EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000001252 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
3807 bases
Position
chrreftig_62:137355-141161
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000002134IF4EPF01652.181.1e-4511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000002171-1080-ENSCSAVP00000002134231 (aa)-H2Y9Y6
Gene Model
Click here to download ENSCSAVG00000001252's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001252's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000001252-6436.601ENSCSAVG00000011078-6336.601
ENSCSAVG00000001252-6732.051ENSCSAVG00000007532-7132.051
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000001252-8454.404ENSG00000163412EIF4E310054.839Homo_sapiens
ENSCSAVG00000001252-9844.934ENSAPOG00000014276EIF4E39844.934Acanthochromis_polyacanthus
ENSCSAVG00000001252-7653.714ENSAPOG00000016094eif4e38053.714Acanthochromis_polyacanthus
ENSCSAVG00000001252-7154.217ENSAMEG00000015115EIF4E39854.217Ailuropoda_melanoleuca
ENSCSAVG00000001252-9844.589ENSACIG00000021312-9844.589Amphilophus_citrinellus
ENSCSAVG00000001252-8051.596ENSACIG00000000059eif4e39449.756Amphilophus_citrinellus
ENSCSAVG00000001252-9844.934ENSAOCG00000024717-9844.934Amphiprion_ocellaris
ENSCSAVG00000001252-7753.073ENSAOCG00000022785eif4e39349.020Amphiprion_ocellaris
ENSCSAVG00000001252-9844.934ENSAPEG00000021766-9844.934Amphiprion_percula
ENSCSAVG00000001252-7753.073ENSAPEG00000018566EIF4E38253.073Amphiprion_percula
ENSCSAVG00000001252-7851.381ENSATEG00000008530EIF4E38051.381Anabas_testudineus
ENSCSAVG00000001252-8848.276ENSATEG00000020241eif4e39348.276Anabas_testudineus
ENSCSAVG00000001252-7854.144ENSACAG00000013899EIF4E38254.144Anolis_carolinensis
ENSCSAVG00000001252-7756.425ENSANAG00000031727EIF4E39553.807Aotus_nancymaae
ENSCSAVG00000001252-9844.934ENSACLG00000022985EIF4E39844.934Astatotilapia_calliptera
ENSCSAVG00000001252-8850.725ENSAMXG00000036675eif4e39250.725Astyanax_mexicanus
ENSCSAVG00000001252-7756.983ENSBTAG00000018862EIF4E39052.451Bos_taurus
ENSCSAVG00000001252-8454.404ENSCJAG00000044237EIF4E39152.427Callithrix_jacchus
ENSCSAVG00000001252-7354.438ENSCAFG00000006445EIF4E37454.938Canis_familiaris
ENSCSAVG00000001252-5053.913ENSCAFG00020016724EIF4E39753.913Canis_lupus_dingo
ENSCSAVG00000001252-7756.983ENSCHIG00000024333EIF4E38853.571Capra_hircus
ENSCSAVG00000001252-5053.913ENSTSYG00000011259EIF4E39753.913Carlito_syrichta
ENSCSAVG00000001252-7042.593ENSCAPG00000013651EIF4E39842.593Cavia_aperea
ENSCSAVG00000001252-8155.080ENSCPOG00000000391EIF4E39752.970Cavia_porcellus
ENSCSAVG00000001252-8553.299ENSCCAG00000002248EIF4E39451.923Cebus_capucinus
ENSCSAVG00000001252-8553.299ENSCATG00000042150-9753.913Cercocebus_atys
ENSCSAVG00000001252-8746.766ENSCATG00000031817-9746.766Cercocebus_atys
ENSCSAVG00000001252-7154.601ENSCLAG00000003818EIF4E39753.043Chinchilla_lanigera
ENSCSAVG00000001252-8453.886ENSCSAG00000011556-9450.467Chlorocebus_sabaeus
ENSCSAVG00000001252-5049.565ENSCSAG00000000894-9749.565Chlorocebus_sabaeus
ENSCSAVG00000001252-7054.938ENSCHOG00000009047EIF4E39854.938Choloepus_hoffmanni
ENSCSAVG00000001252-7854.696ENSCPBG00000006415EIF4E38254.696Chrysemys_picta_bellii
ENSCSAVG00000001252-10085.837ENSCING00000000308-9985.837Ciona_intestinalis
ENSCSAVG00000001252-9148.387ENSCANG00000034117-9448.387Colobus_angolensis_palliatus
ENSCSAVG00000001252-5053.913ENSCANG00000036517-9753.913Colobus_angolensis_palliatus
ENSCSAVG00000001252-7755.866ENSCGRG00001016500Eif4e38655.866Cricetulus_griseus_chok1gshd
ENSCSAVG00000001252-7054.321ENSCGRG00000007847Eif4e38854.321Cricetulus_griseus_crigri
ENSCSAVG00000001252-7852.486ENSCSEG00000018457eif4e38252.486Cynoglossus_semilaevis
ENSCSAVG00000001252-7852.778ENSCSEG00000007779-8052.778Cynoglossus_semilaevis
ENSCSAVG00000001252-8948.325ENSCVAG00000020000-9348.325Cyprinodon_variegatus
ENSCSAVG00000001252-9050.476ENSDARG00000005078eif4e39450.476Danio_rerio
ENSCSAVG00000001252-7255.090ENSDNOG00000039475EIF4E36255.090Dasypus_novemcinctus
ENSCSAVG00000001252-7053.704ENSDORG00000006531Eif4e39853.704Dipodomys_ordii
ENSCSAVG00000001252-7952.459ENSEBUG00000005603eif4e37152.459Eptatretus_burgeri
ENSCSAVG00000001252-8454.404ENSEASG00005002204EIF4E38853.807Equus_asinus_asinus
ENSCSAVG00000001252-7756.425ENSECAG00000004471EIF4E38853.807Equus_caballus
ENSCSAVG00000001252-5954.015ENSEEUG00000008916EIF4E39754.015Erinaceus_europaeus
ENSCSAVG00000001252-8351.042ENSELUG00000019727eif4e37651.042Esox_lucius
ENSCSAVG00000001252-9047.619ENSELUG00000003543-9647.619Esox_lucius
ENSCSAVG00000001252-7755.866ENSFCAG00000025548EIF4E39753.913Felis_catus
ENSCSAVG00000001252-8849.282ENSFALG00000013420EIF4E39949.282Ficedula_albicollis
ENSCSAVG00000001252-7352.353ENSFDAG00000006089EIF4E39452.353Fukomys_damarensis
ENSCSAVG00000001252-8948.095ENSFHEG00000017632-9348.095Fundulus_heteroclitus
ENSCSAVG00000001252-7853.039ENSFHEG00000008279eif4e38553.039Fundulus_heteroclitus
ENSCSAVG00000001252-8051.630ENSGMOG00000010140eif4e38551.630Gadus_morhua
ENSCSAVG00000001252-7752.542ENSGMOG00000007389-8652.542Gadus_morhua
ENSCSAVG00000001252-8651.980ENSGALG00000007780EIF4E39751.980Gallus_gallus
ENSCSAVG00000001252-8749.010ENSGAFG00000004090eif4e39449.010Gambusia_affinis
ENSCSAVG00000001252-9846.320ENSGAFG00000009003EIF4E39846.320Gambusia_affinis
ENSCSAVG00000001252-8347.692ENSGACG00000011825-9047.692Gasterosteus_aculeatus
ENSCSAVG00000001252-8650.746ENSGACG00000003392eif4e39550.746Gasterosteus_aculeatus
ENSCSAVG00000001252-7854.696ENSGAGG00000022510EIF4E38254.696Gopherus_agassizii
ENSCSAVG00000001252-5053.913ENSGGOG00000042096-9753.913Gorilla_gorilla
ENSCSAVG00000001252-9844.934ENSHBUG00000010777EIF4E39844.934Haplochromis_burtoni
ENSCSAVG00000001252-7652.000ENSHBUG00000007849eif4e38550.267Haplochromis_burtoni
ENSCSAVG00000001252-7755.866ENSHGLG00000019560EIF4E39753.043Heterocephalus_glaber_female
ENSCSAVG00000001252-5053.043ENSHGLG00100015788EIF4E39753.043Heterocephalus_glaber_male
ENSCSAVG00000001252-8739.320ENSHCOG00000012145eif4e39239.320Hippocampus_comes
ENSCSAVG00000001252-8943.602ENSHCOG00000010757EIF4E39343.602Hippocampus_comes
ENSCSAVG00000001252-9050.000ENSIPUG00000007049eif4e39450.000Ictalurus_punctatus
ENSCSAVG00000001252-5054.783ENSSTOG00000020469EIF4E39754.783Ictidomys_tridecemlineatus
ENSCSAVG00000001252-7153.988ENSJJAG00000002638Eif4e38753.988Jaculus_jaculus
ENSCSAVG00000001252-8847.343ENSKMAG00000004316EIF4E39147.343Kryptolebias_marmoratus
ENSCSAVG00000001252-8748.768ENSKMAG00000010167eif4e39448.768Kryptolebias_marmoratus
ENSCSAVG00000001252-7852.486ENSLBEG00000008251eif4e38352.486Labrus_bergylta
ENSCSAVG00000001252-7750.838ENSLACG00000005925EIF4E38050.838Latimeria_chalumnae
ENSCSAVG00000001252-7853.591ENSLOCG00000010001eif4e38153.591Lepisosteus_oculatus
ENSCSAVG00000001252-7155.152ENSLAFG00000001998EIF4E39755.152Loxodonta_africana
ENSCSAVG00000001252-7644.000ENSMFAG00000044935-8244.000Macaca_fascicularis
ENSCSAVG00000001252-5053.913ENSMFAG00000039909EIF4E39753.913Macaca_fascicularis
ENSCSAVG00000001252-9343.439ENSMNEG00000043302-9846.667Macaca_nemestrina
ENSCSAVG00000001252-8453.886ENSMNEG00000035212-9753.913Macaca_nemestrina
ENSCSAVG00000001252-5053.913ENSMLEG00000038551-9753.913Mandrillus_leucophaeus
ENSCSAVG00000001252-6752.903ENSMLEG00000035876-7551.852Mandrillus_leucophaeus
ENSCSAVG00000001252-8847.291ENSMAMG00000024180EIF4E37747.291Mastacembelus_armatus
ENSCSAVG00000001252-9845.022ENSMAMG00000023426EIF4E39845.022Mastacembelus_armatus
ENSCSAVG00000001252-9844.934ENSMZEG00005008767EIF4E39844.934Maylandia_zebra
ENSCSAVG00000001252-7652.000ENSMZEG00005026251eif4e38550.267Maylandia_zebra
ENSCSAVG00000001252-7153.988ENSMGAG00000009619EIF4E39853.988Meleagris_gallopavo
ENSCSAVG00000001252-7755.866ENSMAUG00000019824Eif4e39652.217Mesocricetus_auratus
ENSCSAVG00000001252-7053.704ENSMICG00000001125EIF4E38653.704Microcebus_murinus
ENSCSAVG00000001252-7755.866ENSMOCG00000020297Eif4e38655.866Microtus_ochrogaster
ENSCSAVG00000001252-7150.920ENSMMOG00000010583EIF4E39150.920Mola_mola
ENSCSAVG00000001252-8549.510ENSMMOG00000011660eif4e39449.510Mola_mola
ENSCSAVG00000001252-8155.026ENSMODG00000003899EIF4E38355.367Monodelphis_domestica
ENSCSAVG00000001252-7850.829ENSMALG00000008769EIF4E38050.829Monopterus_albus
ENSCSAVG00000001252-7653.714ENSMALG00000010770eif4e38053.714Monopterus_albus
ENSCSAVG00000001252-7756.425MGP_CAROLIEiJ_G0028685Eif4e39055.319Mus_caroli
ENSCSAVG00000001252-8155.851ENSMUSG00000093661Eif4e39753.731Mus_musculus
ENSCSAVG00000001252-8654.726MGP_PahariEiJ_G0022436Eif4e39754.726Mus_pahari
ENSCSAVG00000001252-8155.851MGP_SPRETEiJ_G0029713Eif4e39753.731Mus_spretus
ENSCSAVG00000001252-7054.938ENSMPUG00000017002EIF4E36054.938Mustela_putorius_furo
ENSCSAVG00000001252-7754.144ENSMLUG00000004758EIF4E39754.144Myotis_lucifugus
ENSCSAVG00000001252-7755.866ENSNGAG00000000837Eif4e39751.980Nannospalax_galili
ENSCSAVG00000001252-9844.934ENSNBRG00000023984EIF4E39844.934Neolamprologus_brichardi
ENSCSAVG00000001252-7652.000ENSNBRG00000012239eif4e38550.267Neolamprologus_brichardi
ENSCSAVG00000001252-5053.913ENSNLEG00000002684-9753.913Nomascus_leucogenys
ENSCSAVG00000001252-7055.556ENSOPRG00000014732EIF4E39855.556Ochotona_princeps
ENSCSAVG00000001252-8453.368ENSODEG00000006191EIF4E39452.500Octodon_degus
ENSCSAVG00000001252-7652.000ENSONIG00000016959eif4e38550.267Oreochromis_niloticus
ENSCSAVG00000001252-9844.934ENSONIG00000020266EIF4E39844.934Oreochromis_niloticus
ENSCSAVG00000001252-7153.333ENSOANG00000013094EIF4E39753.333Ornithorhynchus_anatinus
ENSCSAVG00000001252-7155.828ENSOCUG00000000259EIF4E39855.828Oryctolagus_cuniculus
ENSCSAVG00000001252-8649.261ENSORLG00000013391EIF4E39449.261Oryzias_latipes
ENSCSAVG00000001252-9346.330ENSORLG00000010970-9546.330Oryzias_latipes
ENSCSAVG00000001252-9047.170ENSORLG00020003751-9347.170Oryzias_latipes_hni
ENSCSAVG00000001252-8649.754ENSORLG00020015316EIF4E39449.754Oryzias_latipes_hni
ENSCSAVG00000001252-8649.261ENSORLG00015009312EIF4E39849.261Oryzias_latipes_hsok
ENSCSAVG00000001252-9346.330ENSORLG00015021121-9546.330Oryzias_latipes_hsok
ENSCSAVG00000001252-7850.829ENSOMEG00000001240-8050.829Oryzias_melastigma
ENSCSAVG00000001252-8649.754ENSOMEG00000004650eif4e39849.754Oryzias_melastigma
ENSCSAVG00000001252-7054.938ENSOGAG00000014590EIF4E39854.938Otolemur_garnettii
ENSCSAVG00000001252-7055.215ENSOARG00000009622EIF4E39855.215Ovis_aries
ENSCSAVG00000001252-6854.430ENSPPAG00000035020-8554.140Pan_paniscus
ENSCSAVG00000001252-8453.886ENSPPRG00000004898EIF4E39753.913Panthera_pardus
ENSCSAVG00000001252-5053.913ENSPTIG00000012645EIF4E39753.913Panthera_tigris_altaica
ENSCSAVG00000001252-8454.404ENSPTRG00000015102EIF4E39450.935Pan_troglodytes
ENSCSAVG00000001252-8453.886ENSPANG00000024441-9450.467Papio_anubis
ENSCSAVG00000001252-8155.319ENSPKIG00000024547eif4e38355.319Paramormyrops_kingsleyae
ENSCSAVG00000001252-7954.945ENSPKIG00000021599-8554.945Paramormyrops_kingsleyae
ENSCSAVG00000001252-5054.783ENSPSIG00000016957EIF4E39754.783Pelodiscus_sinensis
ENSCSAVG00000001252-8550.739ENSPMGG00000009868eif4e39450.739Periophthalmus_magnuspinnatus
ENSCSAVG00000001252-8847.087ENSPMGG00000008853EIF4E39147.087Periophthalmus_magnuspinnatus
ENSCSAVG00000001252-7655.682ENSPEMG00000015380Eif4e38555.682Peromyscus_maniculatus_bairdii
ENSCSAVG00000001252-7756.425ENSPCIG00000011825EIF4E38953.535Phascolarctos_cinereus
ENSCSAVG00000001252-7851.630ENSPFOG00000007551eif4e38451.630Poecilia_formosa
ENSCSAVG00000001252-9845.455ENSPFOG00000001273-9845.455Poecilia_formosa
ENSCSAVG00000001252-8445.178ENSPLAG00000005792-9145.178Poecilia_latipinna
ENSCSAVG00000001252-7852.486ENSPLAG00000008729eif4e38452.486Poecilia_latipinna
ENSCSAVG00000001252-7852.486ENSPMEG00000009131eif4e38452.486Poecilia_mexicana
ENSCSAVG00000001252-9346.330ENSPMEG00000013473-9546.330Poecilia_mexicana
ENSCSAVG00000001252-9845.455ENSPREG00000000653EIF4E39845.455Poecilia_reticulata
ENSCSAVG00000001252-7551.445ENSPREG00000004801EIF4E37451.445Poecilia_reticulata
ENSCSAVG00000001252-7054.321ENSPPYG00000013721-9854.321Pongo_abelii
ENSCSAVG00000001252-6556.000ENSPCAG00000002861EIF4E310056.000Procavia_capensis
ENSCSAVG00000001252-5053.913ENSPCOG00000022529EIF4E39753.913Propithecus_coquereli
ENSCSAVG00000001252-6555.333ENSPVAG00000005661EIF4E310055.333Pteropus_vampyrus
ENSCSAVG00000001252-9844.934ENSPNYG00000003711-9844.934Pundamilia_nyererei
ENSCSAVG00000001252-7652.000ENSPNYG00000017704eif4e38550.267Pundamilia_nyererei
ENSCSAVG00000001252-8849.758ENSPNAG00000029186eif4e39249.758Pygocentrus_nattereri
ENSCSAVG00000001252-8154.787ENSRNOG00000010301Eif4e39753.234Rattus_norvegicus
ENSCSAVG00000001252-7155.152ENSRBIG00000028060EIF4E38555.152Rhinopithecus_bieti
ENSCSAVG00000001252-5051.304ENSRROG00000037656-9751.304Rhinopithecus_roxellana
ENSCSAVG00000001252-5053.913ENSRROG00000014883EIF4E39753.913Rhinopithecus_roxellana
ENSCSAVG00000001252-5053.913ENSSBOG00000020647EIF4E39753.913Saimiri_boliviensis_boliviensis
ENSCSAVG00000001252-7155.215ENSSHAG00000008775EIF4E39855.215Sarcophilus_harrisii
ENSCSAVG00000001252-9050.935ENSSFOG00015020539eif4e39550.935Scleropages_formosus
ENSCSAVG00000001252-7756.497ENSSFOG00015016279eif4e38354.497Scleropages_formosus
ENSCSAVG00000001252-8947.805ENSSMAG00000006112eif4e37647.805Scophthalmus_maximus
ENSCSAVG00000001252-7152.147ENSSMAG00000016095EIF4E37452.147Scophthalmus_maximus
ENSCSAVG00000001252-8350.785ENSSDUG00000020316eif4e38550.785Seriola_dumerili
ENSCSAVG00000001252-9345.872ENSSDUG00000012045EIF4E39545.872Seriola_dumerili
ENSCSAVG00000001252-7851.381ENSSLDG00000013831EIF4E38051.381Seriola_lalandi_dorsalis
ENSCSAVG00000001252-8350.785ENSSLDG00000007755eif4e38550.785Seriola_lalandi_dorsalis
ENSCSAVG00000001252-5448.000ENSSARG00000008020-9948.000Sorex_araneus
ENSCSAVG00000001252-7654.545ENSSPUG00000011580EIF4E39050.242Sphenodon_punctatus
ENSCSAVG00000001252-8153.226ENSSPAG00000019336eif4e38453.226Stegastes_partitus
ENSCSAVG00000001252-7851.381ENSSPAG00000021234EIF4E38051.381Stegastes_partitus
ENSCSAVG00000001252-8852.941ENSSSCG00000011516EIF4E39754.783Sus_scrofa
ENSCSAVG00000001252-7456.395ENSTGUG00000009923EIF4E39956.395Taeniopygia_guttata
ENSCSAVG00000001252-7851.934ENSTRUG00000022670-7951.934Takifugu_rubripes
ENSCSAVG00000001252-8847.291ENSTRUG00000020181eif4e39547.291Takifugu_rubripes
ENSCSAVG00000001252-8647.059ENSTNIG00000007358-8947.059Tetraodon_nigroviridis
ENSCSAVG00000001252-8847.783ENSTNIG00000012566eif4e39347.783Tetraodon_nigroviridis
ENSCSAVG00000001252-7049.383ENSTTRG00000005076EIF4E39849.383Tursiops_truncatus
ENSCSAVG00000001252-5053.913ENSUAMG00000027960EIF4E39753.913Ursus_americanus
ENSCSAVG00000001252-5053.913ENSUMAG00000024023EIF4E39753.913Ursus_maritimus
ENSCSAVG00000001252-7153.988ENSXETG00000015908eif4e39853.988Xenopus_tropicalis
ENSCSAVG00000001252-7152.147ENSXCOG00000010474EIF4E37152.147Xiphophorus_couchianus
ENSCSAVG00000001252-9746.053ENSXMAG00000002188EIF4E39746.053Xiphophorus_maculatus
ENSCSAVG00000001252-7852.486ENSXMAG00000024672eif4e38452.486Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us