223	ENSMFAG00000040442	-	99	43.223	Macaca_fascicularis
ENSCSAVG00000001169	-	99	44.708	ENSMMUG00000018472	CWF19L1	99	45.438	Macaca_mulatta
ENSCSAVG00000001169	-	99	43.040	ENSMMUG00000011382	-	99	43.040	Macaca_mulatta
ENSCSAVG00000001169	-	85	52.577	ENSMNEG00000028051	-	98	53.608	Macaca_nemestrina
ENSCSAVG00000001169	-	99	42.486	ENSMNEG00000036357	-	99	42.486	Macaca_nemestrina
ENSCSAVG00000001169	-	99	41.423	ENSMLEG00000036355	CWF19L1	98	46.739	Mandrillus_leucophaeus
ENSCSAVG00000001169	-	99	43.214	ENSMAMG00000019265	cwf19l1	99	43.214	Mastacembelus_armatus
ENSCSAVG00000001169	-	99	43.470	ENSMZEG00005016021	cwf19l1	96	43.750	Maylandia_zebra
ENSCSAVG00000001169	-	85	44.515	ENSMGAG00000002075	CWF19L1	100	44.699	Meleagris_gallopavo
ENSCSAVG00000001169	-	99	45.404	ENSMAUG00000016480	Cwf19l1	100	45.956	Mesocricetus_auratus
ENSCSAVG00000001169	-	99	44.262	ENSMICG00000034162	CWF19L1	99	44.909	Microcebus_murinus
ENSCSAVG00000001169	-	99	44.891	ENSMOCG00000021513	Cwf19l1	99	45.438	Microtus_ochrogaster
ENSCSAVG00000001169	-	99	42.397	ENSMMOG00000006088	cwf19l1	96	43.199	Mola_mola
ENSCSAVG00000001169	-	99	45.155	ENSMODG00000010572	CWF19L1	96	45.951	Monodelphis_domestica
ENSCSAVG00000001169	-	98	43.066	ENSMALG00000003265	cwf19l1	96	43.364	Monopterus_albus
ENSCSAVG00000001169	-	99	45.073	MGP_CAROLIEiJ_G0022992	Cwf19l1	99	45.803	Mus_caroli
ENSCSAVG00000001169	-	99	44.991	ENSMUSG00000025200	Cwf19l1	99	45.719	Mus_musculus
ENSCSAVG00000001169	-	99	44.991	MGP_PahariEiJ_G0014482	Cwf19l1	99	45.355	Mus_pahari
ENSCSAVG00000001169	-	99	45.438	MGP_SPRETEiJ_G0023913	Cwf19l1	99	46.168	Mus_spretus
ENSCSAVG00000001169	-	99	45.355	ENSMPUG00000016977	CWF19L1	95	46.415	Mustela_putorius_furo
ENSCSAVG00000001169	-	99	45.803	ENSMLUG00000016506	CWF19L1	99	46.168	Myotis_lucifugus
ENSCSAVG00000001169	-	99	44.954	ENSNGAG00000021145	Cwf19l1	99	45.372	Nannospalax_galili
ENSCSAVG00000001169	-	99	43.113	ENSNBRG00000014972	cwf19l1	96	43.382	Neolamprologus_brichardi
ENSCSAVG00000001169	-	99	44.118	ENSNLEG00000014744	CWF19L1	99	44.404	Nomascus_leucogenys
ENSCSAVG00000001169	-	79	48.438	ENSMEUG00000016348	CWF19L1	81	48.438	Notamacropus_eugenii
ENSCSAVG00000001169	-	99	41.058	ENSOPRG00000005680	CWF19L1	99	41.788	Ochotona_princeps
ENSCSAVG00000001169	-	99	45.238	ENSODEG00000017213	CWF19L1	99	45.887	Octodon_degus
ENSCSAVG00000001169	-	99	43.113	ENSONIG00000009944	cwf19l1	95	43.542	Oreochromis_niloticus
ENSCSAVG00000001169	-	99	45.521	ENSOANG00000002486	CWF19L1	95	46.490	Ornithorhynchus_anatinus
ENSCSAVG00000001169	-	99	44.928	ENSOCUG00000013130	CWF19L1	99	44.928	Oryctolagus_cuniculus
ENSCSAVG00000001169	-	99	43.750	ENSORLG00000017287	cwf19l1	96	44.280	Oryzias_latipes
ENSCSAVG00000001169	-	99	43.571	ENSORLG00015005168	cwf19l1	96	44.096	Oryzias_latipes_hsok
ENSCSAVG00000001169	-	99	43.828	ENSOMEG00000023197	cwf19l1	96	44.362	Oryzias_melastigma
ENSCSAVG00000001169	-	99	43.682	ENSOGAG00000013425	CWF19L1	95	44.382	Otolemur_garnettii
ENSCSAVG00000001169	-	99	44.746	ENSOARG00000014114	CWF19L1	99	44.746	Ovis_aries
ENSCSAVG00000001169	-	99	44.936	ENSPPAG00000031948	CWF19L1	99	45.588	Pan_paniscus
ENSCSAVG00000001169	-	99	44.991	ENSPPRG00000005516	CWF19L1	95	46.038	Panthera_pardus
ENSCSAVG00000001169	-	99	45.173	ENSPTIG00000009695	CWF19L1	95	46.226	Panthera_tigris_altaica
ENSCSAVG00000001169	-	99	44.936	ENSPTRG00000002843	CWF19L1	99	45.588	Pan_troglodytes
ENSCSAVG00000001169	-	99	41.971	ENSPANG00000010712	-	99	42.987	Papio_anubis
ENSCSAVG00000001169	-	99	44.954	ENSPANG00000021205	-	99	45.688	Papio_anubis
ENSCSAVG00000001169	-	99	44.505	ENSPKIG00000009086	cwf19l1	99	44.324	Paramormyrops_kingsleyae
ENSCSAVG00000001169	-	99	45.956	ENSPSIG00000006990	CWF19L1	96	46.516	Pelodiscus_sinensis
ENSCSAVG00000001169	-	99	43.478	ENSPMGG00000004881	cwf19l1	97	43.820	Periophthalmus_magnuspinnatus
ENSCSAVG00000001169	-	99	45.073	ENSPEMG00000013069	Cwf19l1	100	45.438	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001169	-	61	41.159	ENSPMAG00000002331	-	85	41.846	Petromyzon_marinus
ENSCSAVG00000001169	-	99	44.809	ENSPCIG00000022698	CWF19L1	96	45.403	Phascolarctos_cinereus
ENSCSAVG00000001169	-	99	43.113	ENSPFOG00000016594	cwf19l1	95	43.785	Poecilia_formosa
ENSCSAVG00000001169	-	99	41.606	ENSPLAG00000005289	cwf19l1	95	42.830	Poecilia_latipinna
ENSCSAVG00000001169	-	99	43.113	ENSPMEG00000017406	cwf19l1	95	43.785	Poecilia_mexicana
ENSCSAVG00000001169	-	99	43.292	ENSPREG00000021583	cwf19l1	95	43.970	Poecilia_reticulata
ENSCSAVG00000001169	-	99	44.872	ENSPPYG00000002563	CWF19L1	95	46.110	Pongo_abelii
ENSCSAVG00000001169	-	76	48.104	ENSPCAG00000012404	CWF19L1	77	48.104	Procavia_capensis
ENSCSAVG00000001169	-	99	45.073	ENSPCOG00000019363	CWF19L1	99	45.803	Propithecus_coquereli
ENSCSAVG00000001169	-	99	45.735	ENSPVAG00000008028	CWF19L1	99	46.000	Pteropus_vampyrus
ENSCSAVG00000001169	-	99	43.548	ENSPNYG00000010443	cwf19l1	96	43.831	Pundamilia_nyererei
ENSCSAVG00000001169	-	99	43.806	ENSPNAG00000017936	cwf19l1	99	43.806	Pygocentrus_nattereri
ENSCSAVG00000001169	-	99	45.255	ENSRNOG00000012763	Cwf19l1	99	45.803	Rattus_norvegicus
ENSCSAVG00000001169	-	99	44.708	ENSRBIG00000033458	CWF19L1	99	45.521	Rhinopithecus_bieti
ENSCSAVG00000001169	-	99	44.708	ENSRROG00000043660	CWF19L1	99	45.521	Rhinopithecus_roxellana
ENSCSAVG00000001169	-	99	45.604	ENSSBOG00000027396	CWF19L1	99	46.182	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001169	-	99	44.689	ENSSHAG00000001813	CWF19L1	95	45.455	Sarcophilus_harrisii
ENSCSAVG00000001169	-	99	44.708	ENSSFOG00015023080	cwf19l1	95	45.455	Scleropages_formosus
ENSCSAVG00000001169	-	99	41.754	ENSSMAG00000010056	cwf19l1	96	42.572	Scophthalmus_maximus
ENSCSAVG00000001169	-	99	41.125	ENSSDUG00000013998	cwf19l1	96	42.000	Seriola_dumerili
ENSCSAVG00000001169	-	99	41.873	ENSSLDG00000017696	cwf19l1	96	42.650	Seriola_lalandi_dorsalis
ENSCSAVG00000001169	-	77	39.714	ENSSARG00000014052	CWF19L1	84	40.857	Sorex_araneus
ENSCSAVG00000001169	-	99	44.161	ENSSPUG00000000988	CWF19L1	95	44.423	Sphenodon_punctatus
ENSCSAVG00000001169	-	99	40.827	ENSSPAG00000010818	cwf19l1	96	41.078	Stegastes_partitus
ENSCSAVG00000001169	-	99	44.991	ENSSSCG00000010550	CWF19L1	99	45.636	Sus_scrofa
ENSCSAVG00000001169	-	99	43.889	ENSTRUG00000005661	cwf19l1	96	43.670	Takifugu_rubripes
ENSCSAVG00000001169	-	94	42.402	ENSTNIG00000018723	cwf19l1	96	43.358	Tetraodon_nigroviridis
ENSCSAVG00000001169	-	99	35.348	ENSTBEG00000016735	CWF19L1	95	35.361	Tupaia_belangeri
ENSCSAVG00000001169	-	95	44.952	ENSTTRG00000011886	CWF19L1	95	44.952	Tursiops_truncatus
ENSCSAVG00000001169	-	99	44.991	ENSUMAG00000022786	CWF19L1	95	46.038	Ursus_maritimus
ENSCSAVG00000001169	-	56	38.978	ENSVPAG00000010096	CWF19L1	100	40.127	Vicugna_pacos
ENSCSAVG00000001169	-	99	45.803	ENSVVUG00000024848	CWF19L1	95	46.970	Vulpes_vulpes
ENSCSAVG00000001169	-	99	47.993	ENSXETG00000003719	cwf19l1	99	47.993	Xenopus_tropicalis
ENSCSAVG00000001169	-	99	43.148	ENSXCOG00000011764	cwf19l1	95	43.846	Xiphophorus_couchianus
ENSCSAVG00000001169	-	99	43.094	ENSXMAG00000009283	cwf19l1	96	43.786	Xiphophorus_maculatus