EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001356 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4392 bases
Position: chrreftig_5:1678883-1683274
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002318	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002356	-	945	-	ENSCSAVP00000002318	241 (aa)	-	H2YAH0

Gene Model

Click here to download ENSCSAVG00000001356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001356	-	68	38.235	ENSCSAVG00000002804	-	81	38.235
ENSCSAVG00000001356	-	65	36.646	ENSCSAVG00000007813	-	61	36.646
ENSCSAVG00000001356	-	77	35.979	ENSCSAVG00000010245	-	67	35.979
ENSCSAVG00000001356	-	69	37.349	ENSCSAVG00000002088	-	78	37.349
ENSCSAVG00000001356	-	64	37.107	ENSCSAVG00000005689	-	76	37.107
ENSCSAVG00000001356	-	67	33.333	ENSCSAVG00000009503	-	80	33.962
ENSCSAVG00000001356	-	65	32.278	ENSCSAVG00000005450	-	70	32.278
ENSCSAVG00000001356	-	65	39.873	ENSCSAVG00000008684	-	75	39.873
ENSCSAVG00000001356	-	67	33.951	ENSCSAVG00000005120	-	68	33.951
ENSCSAVG00000001356	-	78	36.598	ENSCSAVG00000000613	-	85	40.580
ENSCSAVG00000001356	-	66	32.317	ENSCSAVG00000006409	-	61	32.317
ENSCSAVG00000001356	-	72	35.838	ENSCSAVG00000009147	-	80	37.805
ENSCSAVG00000001356	-	63	38.411	ENSCSAVG00000008995	-	94	38.411
ENSCSAVG00000001356	-	64	34.194	ENSCSAVG00000006042	-	73	34.194
ENSCSAVG00000001356	-	65	42.038	ENSCSAVG00000009128	-	75	42.038
ENSCSAVG00000001356	-	66	37.423	ENSCSAVG00000011162	-	79	37.423
ENSCSAVG00000001356	-	63	35.948	ENSCSAVG00000000160	-	71	35.948
ENSCSAVG00000001356	-	71	40.116	ENSCSAVG00000010348	-	86	40.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001356	-	99	65.546	ENSG00000112210	RAB23	99	65.126	Homo_sapiens
ENSCSAVG00000001356	-	99	63.445	ENSAPOG00000008892	rab23	99	63.445	Acanthochromis_polyacanthus
ENSCSAVG00000001356	-	99	64.854	ENSAMEG00000006825	RAB23	99	63.866	Ailuropoda_melanoleuca
ENSCSAVG00000001356	-	100	59.751	ENSACIG00000020496	rab23	100	59.336	Amphilophus_citrinellus
ENSCSAVG00000001356	-	100	62.656	ENSAOCG00000004234	rab23	100	62.656	Amphiprion_ocellaris
ENSCSAVG00000001356	-	100	62.656	ENSAPEG00000019758	rab23	100	62.656	Amphiprion_percula
ENSCSAVG00000001356	-	100	63.223	ENSATEG00000020913	rab23	100	63.071	Anabas_testudineus
ENSCSAVG00000001356	-	74	73.596	ENSAPLG00000003715	RAB23	100	73.596	Anas_platyrhynchos
ENSCSAVG00000001356	-	99	64.017	ENSACAG00000006656	RAB23	99	62.185	Anolis_carolinensis
ENSCSAVG00000001356	-	99	64.706	ENSANAG00000027052	-	99	64.286	Aotus_nancymaae
ENSCSAVG00000001356	-	100	64.050	ENSACLG00000002819	rab23	100	63.900	Astatotilapia_calliptera
ENSCSAVG00000001356	-	100	63.071	ENSAMXG00000014960	rab23	100	63.071	Astyanax_mexicanus
ENSCSAVG00000001356	-	99	64.435	ENSBTAG00000005362	RAB23	99	63.445	Bos_taurus
ENSCSAVG00000001356	-	99	64.706	ENSCJAG00000010247	RAB23	99	64.286	Callithrix_jacchus
ENSCSAVG00000001356	-	99	64.017	ENSCAFG00000002459	RAB23	99	63.025	Canis_familiaris
ENSCSAVG00000001356	-	99	64.017	ENSCAFG00020015900	RAB23	99	63.025	Canis_lupus_dingo
ENSCSAVG00000001356	-	99	64.435	ENSCHIG00000009815	RAB23	99	63.445	Capra_hircus
ENSCSAVG00000001356	-	100	64.876	ENSTSYG00000029126	RAB23	100	63.071	Carlito_syrichta
ENSCSAVG00000001356	-	99	65.417	ENSCPOG00000030218	RAB23	99	63.445	Cavia_porcellus
ENSCSAVG00000001356	-	99	64.286	ENSCCAG00000020364	RAB23	99	63.866	Cebus_capucinus
ENSCSAVG00000001356	-	99	65.690	ENSCATG00000027876	RAB23	99	64.286	Cercocebus_atys
ENSCSAVG00000001356	-	99	64.315	ENSCLAG00000000797	RAB23	99	63.445	Chinchilla_lanigera
ENSCSAVG00000001356	-	99	66.109	ENSCSAG00000013438	RAB23	99	64.706	Chlorocebus_sabaeus
ENSCSAVG00000001356	-	99	62.605	ENSCPBG00000022640	RAB23	99	62.185	Chrysemys_picta_bellii
ENSCSAVG00000001356	-	100	84.362	ENSCING00000001155	-	100	83.128	Ciona_intestinalis
ENSCSAVG00000001356	-	99	65.272	ENSCANG00000031065	RAB23	99	63.866	Colobus_angolensis_palliatus
ENSCSAVG00000001356	-	99	64.854	ENSCGRG00001008994	Rab23	99	64.286	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001356	-	98	63.866	ENSCGRG00000013630	Rab23	99	63.291	Cricetulus_griseus_crigri
ENSCSAVG00000001356	-	100	58.091	ENSCSEG00000010565	rab23	100	57.438	Cynoglossus_semilaevis
ENSCSAVG00000001356	-	100	64.050	ENSCVAG00000020501	rab23	100	63.485	Cyprinodon_variegatus
ENSCSAVG00000001356	-	100	65.145	ENSDARG00000004151	rab23	100	64.315	Danio_rerio
ENSCSAVG00000001356	-	99	63.025	ENSDNOG00000015501	RAB23	99	61.983	Dasypus_novemcinctus
ENSCSAVG00000001356	-	100	63.636	ENSDORG00000028344	Rab23	100	62.241	Dipodomys_ordii
ENSCSAVG00000001356	-	99	56.048	FBgn0037364	Rab23	88	55.242	Drosophila_melanogaster
ENSCSAVG00000001356	-	95	61.111	ENSEBUG00000010861	-	90	61.111	Eptatretus_burgeri
ENSCSAVG00000001356	-	99	64.017	ENSEASG00005003529	RAB23	99	62.605	Equus_asinus_asinus
ENSCSAVG00000001356	-	99	64.854	ENSECAG00000013427	RAB23	99	63.445	Equus_caballus
ENSCSAVG00000001356	-	100	60.643	ENSEEUG00000015045	RAB23	100	60.996	Erinaceus_europaeus
ENSCSAVG00000001356	-	99	65.126	ENSELUG00000020788	rab23	99	64.706	Esox_lucius
ENSCSAVG00000001356	-	99	64.854	ENSFCAG00000044358	RAB23	99	63.445	Felis_catus
ENSCSAVG00000001356	-	99	63.866	ENSFALG00000001708	RAB23	99	63.445	Ficedula_albicollis
ENSCSAVG00000001356	-	99	63.180	ENSFDAG00000014834	RAB23	99	61.765	Fukomys_damarensis
ENSCSAVG00000001356	-	100	63.071	ENSFHEG00000023069	rab23	100	63.071	Fundulus_heteroclitus
ENSCSAVG00000001356	-	100	63.636	ENSGMOG00000005102	rab23	100	62.656	Gadus_morhua
ENSCSAVG00000001356	-	99	62.343	ENSGALG00000016279	RAB23	99	62.185	Gallus_gallus
ENSCSAVG00000001356	-	100	63.636	ENSGAFG00000007684	rab23	100	63.071	Gambusia_affinis
ENSCSAVG00000001356	-	100	62.810	ENSGACG00000006151	rab23	100	62.241	Gasterosteus_aculeatus
ENSCSAVG00000001356	-	99	63.025	ENSGAGG00000012709	RAB23	99	62.605	Gopherus_agassizii
ENSCSAVG00000001356	-	100	59.917	ENSHBUG00000007966	rab23	100	59.751	Haplochromis_burtoni
ENSCSAVG00000001356	-	99	52.697	ENSHGLG00000009371	-	99	52.282	Heterocephalus_glaber_female
ENSCSAVG00000001356	-	99	63.445	ENSHGLG00000013030	-	99	62.605	Heterocephalus_glaber_female
ENSCSAVG00000001356	-	99	52.697	ENSHGLG00100017177	-	99	52.282	Heterocephalus_glaber_male
ENSCSAVG00000001356	-	99	63.445	ENSHGLG00100005945	-	99	62.605	Heterocephalus_glaber_male
ENSCSAVG00000001356	-	67	78.261	ENSHCOG00000013919	rab23	78	78.261	Hippocampus_comes
ENSCSAVG00000001356	-	100	58.921	ENSIPUG00000016494	rab23	78	78.261	Ictalurus_punctatus
ENSCSAVG00000001356	-	99	66.527	ENSSTOG00000010962	RAB23	99	65.126	Ictidomys_tridecemlineatus
ENSCSAVG00000001356	-	99	64.854	ENSJJAG00000020094	Rab23	99	63.445	Jaculus_jaculus
ENSCSAVG00000001356	-	100	63.071	ENSKMAG00000018270	rab23	100	63.071	Kryptolebias_marmoratus
ENSCSAVG00000001356	-	99	64.435	ENSLBEG00000013176	rab23	99	63.750	Labrus_bergylta
ENSCSAVG00000001356	-	100	64.463	ENSLACG00000004025	RAB23	100	63.071	Latimeria_chalumnae
ENSCSAVG00000001356	-	100	64.198	ENSLOCG00000016999	rab23	100	63.786	Lepisosteus_oculatus
ENSCSAVG00000001356	-	99	65.272	ENSLAFG00000007209	RAB23	99	63.866	Loxodonta_africana
ENSCSAVG00000001356	-	99	65.690	ENSMFAG00000032369	RAB23	99	64.286	Macaca_fascicularis
ENSCSAVG00000001356	-	99	65.690	ENSMMUG00000018003	RAB23	99	64.286	Macaca_mulatta
ENSCSAVG00000001356	-	99	65.690	ENSMNEG00000037012	RAB23	99	64.286	Macaca_nemestrina
ENSCSAVG00000001356	-	99	65.690	ENSMLEG00000042429	RAB23	99	64.286	Mandrillus_leucophaeus
ENSCSAVG00000001356	-	100	62.656	ENSMAMG00000015456	rab23	100	63.485	Mastacembelus_armatus
ENSCSAVG00000001356	-	100	64.050	ENSMZEG00005005441	rab23	100	63.900	Maylandia_zebra
ENSCSAVG00000001356	-	99	63.598	ENSMGAG00000013882	RAB23	99	63.025	Meleagris_gallopavo
ENSCSAVG00000001356	-	99	65.272	ENSMICG00000014037	RAB23	99	63.866	Microcebus_murinus
ENSCSAVG00000001356	-	99	65.272	ENSMOCG00000000444	Rab23	99	64.286	Microtus_ochrogaster
ENSCSAVG00000001356	-	100	58.678	ENSMMOG00000007703	rab23	100	58.921	Mola_mola
ENSCSAVG00000001356	-	99	64.435	ENSMODG00000018720	RAB23	99	63.025	Monodelphis_domestica
ENSCSAVG00000001356	-	100	61.983	ENSMALG00000002136	rab23	100	61.826	Monopterus_albus
ENSCSAVG00000001356	-	99	65.272	MGP_CAROLIEiJ_G0014015	Rab23	99	64.706	Mus_caroli
ENSCSAVG00000001356	-	99	64.854	ENSMUSG00000004768	Rab23	99	64.286	Mus_musculus
ENSCSAVG00000001356	-	99	65.690	MGP_PahariEiJ_G0027261	Rab23	99	65.126	Mus_pahari
ENSCSAVG00000001356	-	99	64.854	MGP_SPRETEiJ_G0014820	Rab23	99	64.286	Mus_spretus
ENSCSAVG00000001356	-	99	61.506	ENSMPUG00000002642	RAB23	99	61.506	Mustela_putorius_furo
ENSCSAVG00000001356	-	99	64.854	ENSMLUG00000004058	RAB23	99	63.445	Myotis_lucifugus
ENSCSAVG00000001356	-	99	64.435	ENSNGAG00000018038	Rab23	99	63.025	Nannospalax_galili
ENSCSAVG00000001356	-	100	64.050	ENSNBRG00000013691	rab23	100	63.900	Neolamprologus_brichardi
ENSCSAVG00000001356	-	99	66.109	ENSNLEG00000027830	RAB23	99	64.706	Nomascus_leucogenys
ENSCSAVG00000001356	-	99	63.445	ENSODEG00000016056	RAB23	99	63.025	Octodon_degus
ENSCSAVG00000001356	-	100	63.223	ENSONIG00000009749	rab23	100	63.071	Oreochromis_niloticus
ENSCSAVG00000001356	-	99	64.730	ENSOANG00000001398	RAB23	99	62.917	Ornithorhynchus_anatinus
ENSCSAVG00000001356	-	99	65.690	ENSOCUG00000004816	RAB23	99	64.286	Oryctolagus_cuniculus
ENSCSAVG00000001356	-	100	62.397	ENSORLG00000010115	rab23	100	61.826	Oryzias_latipes
ENSCSAVG00000001356	-	100	62.397	ENSORLG00020020220	rab23	100	61.826	Oryzias_latipes_hni
ENSCSAVG00000001356	-	100	62.397	ENSORLG00015004033	rab23	100	61.826	Oryzias_latipes_hsok
ENSCSAVG00000001356	-	100	63.223	ENSOMEG00000001706	rab23	100	62.656	Oryzias_melastigma
ENSCSAVG00000001356	-	99	65.690	ENSOGAG00000005675	RAB23	99	63.866	Otolemur_garnettii
ENSCSAVG00000001356	-	99	64.435	ENSOARG00000005749	RAB23	99	63.445	Ovis_aries
ENSCSAVG00000001356	-	99	66.109	ENSPPAG00000010023	RAB23	99	64.706	Pan_paniscus
ENSCSAVG00000001356	-	99	64.435	ENSPPRG00000012453	RAB23	99	63.025	Panthera_pardus
ENSCSAVG00000001356	-	99	64.854	ENSPTIG00000009435	RAB23	99	63.445	Panthera_tigris_altaica
ENSCSAVG00000001356	-	99	66.109	ENSPTRG00000043341	RAB23	99	64.706	Pan_troglodytes
ENSCSAVG00000001356	-	99	65.690	ENSPANG00000017772	RAB23	99	64.286	Papio_anubis
ENSCSAVG00000001356	-	78	71.958	ENSPKIG00000024310	rab23	93	71.958	Paramormyrops_kingsleyae
ENSCSAVG00000001356	-	99	64.854	ENSPSIG00000015579	RAB23	99	63.025	Pelodiscus_sinensis
ENSCSAVG00000001356	-	100	61.411	ENSPMGG00000008577	rab23	100	61.411	Periophthalmus_magnuspinnatus
ENSCSAVG00000001356	-	99	65.690	ENSPEMG00000023271	Rab23	99	64.706	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001356	-	99	56.379	ENSPMAG00000006835	-	99	56.379	Petromyzon_marinus
ENSCSAVG00000001356	-	99	64.017	ENSPCIG00000007267	RAB23	99	62.605	Phascolarctos_cinereus
ENSCSAVG00000001356	-	100	63.223	ENSPFOG00000011493	rab23	100	63.071	Poecilia_formosa
ENSCSAVG00000001356	-	100	62.810	ENSPLAG00000011697	rab23	100	62.656	Poecilia_latipinna
ENSCSAVG00000001356	-	100	63.223	ENSPMEG00000017300	rab23	100	62.656	Poecilia_mexicana
ENSCSAVG00000001356	-	100	59.091	ENSPREG00000022509	rab23	100	58.921	Poecilia_reticulata
ENSCSAVG00000001356	-	99	66.109	ENSPPYG00000016739	RAB23	99	64.706	Pongo_abelii
ENSCSAVG00000001356	-	99	64.854	ENSPCOG00000028471	RAB23	99	63.445	Propithecus_coquereli
ENSCSAVG00000001356	-	99	60.669	ENSPVAG00000017693	RAB23	99	59.244	Pteropus_vampyrus
ENSCSAVG00000001356	-	100	64.050	ENSPNYG00000019639	rab23	100	63.900	Pundamilia_nyererei
ENSCSAVG00000001356	-	100	63.071	ENSPNAG00000024728	rab23	100	63.071	Pygocentrus_nattereri
ENSCSAVG00000001356	-	99	65.690	ENSRNOG00000012629	Rab23	99	65.126	Rattus_norvegicus
ENSCSAVG00000001356	-	99	63.115	ENSRBIG00000030547	RAB23	99	61.728	Rhinopithecus_bieti
ENSCSAVG00000001356	-	99	65.690	ENSRROG00000035920	RAB23	99	64.286	Rhinopithecus_roxellana
ENSCSAVG00000001356	-	99	63.866	ENSSBOG00000033237	RAB23	99	63.445	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001356	-	99	63.598	ENSSHAG00000006379	RAB23	99	62.185	Sarcophilus_harrisii
ENSCSAVG00000001356	-	100	64.050	ENSSFOG00015012604	rab23	100	63.900	Scleropages_formosus
ENSCSAVG00000001356	-	99	63.180	ENSSMAG00000006341	rab23	99	62.500	Scophthalmus_maximus
ENSCSAVG00000001356	-	100	62.397	ENSSDUG00000023508	rab23	100	62.241	Seriola_dumerili
ENSCSAVG00000001356	-	100	62.397	ENSSLDG00000000287	rab23	100	62.241	Seriola_lalandi_dorsalis
ENSCSAVG00000001356	-	99	64.017	ENSSARG00000013689	RAB23	99	62.605	Sorex_araneus
ENSCSAVG00000001356	-	99	64.854	ENSSPUG00000006274	RAB23	99	63.025	Sphenodon_punctatus
ENSCSAVG00000001356	-	100	62.656	ENSSPAG00000010373	rab23	100	62.656	Stegastes_partitus
ENSCSAVG00000001356	-	99	61.765	ENSSSCG00000029539	RAB23	99	62.185	Sus_scrofa
ENSCSAVG00000001356	-	99	63.866	ENSTGUG00000012794	RAB23	99	63.445	Taeniopygia_guttata
ENSCSAVG00000001356	-	100	63.223	ENSTRUG00000015697	rab23	100	62.397	Takifugu_rubripes
ENSCSAVG00000001356	-	100	64.609	ENSTNIG00000016575	rab23	100	64.463	Tetraodon_nigroviridis
ENSCSAVG00000001356	-	99	64.435	ENSUAMG00000013367	RAB23	99	63.445	Ursus_americanus
ENSCSAVG00000001356	-	99	64.435	ENSUMAG00000018629	RAB23	99	63.445	Ursus_maritimus
ENSCSAVG00000001356	-	51	82.500	ENSVPAG00000006805	RAB23	64	82.500	Vicugna_pacos
ENSCSAVG00000001356	-	99	63.598	ENSVVUG00000008535	RAB23	99	62.605	Vulpes_vulpes
ENSCSAVG00000001356	-	99	61.088	ENSXETG00000004449	rab23	99	58.750	Xenopus_tropicalis
ENSCSAVG00000001356	-	100	63.223	ENSXCOG00000011864	rab23	100	63.071	Xiphophorus_couchianus
ENSCSAVG00000001356	-	100	63.636	ENSXMAG00000009387	rab23	100	63.485	Xiphophorus_maculatus