EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001363 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5947 bases
Position: chrreftig_30:265436-271382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002328	RRM_1	PF00076.22	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002366	-	1133	-	ENSCSAVP00000002328	305 (aa)	-	H2YAI0

Gene Model

Click here to download ENSCSAVG00000001363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001363	-	61	37.634	ENSG00000155438	NIFK	78	41.667	Homo_sapiens
ENSCSAVG00000001363	-	80	43.673	ENSAPOG00000005547	nifk	83	42.449	Acanthochromis_polyacanthus
ENSCSAVG00000001363	-	61	34.574	ENSAMEG00000005074	NIFK	97	30.612	Ailuropoda_melanoleuca
ENSCSAVG00000001363	-	68	42.723	ENSACIG00000018626	nifk	76	41.700	Amphilophus_citrinellus
ENSCSAVG00000001363	-	84	43.191	ENSAOCG00000012662	nifk	87	42.023	Amphiprion_ocellaris
ENSCSAVG00000001363	-	84	43.191	ENSAPEG00000002123	nifk	87	42.023	Amphiprion_percula
ENSCSAVG00000001363	-	80	40.164	ENSATEG00000006206	nifk	86	39.344	Anabas_testudineus
ENSCSAVG00000001363	-	87	37.313	ENSACAG00000004655	NIFK	91	37.687	Anolis_carolinensis
ENSCSAVG00000001363	-	61	36.559	ENSANAG00000032684	-	69	36.559	Aotus_nancymaae
ENSCSAVG00000001363	-	89	33.677	ENSANAG00000029859	-	96	33.333	Aotus_nancymaae
ENSCSAVG00000001363	-	62	45.263	ENSAMXG00000029665	nifk	87	40.476	Astyanax_mexicanus
ENSCSAVG00000001363	-	61	35.638	ENSBTAG00000019387	NIFK	97	30.847	Bos_taurus
ENSCSAVG00000001363	-	61	37.634	ENSCJAG00000013386	NIFK	98	31.271	Callithrix_jacchus
ENSCSAVG00000001363	-	89	31.438	ENSCAFG00000004710	NIFK	98	30.435	Canis_familiaris
ENSCSAVG00000001363	-	89	31.502	ENSCAFG00020011751	NIFK	98	31.250	Canis_lupus_dingo
ENSCSAVG00000001363	-	61	36.702	ENSCHIG00000010512	NIFK	62	36.702	Capra_hircus
ENSCSAVG00000001363	-	87	32.394	ENSTSYG00000001411	NIFK	98	33.447	Carlito_syrichta
ENSCSAVG00000001363	-	61	36.559	ENSCPOG00000007472	NIFK	84	33.594	Cavia_porcellus
ENSCSAVG00000001363	-	76	35.039	ENSCCAG00000025869	NIFK	96	34.783	Cebus_capucinus
ENSCSAVG00000001363	-	61	37.097	ENSCATG00000015239	NIFK	84	35.685	Cercocebus_atys
ENSCSAVG00000001363	-	61	36.022	ENSCLAG00000006296	NIFK	60	36.022	Chinchilla_lanigera
ENSCSAVG00000001363	-	86	31.741	ENSCSAG00000017231	-	85	33.858	Chlorocebus_sabaeus
ENSCSAVG00000001363	-	89	31.879	ENSCSAG00000016704	NIFK	84	34.921	Chlorocebus_sabaeus
ENSCSAVG00000001363	-	68	40.175	ENSCHOG00000002227	NIFK	56	49.324	Choloepus_hoffmanni
ENSCSAVG00000001363	-	81	36.078	ENSCPBG00000013739	NIFK	77	37.674	Chrysemys_picta_bellii
ENSCSAVG00000001363	-	89	32.423	ENSCANG00000036234	NIFK	98	31.959	Colobus_angolensis_palliatus
ENSCSAVG00000001363	-	79	41.250	ENSCSEG00000015419	nifk	81	40.000	Cynoglossus_semilaevis
ENSCSAVG00000001363	-	62	42.632	ENSDARG00000040666	nifk	74	41.441	Danio_rerio
ENSCSAVG00000001363	-	89	36.120	ENSDNOG00000046092	-	97	36.120	Dasypus_novemcinctus
ENSCSAVG00000001363	-	89	37.201	ENSDNOG00000005017	-	98	36.242	Dasypus_novemcinctus
ENSCSAVG00000001363	-	61	36.022	ENSEASG00005004772	NIFK	75	36.022	Equus_asinus_asinus
ENSCSAVG00000001363	-	61	36.022	ENSECAG00000018478	NIFK	98	30.903	Equus_caballus
ENSCSAVG00000001363	-	61	37.097	ENSEEUG00000008535	-	62	44.218	Erinaceus_europaeus
ENSCSAVG00000001363	-	55	35.673	ENSFCAG00000010787	NIFK	86	33.074	Felis_catus
ENSCSAVG00000001363	-	81	31.939	ENSFDAG00000021146	NIFK	89	31.559	Fukomys_damarensis
ENSCSAVG00000001363	-	58	45.251	ENSFHEG00000020455	nifk	50	49.650	Fundulus_heteroclitus
ENSCSAVG00000001363	-	64	40.206	ENSGMOG00000003166	nifk	66	40.206	Gadus_morhua
ENSCSAVG00000001363	-	58	42.697	ENSGALG00000011650	NIFK	84	36.187	Gallus_gallus
ENSCSAVG00000001363	-	68	40.654	ENSGAFG00000011462	nifk	71	39.437	Gambusia_affinis
ENSCSAVG00000001363	-	82	37.008	ENSGACG00000001551	nifk	70	41.919	Gasterosteus_aculeatus
ENSCSAVG00000001363	-	76	33.466	ENSGGOG00000025617	-	82	33.068	Gorilla_gorilla
ENSCSAVG00000001363	-	61	37.634	ENSGGOG00000023498	NIFK	85	36.364	Gorilla_gorilla
ENSCSAVG00000001363	-	91	31.164	ENSHGLG00000008673	NIFK	98	30.405	Heterocephalus_glaber_female
ENSCSAVG00000001363	-	91	30.822	ENSHGLG00100003651	NIFK	98	30.068	Heterocephalus_glaber_male
ENSCSAVG00000001363	-	80	39.130	ENSHCOG00000007721	nifk	81	39.921	Hippocampus_comes
ENSCSAVG00000001363	-	69	41.509	ENSIPUG00000023690	nifk	71	41.256	Ictalurus_punctatus
ENSCSAVG00000001363	-	60	36.957	ENSJJAG00000008547	Nifk	84	33.333	Jaculus_jaculus
ENSCSAVG00000001363	-	62	46.842	ENSKMAG00000005871	nifk	67	46.842	Kryptolebias_marmoratus
ENSCSAVG00000001363	-	65	44.670	ENSLBEG00000003213	nifk	82	40.000	Labrus_bergylta
ENSCSAVG00000001363	-	65	44.670	ENSLBEG00000027125	nifk	82	40.000	Labrus_bergylta
ENSCSAVG00000001363	-	79	40.486	ENSLOCG00000002155	nifk	90	39.669	Lepisosteus_oculatus
ENSCSAVG00000001363	-	86	37.037	ENSLAFG00000030731	NIFK	83	40.086	Loxodonta_africana
ENSCSAVG00000001363	-	89	32.993	ENSMFAG00000031270	NIFK	84	36.364	Macaca_fascicularis
ENSCSAVG00000001363	-	89	32.993	ENSMMUG00000020928	NIFK	84	34.921	Macaca_mulatta
ENSCSAVG00000001363	-	89	32.993	ENSMNEG00000035940	NIFK	84	35.714	Macaca_nemestrina
ENSCSAVG00000001363	-	80	42.629	ENSMAMG00000008963	nifk	84	42.213	Mastacembelus_armatus
ENSCSAVG00000001363	-	87	31.379	ENSMAUG00000021255	Nifk	84	33.594	Mesocricetus_auratus
ENSCSAVG00000001363	-	59	37.158	ENSMICG00000037600	NIFK	84	34.413	Microcebus_murinus
ENSCSAVG00000001363	-	89	34.173	ENSMOCG00000001962	Nifk	83	34.426	Microtus_ochrogaster
ENSCSAVG00000001363	-	60	42.857	ENSMODG00000000152	-	82	37.643	Monodelphis_domestica
ENSCSAVG00000001363	-	60	48.352	ENSMALG00000008759	nifk	83	41.393	Monopterus_albus
ENSCSAVG00000001363	-	69	32.547	MGP_CAROLIEiJ_G0014507	Nifk	77	52.564	Mus_caroli
ENSCSAVG00000001363	-	60	34.783	MGP_PahariEiJ_G0027743	Nifk	82	52.439	Mus_pahari
ENSCSAVG00000001363	-	76	34.091	ENSMLUG00000006481	NIFK	84	34.375	Myotis_lucifugus
ENSCSAVG00000001363	-	63	34.694	ENSNGAG00000014831	Nifk	52	43.038	Nannospalax_galili
ENSCSAVG00000001363	-	61	37.634	ENSNLEG00000001163	NIFK	85	35.573	Nomascus_leucogenys
ENSCSAVG00000001363	-	75	32.540	ENSNLEG00000028987	-	81	32.479	Nomascus_leucogenys
ENSCSAVG00000001363	-	61	39.785	ENSODEG00000006240	-	86	34.733	Octodon_degus
ENSCSAVG00000001363	-	89	31.164	ENSOCUG00000007451	-	97	30.479	Oryctolagus_cuniculus
ENSCSAVG00000001363	-	59	46.927	ENSOMEG00000018272	nifk	78	41.262	Oryzias_melastigma
ENSCSAVG00000001363	-	77	38.589	ENSOGAG00000016968	NIFK	95	38.494	Otolemur_garnettii
ENSCSAVG00000001363	-	61	36.702	ENSOARG00000013327	NIFK	62	36.702	Ovis_aries
ENSCSAVG00000001363	-	67	33.645	ENSPPAG00000033086	-	52	38.889	Pan_paniscus
ENSCSAVG00000001363	-	75	34.043	ENSPPAG00000028694	-	84	33.476	Pan_paniscus
ENSCSAVG00000001363	-	61	37.097	ENSPPAG00000034981	NIFK	85	34.646	Pan_paniscus
ENSCSAVG00000001363	-	67	33.645	ENSPTRG00000043623	-	52	38.889	Pan_troglodytes
ENSCSAVG00000001363	-	80	34.783	ENSPTRG00000012419	NIFK	83	37.603	Pan_troglodytes
ENSCSAVG00000001363	-	89	32.993	ENSPANG00000009239	NIFK	84	36.111	Papio_anubis
ENSCSAVG00000001363	-	63	44.560	ENSPKIG00000020011	nifk	91	37.818	Paramormyrops_kingsleyae
ENSCSAVG00000001363	-	83	41.176	ENSPMGG00000016653	nifk	92	41.569	Periophthalmus_magnuspinnatus
ENSCSAVG00000001363	-	88	32.573	ENSPEMG00000023356	Nifk	59	36.022	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001363	-	58	48.588	ENSPMAG00000007316	nifk	90	48.588	Petromyzon_marinus
ENSCSAVG00000001363	-	68	41.509	ENSPFOG00000000517	nifk	72	40.865	Poecilia_formosa
ENSCSAVG00000001363	-	68	41.232	ENSPLAG00000015839	nifk	72	40.865	Poecilia_latipinna
ENSCSAVG00000001363	-	68	40.758	ENSPMEG00000008828	nifk	72	40.865	Poecilia_mexicana
ENSCSAVG00000001363	-	68	41.905	ENSPREG00000008485	nifk	72	41.546	Poecilia_reticulata
ENSCSAVG00000001363	-	89	31.879	ENSPPYG00000018557	-	85	35.039	Pongo_abelii
ENSCSAVG00000001363	-	76	35.000	ENSPPYG00000025875	-	96	35.433	Pongo_abelii
ENSCSAVG00000001363	-	64	32.821	ENSPCOG00000023378	NIFK	90	32.821	Propithecus_coquereli
ENSCSAVG00000001363	-	80	32.000	ENSPVAG00000016707	NIFK	77	36.522	Pteropus_vampyrus
ENSCSAVG00000001363	-	84	39.535	ENSPNAG00000017902	nifk	92	38.996	Pygocentrus_nattereri
ENSCSAVG00000001363	-	78	31.429	ENSRNOG00000025701	Nifk	90	38.889	Rattus_norvegicus
ENSCSAVG00000001363	-	89	32.215	ENSRBIG00000035094	NIFK	98	32.302	Rhinopithecus_bieti
ENSCSAVG00000001363	-	89	32.215	ENSRROG00000039485	NIFK	98	32.302	Rhinopithecus_roxellana
ENSCSAVG00000001363	-	80	33.579	ENSSBOG00000033603	NIFK	96	34.021	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001363	-	79	37.879	ENSSHAG00000011786	NIFK	87	35.816	Sarcophilus_harrisii
ENSCSAVG00000001363	-	60	45.902	ENSSMAG00000001845	nifk	84	39.837	Scophthalmus_maximus
ENSCSAVG00000001363	-	80	39.754	ENSSDUG00000005813	nifk	83	39.344	Seriola_dumerili
ENSCSAVG00000001363	-	80	39.442	ENSSLDG00000003456	nifk	83	39.344	Seriola_lalandi_dorsalis
ENSCSAVG00000001363	-	68	42.523	ENSSPAG00000023399	nifk	92	36.797	Stegastes_partitus
ENSCSAVG00000001363	-	62	34.896	ENSSSCG00000015730	NIFK	84	33.465	Sus_scrofa
ENSCSAVG00000001363	-	80	40.964	ENSTRUG00000005206	nifk	82	40.244	Takifugu_rubripes
ENSCSAVG00000001363	-	62	46.632	ENSTNIG00000017831	nifk	77	46.632	Tetraodon_nigroviridis
ENSCSAVG00000001363	-	81	31.321	ENSTBEG00000001123	NIFK	84	33.600	Tupaia_belangeri
ENSCSAVG00000001363	-	56	36.628	ENSTTRG00000005849	NIFK	90	34.363	Tursiops_truncatus
ENSCSAVG00000001363	-	74	34.934	ENSUMAG00000008522	NIFK	99	34.934	Ursus_maritimus
ENSCSAVG00000001363	-	61	36.702	ENSVPAG00000005847	NIFK	79	36.702	Vicugna_pacos
ENSCSAVG00000001363	-	83	34.510	ENSVVUG00000027544	NIFK	93	33.465	Vulpes_vulpes
ENSCSAVG00000001363	-	51	49.045	ENSXETG00000000839	nifk	58	51.724	Xenopus_tropicalis
ENSCSAVG00000001363	-	68	41.509	ENSXMAG00000023401	nifk	71	40.865	Xiphophorus_maculatus