EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001337 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 14342 bases
Position: chrreftig_91:1333441-1347782
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002290	2OG-FeII_Oxy	PF03171.20	7.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002328	-	748	-	ENSCSAVP00000002290	242 (aa)	-	H2YAE2
ENSCSAVT00000002327	-	315	-	ENSCSAVP00000002289	98 (aa)	-	H2YAE1

Gene Model

Click here to download ENSCSAVG00000001337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001337	-	100	81.818	ENSCSAVG00000000201	-	75	81.818
ENSCSAVG00000001337	-	99	41.494	ENSCSAVG00000004616	-	74	41.494

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001337	-	82	37.379	ENSAPOG00000011678	si:dkey-10o6.2	70	37.379	Acanthochromis_polyacanthus
ENSCSAVG00000001337	-	99	34.274	ENSACIG00000011675	-	77	34.274	Amphilophus_citrinellus
ENSCSAVG00000001337	-	99	34.413	ENSACIG00000024115	si:dkey-10o6.2	76	34.413	Amphilophus_citrinellus
ENSCSAVG00000001337	-	99	36.032	ENSAOCG00000013068	si:dkey-10o6.2	77	36.032	Amphiprion_ocellaris
ENSCSAVG00000001337	-	99	36.032	ENSAPEG00000011246	si:dkey-10o6.2	78	36.032	Amphiprion_percula
ENSCSAVG00000001337	-	99	35.223	ENSATEG00000021952	si:dkey-10o6.2	77	35.223	Anabas_testudineus
ENSCSAVG00000001337	-	99	34.413	ENSATEG00000021945	si:dkey-10o6.2	77	34.413	Anabas_testudineus
ENSCSAVG00000001337	-	99	34.413	ENSATEG00000000030	si:dkey-10o6.2	77	34.413	Anabas_testudineus
ENSCSAVG00000001337	-	99	34.008	ENSACLG00000023011	si:dkey-10o6.2	77	34.008	Astatotilapia_calliptera
ENSCSAVG00000001337	-	99	35.918	ENSAMXG00000021555	si:dkey-10o6.2	77	35.918	Astyanax_mexicanus
ENSCSAVG00000001337	-	99	42.562	ENSCING00000016920	-	71	42.562	Ciona_intestinalis
ENSCSAVG00000001337	-	99	39.256	ENSCING00000007255	-	73	39.256	Ciona_intestinalis
ENSCSAVG00000001337	-	99	60.166	ENSCING00000012500	-	75	60.166	Ciona_intestinalis
ENSCSAVG00000001337	-	90	44.495	ENSCING00000011926	-	92	44.495	Ciona_intestinalis
ENSCSAVG00000001337	-	99	50.417	ENSCING00000022311	-	75	50.417	Ciona_intestinalis
ENSCSAVG00000001337	-	99	33.469	ENSCSEG00000000918	si:dkey-10o6.2	78	33.469	Cynoglossus_semilaevis
ENSCSAVG00000001337	-	99	32.520	ENSCSEG00000000927	si:dkey-10o6.2	77	32.520	Cynoglossus_semilaevis
ENSCSAVG00000001337	-	99	36.842	ENSCVAG00000015074	si:dkey-10o6.2	77	36.842	Cyprinodon_variegatus
ENSCSAVG00000001337	-	99	35.102	ENSDARG00000074628	si:dkey-10o6.2	67	35.102	Danio_rerio
ENSCSAVG00000001337	-	99	32.794	ENSELUG00000003488	si:dkey-10o6.2	78	32.794	Esox_lucius
ENSCSAVG00000001337	-	99	35.366	ENSFHEG00000019035	si:dkey-10o6.2	77	35.366	Fundulus_heteroclitus
ENSCSAVG00000001337	-	99	36.585	ENSGMOG00000018989	si:dkey-10o6.2	79	36.585	Gadus_morhua
ENSCSAVG00000001337	-	99	34.413	ENSGAFG00000006137	si:dkey-10o6.2	78	34.413	Gambusia_affinis
ENSCSAVG00000001337	-	99	33.333	ENSGACG00000006806	si:dkey-10o6.2	78	33.333	Gasterosteus_aculeatus
ENSCSAVG00000001337	-	99	34.413	ENSHBUG00000008853	si:dkey-10o6.2	77	34.413	Haplochromis_burtoni
ENSCSAVG00000001337	-	99	36.032	ENSHCOG00000017626	si:dkey-10o6.2	77	36.032	Hippocampus_comes
ENSCSAVG00000001337	-	99	35.223	ENSHCOG00000017671	-	77	35.223	Hippocampus_comes
ENSCSAVG00000001337	-	99	34.818	ENSIPUG00000018911	-	78	34.818	Ictalurus_punctatus
ENSCSAVG00000001337	-	99	34.008	ENSIPUG00000018879	si:dkey-10o6.2	71	33.740	Ictalurus_punctatus
ENSCSAVG00000001337	-	99	31.837	ENSKMAG00000006197	si:dkey-10o6.2	77	31.837	Kryptolebias_marmoratus
ENSCSAVG00000001337	-	99	35.510	ENSLBEG00000003839	si:dkey-10o6.2	78	35.510	Labrus_bergylta
ENSCSAVG00000001337	-	99	33.469	ENSLBEG00000003823	si:dkey-10o6.2	70	33.469	Labrus_bergylta
ENSCSAVG00000001337	-	99	33.603	ENSMAMG00000023020	si:dkey-10o6.2	78	33.603	Mastacembelus_armatus
ENSCSAVG00000001337	-	99	33.735	ENSMAMG00000023022	si:dkey-10o6.2	78	33.735	Mastacembelus_armatus
ENSCSAVG00000001337	-	99	33.198	ENSMAMG00000023025	-	78	33.198	Mastacembelus_armatus
ENSCSAVG00000001337	-	99	32.389	ENSMAMG00000023026	-	78	32.389	Mastacembelus_armatus
ENSCSAVG00000001337	-	99	34.008	ENSMZEG00005012018	si:dkey-10o6.2	77	34.008	Maylandia_zebra
ENSCSAVG00000001337	-	92	35.242	ENSMMOG00000020383	si:dkey-10o6.2	69	35.242	Mola_mola
ENSCSAVG00000001337	-	99	34.940	ENSMALG00000011300	si:dkey-10o6.2	78	34.940	Monopterus_albus
ENSCSAVG00000001337	-	99	34.818	ENSNBRG00000015840	si:dkey-10o6.2	83	34.818	Neolamprologus_brichardi
ENSCSAVG00000001337	-	99	35.223	ENSONIG00000015572	si:dkey-10o6.2	77	35.223	Oreochromis_niloticus
ENSCSAVG00000001337	-	99	34.146	ENSORLG00000001314	si:dkey-10o6.2	77	34.146	Oryzias_latipes
ENSCSAVG00000001337	-	99	34.008	ENSORLG00020002660	si:dkey-10o6.2	77	34.008	Oryzias_latipes_hni
ENSCSAVG00000001337	-	99	35.366	ENSOMEG00000003617	si:dkey-10o6.2	75	35.366	Oryzias_melastigma
ENSCSAVG00000001337	-	99	36.214	ENSPKIG00000024109	-	76	36.214	Paramormyrops_kingsleyae
ENSCSAVG00000001337	-	99	37.143	ENSPKIG00000004183	si:dkey-10o6.2	68	37.143	Paramormyrops_kingsleyae
ENSCSAVG00000001337	-	99	38.115	ENSPKIG00000004206	si:dkey-10o6.2	62	38.115	Paramormyrops_kingsleyae
ENSCSAVG00000001337	-	99	30.769	ENSPMGG00000021603	si:dkey-10o6.2	77	31.579	Periophthalmus_magnuspinnatus
ENSCSAVG00000001337	-	99	33.198	ENSPFOG00000017244	si:dkey-10o6.2	77	33.198	Poecilia_formosa
ENSCSAVG00000001337	-	99	33.198	ENSPLAG00000008037	si:dkey-10o6.2	78	33.198	Poecilia_latipinna
ENSCSAVG00000001337	-	64	33.974	ENSPMEG00000020748	si:dkey-10o6.2	67	33.974	Poecilia_mexicana
ENSCSAVG00000001337	-	99	32.520	ENSPREG00000005108	si:dkey-10o6.2	77	32.520	Poecilia_reticulata
ENSCSAVG00000001337	-	99	34.008	ENSPNYG00000010698	si:dkey-10o6.2	77	34.008	Pundamilia_nyererei
ENSCSAVG00000001337	-	89	31.818	ENSPNAG00000014485	-	65	31.818	Pygocentrus_nattereri
ENSCSAVG00000001337	-	99	34.677	ENSPNAG00000014123	si:dkey-10o6.2	76	34.677	Pygocentrus_nattereri
ENSCSAVG00000001337	-	99	34.016	ENSSFOG00015015345	si:dkey-10o6.2	78	34.016	Scleropages_formosus
ENSCSAVG00000001337	-	99	35.918	ENSSMAG00000019016	si:dkey-10o6.2	77	35.918	Scophthalmus_maximus
ENSCSAVG00000001337	-	99	36.842	ENSSDUG00000000943	si:dkey-10o6.2	77	36.842	Seriola_dumerili
ENSCSAVG00000001337	-	99	37.247	ENSSLDG00000003462	si:dkey-10o6.2	77	37.247	Seriola_lalandi_dorsalis
ENSCSAVG00000001337	-	99	37.652	ENSSPAG00000020962	si:dkey-10o6.2	77	37.652	Stegastes_partitus
ENSCSAVG00000001337	-	99	34.400	ENSTRUG00000019532	si:dkey-10o6.2	77	34.400	Takifugu_rubripes
ENSCSAVG00000001337	-	99	31.984	ENSXCOG00000000855	si:dkey-10o6.2	78	31.984	Xiphophorus_couchianus
ENSCSAVG00000001337	-	99	32.794	ENSXMAG00000012432	si:dkey-10o6.2	78	32.794	Xiphophorus_maculatus