EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001212 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2451 bases
Position: chrreftig_91:1166333-1168783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002064	RRM_1	PF00076.22	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002101	-	507	-	ENSCSAVP00000002064	158 (aa)	-	H2Y9R6

Gene Model

Click here to download ENSCSAVG00000001212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001212's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001212	-	90	42.763	ENSG00000063046	EIF4B	84	43.243	Homo_sapiens
ENSCSAVG00000001212	-	99	39.521	ENSANAG00000030795	-	66	38.095	Aotus_nancymaae
ENSCSAVG00000001212	-	88	38.926	ENSANAG00000032230	-	77	38.514	Aotus_nancymaae
ENSCSAVG00000001212	-	90	40.523	ENSANAG00000027568	-	54	38.816	Aotus_nancymaae
ENSCSAVG00000001212	-	90	42.763	ENSCJAG00000018176	EIF4B	70	36.111	Callithrix_jacchus
ENSCSAVG00000001212	-	90	40.132	ENSCJAG00000046740	-	85	40.136	Callithrix_jacchus
ENSCSAVG00000001212	-	88	43.624	ENSCAFG00020021666	-	80	43.243	Canis_lupus_dingo
ENSCSAVG00000001212	-	91	42.857	ENSCAFG00020023868	-	80	42.384	Canis_lupus_dingo
ENSCSAVG00000001212	-	90	40.789	ENSCCAG00000028899	-	56	40.397	Cebus_capucinus
ENSCSAVG00000001212	-	96	36.709	ENSCCAG00000026166	-	86	35.862	Cebus_capucinus
ENSCSAVG00000001212	-	90	38.667	ENSCATG00000028753	-	82	38.356	Cercocebus_atys
ENSCSAVG00000001212	-	88	41.060	ENSCATG00000032438	-	80	40.136	Cercocebus_atys
ENSCSAVG00000001212	-	90	42.105	ENSCANG00000035779	-	68	41.722	Colobus_angolensis_palliatus
ENSCSAVG00000001212	-	90	40.940	ENSCANG00000042944	-	80	40.541	Colobus_angolensis_palliatus
ENSCSAVG00000001212	-	84	32.624	ENSCGRG00001009005	-	80	32.867	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001212	-	84	32.624	ENSCGRG00000004684	-	80	32.867	Cricetulus_griseus_crigri
ENSCSAVG00000001212	-	89	42.568	ENSEBUG00000003312	-	75	42.953	Eptatretus_burgeri
ENSCSAVG00000001212	-	90	33.562	ENSFDAG00000014855	-	74	33.103	Fukomys_damarensis
ENSCSAVG00000001212	-	90	42.105	ENSGGOG00000004382	-	78	41.722	Gorilla_gorilla
ENSCSAVG00000001212	-	90	41.447	ENSGGOG00000040010	-	65	41.060	Gorilla_gorilla
ENSCSAVG00000001212	-	90	39.216	ENSGGOG00000037011	-	74	37.500	Gorilla_gorilla
ENSCSAVG00000001212	-	77	42.424	ENSHGLG00000002541	-	90	41.958	Heterocephalus_glaber_female
ENSCSAVG00000001212	-	95	40.491	ENSHGLG00000003859	-	72	39.073	Heterocephalus_glaber_female
ENSCSAVG00000001212	-	88	39.597	ENSHGLG00000018154	-	75	38.776	Heterocephalus_glaber_female
ENSCSAVG00000001212	-	88	38.926	ENSHGLG00100014712	-	73	38.095	Heterocephalus_glaber_male
ENSCSAVG00000001212	-	90	35.526	ENSHGLG00100014557	-	90	35.099	Heterocephalus_glaber_male
ENSCSAVG00000001212	-	95	40.491	ENSHGLG00100001246	-	72	39.073	Heterocephalus_glaber_male
ENSCSAVG00000001212	-	90	39.333	ENSMFAG00000033728	-	80	38.926	Macaca_fascicularis
ENSCSAVG00000001212	-	90	41.447	ENSMFAG00000044995	-	72	41.060	Macaca_fascicularis
ENSCSAVG00000001212	-	90	42.763	ENSMMUG00000001062	EIF4B	84	43.243	Macaca_mulatta
ENSCSAVG00000001212	-	90	40.789	ENSMMUG00000042124	-	62	40.397	Macaca_mulatta
ENSCSAVG00000001212	-	90	42.105	ENSMMUG00000037830	-	67	41.722	Macaca_mulatta
ENSCSAVG00000001212	-	90	40.789	ENSMNEG00000043577	-	71	40.397	Macaca_nemestrina
ENSCSAVG00000001212	-	90	42.763	ENSMNEG00000028622	-	79	42.384	Macaca_nemestrina
ENSCSAVG00000001212	-	90	39.333	ENSMNEG00000041946	-	80	38.926	Macaca_nemestrina
ENSCSAVG00000001212	-	90	42.763	ENSMLEG00000033967	-	72	42.384	Mandrillus_leucophaeus
ENSCSAVG00000001212	-	88	39.735	ENSMLEG00000028830	-	80	38.776	Mandrillus_leucophaeus
ENSCSAVG00000001212	-	90	38.667	ENSMLEG00000006274	-	83	38.356	Mandrillus_leucophaeus
ENSCSAVG00000001212	-	87	41.333	ENSMGAG00000005127	-	92	41.096	Meleagris_gallopavo
ENSCSAVG00000001212	-	97	37.195	ENSMAUG00000014007	-	69	36.424	Mesocricetus_auratus
ENSCSAVG00000001212	-	99	38.462	ENSMICG00000033942	-	62	36.735	Microcebus_murinus
ENSCSAVG00000001212	-	99	34.783	ENSMICG00000035704	-	67	32.639	Microcebus_murinus
ENSCSAVG00000001212	-	85	42.143	ENSMOCG00000006053	-	78	42.963	Microtus_ochrogaster
ENSCSAVG00000001212	-	90	41.447	ENSMOCG00000012575	-	84	41.216	Microtus_ochrogaster
ENSCSAVG00000001212	-	87	41.497	ENSMALG00000021976	eif4bb	79	40.397	Monopterus_albus
ENSCSAVG00000001212	-	56	43.478	ENSNGAG00000006827	-	55	43.478	Nannospalax_galili
ENSCSAVG00000001212	-	94	36.538	ENSNLEG00000027255	-	82	36.301	Nomascus_leucogenys
ENSCSAVG00000001212	-	90	37.584	ENSODEG00000011370	-	74	37.838	Octodon_degus
ENSCSAVG00000001212	-	90	40.541	ENSPPAG00000029220	-	57	40.411	Pan_paniscus
ENSCSAVG00000001212	-	90	39.869	ENSPPAG00000043040	-	86	38.514	Pan_paniscus
ENSCSAVG00000001212	-	90	42.763	ENSPTRG00000043800	-	81	42.384	Pan_troglodytes
ENSCSAVG00000001212	-	88	39.474	ENSPANG00000029637	-	87	38.514	Papio_anubis
ENSCSAVG00000001212	-	90	42.763	ENSPANG00000005737	-	62	42.384	Papio_anubis
ENSCSAVG00000001212	-	90	38.667	ENSPANG00000033749	-	83	38.356	Papio_anubis
ENSCSAVG00000001212	-	90	42.105	ENSPMGG00000022372	eif4bb	79	41.722	Periophthalmus_magnuspinnatus
ENSCSAVG00000001212	-	90	42.763	ENSRROG00000028884	-	86	42.000	Rhinopithecus_roxellana
ENSCSAVG00000001212	-	90	40.268	ENSRROG00000034314	-	75	39.865	Rhinopithecus_roxellana
ENSCSAVG00000001212	-	90	36.242	ENSRROG00000030278	-	65	35.811	Rhinopithecus_roxellana
ENSCSAVG00000001212	-	96	34.395	ENSSBOG00000024773	-	64	31.973	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001212	-	88	43.624	ENSVVUG00000028016	-	84	43.243	Vulpes_vulpes
ENSCSAVG00000001212	-	90	40.132	ENSVVUG00000000336	-	60	39.735	Vulpes_vulpes