EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001323 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1382 bases
Position: chrreftig_37:135407-136788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002260	Ribosomal_S27	PF01599.19	7.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002298	-	471	-	ENSCSAVP00000002260	156 (aa)	-	H2YAB2

Gene Model

Click here to download ENSCSAVG00000001323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001323	-	95	81.169	ENSAPOG00000022780	rps27a	99	81.169	Acanthochromis_polyacanthus
ENSCSAVG00000001323	-	95	81.169	ENSAOCG00000000282	rps27a	99	81.169	Amphiprion_ocellaris
ENSCSAVG00000001323	-	95	81.169	ENSAPEG00000010300	rps27a	99	81.169	Amphiprion_percula
ENSCSAVG00000001323	-	93	81.333	ENSATEG00000021507	rps27a	96	81.333	Anabas_testudineus
ENSCSAVG00000001323	-	95	81.169	ENSAMXG00000040689	rps27a	99	81.169	Astyanax_mexicanus
ENSCSAVG00000001323	-	69	91.667	ENSCJAG00000046243	-	92	91.667	Callithrix_jacchus
ENSCSAVG00000001323	-	95	81.169	ENSTSYG00000000845	-	99	81.169	Carlito_syrichta
ENSCSAVG00000001323	-	96	86.452	ENSCING00000005834	r27a	100	86.452	Ciona_intestinalis
ENSCSAVG00000001323	-	95	69.128	ENSCGRG00001008358	-	98	67.114	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001323	-	95	81.169	ENSCSEG00000001603	rps27a	99	81.169	Cynoglossus_semilaevis
ENSCSAVG00000001323	-	95	81.169	ENSCVAG00000004811	rps27a	85	81.169	Cyprinodon_variegatus
ENSCSAVG00000001323	-	95	81.169	ENSDARG00000032725	rps27a	99	81.169	Danio_rerio
ENSCSAVG00000001323	-	95	80.519	FBgn0003942	RpS27A	99	80.519	Drosophila_melanogaster
ENSCSAVG00000001323	-	95	79.221	ENSEBUG00000007396	rps27a	99	79.221	Eptatretus_burgeri
ENSCSAVG00000001323	-	95	81.169	ENSELUG00000004527	rps27a	99	81.169	Esox_lucius
ENSCSAVG00000001323	-	95	81.169	ENSFHEG00000001180	rps27a	99	81.169	Fundulus_heteroclitus
ENSCSAVG00000001323	-	95	81.169	ENSGMOG00000011896	rps27a	90	81.169	Gadus_morhua
ENSCSAVG00000001323	-	95	81.169	ENSGAFG00000014202	rps27a	99	81.169	Gambusia_affinis
ENSCSAVG00000001323	-	95	81.169	ENSGACG00000011558	rps27a	99	81.169	Gasterosteus_aculeatus
ENSCSAVG00000001323	-	95	81.169	ENSHBUG00000003375	rps27a	99	81.169	Haplochromis_burtoni
ENSCSAVG00000001323	-	95	81.169	ENSHCOG00000019712	rps27a	99	81.169	Hippocampus_comes
ENSCSAVG00000001323	-	95	81.169	ENSIPUG00000015317	rps27a	99	81.169	Ictalurus_punctatus
ENSCSAVG00000001323	-	95	81.169	ENSKMAG00000003156	rps27a	99	81.169	Kryptolebias_marmoratus
ENSCSAVG00000001323	-	95	81.169	ENSLBEG00000000541	rps27a	99	81.169	Labrus_bergylta
ENSCSAVG00000001323	-	95	81.169	ENSLACG00000007672	rps27a	99	81.169	Latimeria_chalumnae
ENSCSAVG00000001323	-	95	81.169	ENSLOCG00000015551	rps27a	95	81.169	Lepisosteus_oculatus
ENSCSAVG00000001323	-	95	79.870	ENSMNEG00000026442	-	99	79.870	Macaca_nemestrina
ENSCSAVG00000001323	-	85	81.884	ENSMLEG00000003375	-	100	81.884	Mandrillus_leucophaeus
ENSCSAVG00000001323	-	95	81.169	ENSMAMG00000022556	rps27a	99	81.169	Mastacembelus_armatus
ENSCSAVG00000001323	-	95	81.169	ENSMZEG00005004484	rps27a	99	81.169	Maylandia_zebra
ENSCSAVG00000001323	-	95	81.818	ENSMMOG00000007733	rps27a	99	81.818	Mola_mola
ENSCSAVG00000001323	-	95	81.169	ENSMALG00000014759	rps27a	99	81.169	Monopterus_albus
ENSCSAVG00000001323	-	95	81.169	ENSNBRG00000010708	rps27a	99	81.169	Neolamprologus_brichardi
ENSCSAVG00000001323	-	95	81.169	ENSONIG00000016075	rps27a	95	81.169	Oreochromis_niloticus
ENSCSAVG00000001323	-	95	81.169	ENSORLG00000029546	rps27a	99	81.169	Oryzias_latipes
ENSCSAVG00000001323	-	95	70.225	ENSORLG00020017665	-	99	70.225	Oryzias_latipes_hni
ENSCSAVG00000001323	-	95	81.169	ENSORLG00015003772	rps27a	99	81.169	Oryzias_latipes_hsok
ENSCSAVG00000001323	-	95	81.169	ENSOMEG00000022866	rps27a	99	81.169	Oryzias_melastigma
ENSCSAVG00000001323	-	89	75.694	ENSOGAG00000029795	-	92	72.222	Otolemur_garnettii
ENSCSAVG00000001323	-	95	77.922	ENSOARG00000014935	-	89	74.026	Ovis_aries
ENSCSAVG00000001323	-	95	80.519	ENSPPAG00000023609	-	99	80.519	Pan_paniscus
ENSCSAVG00000001323	-	95	81.169	ENSPTRG00000023227	-	99	81.169	Pan_troglodytes
ENSCSAVG00000001323	-	95	81.169	ENSPKIG00000021492	rps27a	99	81.169	Paramormyrops_kingsleyae
ENSCSAVG00000001323	-	73	78.333	ENSPMAG00000006335	-	98	78.333	Petromyzon_marinus
ENSCSAVG00000001323	-	95	81.169	ENSPFOG00000013152	rps27a	99	81.169	Poecilia_formosa
ENSCSAVG00000001323	-	95	81.169	ENSPLAG00000012639	rps27a	99	81.169	Poecilia_latipinna
ENSCSAVG00000001323	-	95	81.169	ENSPMEG00000015419	rps27a	99	81.169	Poecilia_mexicana
ENSCSAVG00000001323	-	95	81.169	ENSPREG00000012478	rps27a	99	81.169	Poecilia_reticulata
ENSCSAVG00000001323	-	91	81.633	ENSPVAG00000016471	-	97	81.633	Pteropus_vampyrus
ENSCSAVG00000001323	-	95	81.169	ENSPNYG00000019989	rps27a	99	81.169	Pundamilia_nyererei
ENSCSAVG00000001323	-	95	81.169	ENSPNAG00000002903	rps27a	99	81.169	Pygocentrus_nattereri
ENSCSAVG00000001323	-	92	78.378	YLR167W	RPS31	97	78.378	Saccharomyces_cerevisiae
ENSCSAVG00000001323	-	95	81.169	ENSSFOG00015017733	rps27a	87	81.169	Scleropages_formosus
ENSCSAVG00000001323	-	95	81.169	ENSSMAG00000004941	rps27a	99	81.169	Scophthalmus_maximus
ENSCSAVG00000001323	-	95	81.169	ENSSDUG00000003170	rps27a	99	81.169	Seriola_dumerili
ENSCSAVG00000001323	-	94	81.208	ENSSLDG00000001310	-	97	81.757	Seriola_lalandi_dorsalis
ENSCSAVG00000001323	-	95	81.169	ENSSPAG00000022744	rps27a	99	81.169	Stegastes_partitus
ENSCSAVG00000001323	-	95	81.169	ENSTRUG00000010963	rps27a	99	81.169	Takifugu_rubripes
ENSCSAVG00000001323	-	85	78.986	ENSTNIG00000018689	rps27a	99	78.986	Tetraodon_nigroviridis
ENSCSAVG00000001323	-	95	81.169	ENSXCOG00000003780	rps27a	99	81.169	Xiphophorus_couchianus
ENSCSAVG00000001323	-	95	81.169	ENSXMAG00000000171	rps27a	99	81.169	Xiphophorus_maculatus