EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4458 bases
Position: chrreftig_259:174097-178554
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002250	A_deamin	PF02137.18	3.3e-95	1	1
ENSCSAVP00000002249	A_deamin	PF02137.18	3.5e-95	1	1
ENSCSAVP00000002251	A_deamin	PF02137.18	5.7e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002287	-	1497	-	ENSCSAVP00000002249	498 (aa)	-	H2YAA1
ENSCSAVT00000002288	-	1482	-	ENSCSAVP00000002250	493 (aa)	-	H2YAA2
ENSCSAVT00000002289	-	1137	-	ENSCSAVP00000002251	379 (aa)	-	H2YAA3

Gene Model

Click here to download ENSCSAVG00000001315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001315	-	71	33.333	ENSCSAVG00000008241	-	53	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001315	-	96	33.939	ENSG00000065457	ADAT1	92	52.000	Homo_sapiens
ENSCSAVG00000001315	-	96	32.731	ENSAMEG00000005426	ADAT1	97	32.731	Ailuropoda_melanoleuca
ENSCSAVG00000001315	-	75	35.052	ENSACIG00000012000	adat1	89	35.052	Amphilophus_citrinellus
ENSCSAVG00000001315	-	88	31.548	ENSACIG00000011965	adat1	61	31.548	Amphilophus_citrinellus
ENSCSAVG00000001315	-	98	31.452	ENSAOCG00000012225	adat1	99	31.452	Amphiprion_ocellaris
ENSCSAVG00000001315	-	98	31.452	ENSAPEG00000007286	adat1	99	31.452	Amphiprion_percula
ENSCSAVG00000001315	-	85	35.347	ENSATEG00000007015	adat1	62	35.347	Anabas_testudineus
ENSCSAVG00000001315	-	98	33.078	ENSAPLG00000012379	ADAT1	99	33.078	Anas_platyrhynchos
ENSCSAVG00000001315	-	70	31.970	ENSACAG00000007555	ADAT1	59	31.970	Anolis_carolinensis
ENSCSAVG00000001315	-	96	33.936	ENSANAG00000027266	ADAT1	97	33.936	Aotus_nancymaae
ENSCSAVG00000001315	-	88	33.433	ENSACLG00000005857	adat1	64	33.433	Astatotilapia_calliptera
ENSCSAVG00000001315	-	98	32.941	ENSAMXG00000043589	adat1	93	32.941	Astyanax_mexicanus
ENSCSAVG00000001315	-	96	34.469	ENSBTAG00000015669	ADAT1	98	35.333	Bos_taurus
ENSCSAVG00000001315	-	96	33.868	ENSCJAG00000014241	ADAT1	97	33.868	Callithrix_jacchus
ENSCSAVG00000001315	-	98	33.202	ENSCAFG00000020071	ADAT1	97	33.202	Canis_familiaris
ENSCSAVG00000001315	-	98	33.006	ENSCAFG00020001703	ADAT1	97	33.006	Canis_lupus_dingo
ENSCSAVG00000001315	-	96	34.406	ENSCHIG00000022974	ADAT1	95	34.406	Capra_hircus
ENSCSAVG00000001315	-	96	33.665	ENSTSYG00000000811	ADAT1	97	33.665	Carlito_syrichta
ENSCSAVG00000001315	-	89	33.618	ENSCAPG00000014696	ADAT1	72	33.618	Cavia_aperea
ENSCSAVG00000001315	-	98	33.203	ENSCPOG00000012030	ADAT1	99	33.203	Cavia_porcellus
ENSCSAVG00000001315	-	96	33.534	ENSCCAG00000029724	ADAT1	97	33.534	Cebus_capucinus
ENSCSAVG00000001315	-	96	33.925	ENSCATG00000032587	ADAT1	97	33.925	Cercocebus_atys
ENSCSAVG00000001315	-	96	34.274	ENSCLAG00000006384	ADAT1	97	34.274	Chinchilla_lanigera
ENSCSAVG00000001315	-	96	33.333	ENSCSAG00000003669	ADAT1	97	33.333	Chlorocebus_sabaeus
ENSCSAVG00000001315	-	98	32.877	ENSCPBG00000026967	ADAT1	99	32.877	Chrysemys_picta_bellii
ENSCSAVG00000001315	-	89	55.490	ENSCING00000007695	-	98	53.125	Ciona_intestinalis
ENSCSAVG00000001315	-	96	34.337	ENSCANG00000033392	ADAT1	97	34.337	Colobus_angolensis_palliatus
ENSCSAVG00000001315	-	95	34.211	ENSCGRG00001018488	Adat1	99	33.429	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001315	-	95	34.211	ENSCGRG00000015170	Adat1	96	34.211	Cricetulus_griseus_crigri
ENSCSAVG00000001315	-	98	31.976	ENSCSEG00000021708	adat1	99	31.976	Cynoglossus_semilaevis
ENSCSAVG00000001315	-	85	31.579	ENSCVAG00000004640	adat1	60	31.269	Cyprinodon_variegatus
ENSCSAVG00000001315	-	98	32.072	ENSDARG00000061348	adat1	99	32.072	Danio_rerio
ENSCSAVG00000001315	-	96	34.870	ENSDNOG00000039016	ADAT1	97	34.870	Dasypus_novemcinctus
ENSCSAVG00000001315	-	96	33.800	ENSDORG00000004779	Adat1	97	33.800	Dipodomys_ordii
ENSCSAVG00000001315	-	87	33.030	ENSETEG00000017916	ADAT1	97	33.030	Echinops_telfairi
ENSCSAVG00000001315	-	96	33.066	ENSEASG00005013492	ADAT1	93	33.066	Equus_asinus_asinus
ENSCSAVG00000001315	-	96	32.866	ENSECAG00000009128	ADAT1	97	32.866	Equus_caballus
ENSCSAVG00000001315	-	98	32.121	ENSELUG00000012492	adat1	99	32.121	Esox_lucius
ENSCSAVG00000001315	-	96	34.000	ENSFCAG00000031932	ADAT1	97	35.731	Felis_catus
ENSCSAVG00000001315	-	98	33.656	ENSFALG00000002524	ADAT1	99	33.656	Ficedula_albicollis
ENSCSAVG00000001315	-	96	32.932	ENSFDAG00000019304	ADAT1	97	32.932	Fukomys_damarensis
ENSCSAVG00000001315	-	98	30.522	ENSFHEG00000020413	adat1	99	30.522	Fundulus_heteroclitus
ENSCSAVG00000001315	-	98	31.311	ENSGALG00000000908	ADAT1	99	31.311	Gallus_gallus
ENSCSAVG00000001315	-	98	30.723	ENSGAFG00000021954	adat1	97	30.677	Gambusia_affinis
ENSCSAVG00000001315	-	85	33.333	ENSGACG00000002177	adat1	63	33.333	Gasterosteus_aculeatus
ENSCSAVG00000001315	-	98	33.398	ENSGAGG00000023840	ADAT1	99	33.398	Gopherus_agassizii
ENSCSAVG00000001315	-	96	33.737	ENSGGOG00000014665	ADAT1	97	33.737	Gorilla_gorilla
ENSCSAVG00000001315	-	88	33.929	ENSHBUG00000023160	adat1	65	33.929	Haplochromis_burtoni
ENSCSAVG00000001315	-	98	31.154	ENSHCOG00000006772	adat1	99	31.164	Hippocampus_comes
ENSCSAVG00000001315	-	98	31.781	ENSIPUG00000008416	adat1	99	31.781	Ictalurus_punctatus
ENSCSAVG00000001315	-	96	34.531	ENSSTOG00000022627	ADAT1	97	34.531	Ictidomys_tridecemlineatus
ENSCSAVG00000001315	-	98	31.781	ENSKMAG00000016307	adat1	99	31.781	Kryptolebias_marmoratus
ENSCSAVG00000001315	-	85	33.642	ENSLBEG00000007725	-	92	31.336	Labrus_bergylta
ENSCSAVG00000001315	-	85	33.642	ENSLBEG00000027434	adat1	76	31.163	Labrus_bergylta
ENSCSAVG00000001315	-	67	32.222	ENSLACG00000007761	ADAT1	99	30.337	Latimeria_chalumnae
ENSCSAVG00000001315	-	96	32.929	ENSLAFG00000000865	ADAT1	97	32.929	Loxodonta_africana
ENSCSAVG00000001315	-	96	33.936	ENSMFAG00000026786	ADAT1	97	33.936	Macaca_fascicularis
ENSCSAVG00000001315	-	96	33.936	ENSMMUG00000005751	ADAT1	97	33.936	Macaca_mulatta
ENSCSAVG00000001315	-	96	33.936	ENSMNEG00000032840	ADAT1	97	33.936	Macaca_nemestrina
ENSCSAVG00000001315	-	96	34.337	ENSMLEG00000041477	ADAT1	97	34.337	Mandrillus_leucophaeus
ENSCSAVG00000001315	-	98	30.934	ENSMAMG00000013028	adat1	98	30.934	Mastacembelus_armatus
ENSCSAVG00000001315	-	88	33.333	ENSMZEG00005015291	adat1	65	33.333	Maylandia_zebra
ENSCSAVG00000001315	-	89	36.522	ENSMAUG00000009647	Adat1	92	34.205	Mesocricetus_auratus
ENSCSAVG00000001315	-	96	34.008	ENSMICG00000011987	ADAT1	97	34.008	Microcebus_murinus
ENSCSAVG00000001315	-	95	35.091	ENSMOCG00000018424	Adat1	96	35.091	Microtus_ochrogaster
ENSCSAVG00000001315	-	85	34.365	ENSMMOG00000010638	adat1	63	34.365	Mola_mola
ENSCSAVG00000001315	-	98	32.087	ENSMODG00000002203	ADAT1	99	32.087	Monodelphis_domestica
ENSCSAVG00000001315	-	98	31.890	ENSMALG00000008062	adat1	99	31.890	Monopterus_albus
ENSCSAVG00000001315	-	95	34.400	MGP_CAROLIEiJ_G0031587	Adat1	98	35.684	Mus_caroli
ENSCSAVG00000001315	-	95	34.898	ENSMUSG00000031949	Adat1	98	36.245	Mus_musculus
ENSCSAVG00000001315	-	96	33.992	MGP_PahariEiJ_G0023185	Adat1	98	35.408	Mus_pahari
ENSCSAVG00000001315	-	96	34.055	MGP_SPRETEiJ_G0032705	Adat1	98	35.684	Mus_spretus
ENSCSAVG00000001315	-	96	32.871	ENSMPUG00000009882	ADAT1	95	32.871	Mustela_putorius_furo
ENSCSAVG00000001315	-	94	35.135	ENSMLUG00000024071	-	97	32.129	Myotis_lucifugus
ENSCSAVG00000001315	-	96	34.068	ENSMLUG00000015114	-	97	34.068	Myotis_lucifugus
ENSCSAVG00000001315	-	96	34.469	ENSNGAG00000019449	Adat1	97	34.469	Nannospalax_galili
ENSCSAVG00000001315	-	88	33.631	ENSNBRG00000003827	adat1	64	33.631	Neolamprologus_brichardi
ENSCSAVG00000001315	-	96	33.333	ENSNLEG00000013060	ADAT1	97	33.333	Nomascus_leucogenys
ENSCSAVG00000001315	-	91	30.312	ENSMEUG00000004823	ADAT1	70	30.312	Notamacropus_eugenii
ENSCSAVG00000001315	-	96	33.535	ENSOPRG00000012530	ADAT1	97	33.535	Ochotona_princeps
ENSCSAVG00000001315	-	98	32.505	ENSOANG00000008178	ADAT1	96	32.505	Ornithorhynchus_anatinus
ENSCSAVG00000001315	-	96	32.661	ENSOCUG00000015540	ADAT1	97	32.661	Oryctolagus_cuniculus
ENSCSAVG00000001315	-	98	32.530	ENSORLG00000015148	adat1	99	32.530	Oryzias_latipes
ENSCSAVG00000001315	-	98	30.980	ENSORLG00020013336	adat1	99	30.980	Oryzias_latipes_hni
ENSCSAVG00000001315	-	98	31.373	ENSORLG00015003577	adat1	99	31.373	Oryzias_latipes_hsok
ENSCSAVG00000001315	-	98	32.157	ENSOMEG00000019510	adat1	99	32.157	Oryzias_melastigma
ENSCSAVG00000001315	-	96	32.866	ENSOGAG00000005899	ADAT1	97	32.866	Otolemur_garnettii
ENSCSAVG00000001315	-	96	34.669	ENSOARG00000006898	ADAT1	97	34.669	Ovis_aries
ENSCSAVG00000001315	-	96	33.737	ENSPPAG00000035006	ADAT1	97	33.737	Pan_paniscus
ENSCSAVG00000001315	-	96	34.000	ENSPPRG00000002924	ADAT1	97	34.000	Panthera_pardus
ENSCSAVG00000001315	-	96	34.000	ENSPTIG00000008308	ADAT1	97	34.000	Panthera_tigris_altaica
ENSCSAVG00000001315	-	96	34.531	ENSPTRG00000008363	ADAT1	97	34.531	Pan_troglodytes
ENSCSAVG00000001315	-	96	33.936	ENSPANG00000015739	ADAT1	97	33.936	Papio_anubis
ENSCSAVG00000001315	-	82	42.857	ENSPKIG00000004925	adat1	69	41.317	Paramormyrops_kingsleyae
ENSCSAVG00000001315	-	98	32.184	ENSPSIG00000010286	ADAT1	99	32.184	Pelodiscus_sinensis
ENSCSAVG00000001315	-	98	31.515	ENSPMGG00000021265	adat1	96	31.515	Periophthalmus_magnuspinnatus
ENSCSAVG00000001315	-	95	33.996	ENSPEMG00000013185	Adat1	96	33.996	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001315	-	98	34.971	ENSPMAG00000003955	adat1	99	34.971	Petromyzon_marinus
ENSCSAVG00000001315	-	98	32.143	ENSPCIG00000010759	ADAT1	99	32.143	Phascolarctos_cinereus
ENSCSAVG00000001315	-	98	30.488	ENSPFOG00000003012	adat1	63	33.642	Poecilia_formosa
ENSCSAVG00000001315	-	90	31.264	ENSPLAG00000019711	adat1	63	30.310	Poecilia_latipinna
ENSCSAVG00000001315	-	90	30.820	ENSPMEG00000001784	adat1	87	30.820	Poecilia_mexicana
ENSCSAVG00000001315	-	90	30.702	ENSPREG00000003181	adat1	99	30.020	Poecilia_reticulata
ENSCSAVG00000001315	-	89	36.207	ENSPPYG00000007566	ADAT1	97	34.879	Pongo_abelii
ENSCSAVG00000001315	-	77	47.059	ENSPCAG00000010651	ADAT1	79	47.059	Procavia_capensis
ENSCSAVG00000001315	-	96	32.797	ENSPCOG00000017311	ADAT1	97	32.797	Propithecus_coquereli
ENSCSAVG00000001315	-	96	32.389	ENSPVAG00000006747	ADAT1	97	32.389	Pteropus_vampyrus
ENSCSAVG00000001315	-	88	32.938	ENSPNYG00000003974	adat1	65	32.938	Pundamilia_nyererei
ENSCSAVG00000001315	-	98	35.031	ENSPNAG00000017166	adat1	95	35.031	Pygocentrus_nattereri
ENSCSAVG00000001315	-	95	34.280	ENSRNOG00000019434	Adat1	95	34.280	Rattus_norvegicus
ENSCSAVG00000001315	-	96	34.538	ENSRBIG00000035278	ADAT1	97	34.538	Rhinopithecus_bieti
ENSCSAVG00000001315	-	96	34.538	ENSRROG00000041834	ADAT1	97	34.538	Rhinopithecus_roxellana
ENSCSAVG00000001315	-	96	34.137	ENSSBOG00000017477	ADAT1	97	34.137	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001315	-	58	31.897	ENSSHAG00000002356	ADAT1	57	31.897	Sarcophilus_harrisii
ENSCSAVG00000001315	-	98	31.504	ENSSDUG00000003575	adat1	99	31.504	Seriola_dumerili
ENSCSAVG00000001315	-	98	31.098	ENSSLDG00000003816	adat1	99	31.098	Seriola_lalandi_dorsalis
ENSCSAVG00000001315	-	98	30.214	ENSSPUG00000004954	ADAT1	99	30.214	Sphenodon_punctatus
ENSCSAVG00000001315	-	89	30.172	ENSSPAG00000004961	adat1	64	30.473	Stegastes_partitus
ENSCSAVG00000001315	-	96	34.205	ENSSSCG00000002706	ADAT1	96	35.824	Sus_scrofa
ENSCSAVG00000001315	-	98	32.955	ENSTGUG00000008449	ADAT1	99	32.955	Taeniopygia_guttata
ENSCSAVG00000001315	-	96	31.313	ENSTRUG00000003122	adat1	96	31.313	Takifugu_rubripes
ENSCSAVG00000001315	-	85	34.132	ENSTNIG00000008848	adat1	97	30.612	Tetraodon_nigroviridis
ENSCSAVG00000001315	-	98	33.268	ENSTTRG00000001220	ADAT1	99	33.268	Tursiops_truncatus
ENSCSAVG00000001315	-	96	32.803	ENSUMAG00000014551	ADAT1	92	33.404	Ursus_maritimus
ENSCSAVG00000001315	-	98	30.588	ENSVPAG00000003715	ADAT1	99	30.588	Vicugna_pacos
ENSCSAVG00000001315	-	98	33.006	ENSVVUG00000024326	ADAT1	97	33.006	Vulpes_vulpes
ENSCSAVG00000001315	-	96	32.432	ENSXETG00000003571	adat1	96	32.238	Xenopus_tropicalis
ENSCSAVG00000001315	-	98	30.279	ENSXCOG00000020759	adat1	99	31.000	Xiphophorus_couchianus
ENSCSAVG00000001315	-	98	31.062	ENSXMAG00000016043	adat1	99	31.062	Xiphophorus_maculatus