EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000001385 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
9238 bases
Position
chrreftig_5:1743548-1752785
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000002358RRM_1PF00076.229.2e-3712
ENSCSAVP00000002358RRM_1PF00076.229.2e-3722
ENSCSAVP00000002356RRM_1PF00076.229.2e-3712
ENSCSAVP00000002356RRM_1PF00076.229.2e-3722
ENSCSAVP00000002357RRM_1PF00076.221.1e-3612
ENSCSAVP00000002357RRM_1PF00076.221.1e-3622
ENSCSAVP00000002355RRM_1PF00076.221.7e-2111
ENSCSAVP00000002359RRM_1PF00076.229.7e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000002393-1802-ENSCSAVP00000002355330 (aa)-H2YAK7
ENSCSAVT00000002396-1643-ENSCSAVP00000002358513 (aa)-H2YAL0
ENSCSAVT00000002397-1620-ENSCSAVP00000002359535 (aa)-H2YAL1
ENSCSAVT00000002394-1809-ENSCSAVP00000002356519 (aa)-H2YAK8
ENSCSAVT00000002395-1754-ENSCSAVP00000002357534 (aa)-H2YAK9
Gene Model
Click here to download ENSCSAVG00000001385's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001385's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000001385-10045.994ENSCSAVG00000004765-9746.050
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000001385-9955.000ENSG00000179950PUF609755.364Homo_sapiens
ENSCSAVG00000001385-9953.817ENSAPOG00000001713puf60b9553.817Acanthochromis_polyacanthus
ENSCSAVG00000001385-9953.372ENSAMEG00000006406PUF609053.640Ailuropoda_melanoleuca
ENSCSAVG00000001385-9952.113ENSACIG00000003263-9750.575Amphilophus_citrinellus
ENSCSAVG00000001385-9953.743ENSACIG00000021705puf60b9754.095Amphilophus_citrinellus
ENSCSAVG00000001385-9953.817ENSAOCG00000005395puf60b9753.817Amphiprion_ocellaris
ENSCSAVG00000001385-9953.061ENSAOCG00000015558-9553.757Amphiprion_ocellaris
ENSCSAVG00000001385-9950.000ENSAPEG00000001836-9850.191Amphiprion_percula
ENSCSAVG00000001385-9951.434ENSAPEG00000011923puf60b9551.434Amphiprion_percula
ENSCSAVG00000001385-9953.672ENSATEG00000001730puf60b9553.497Anabas_testudineus
ENSCSAVG00000001385-9953.216ENSATEG00000006303-8266.667Anabas_testudineus
ENSCSAVG00000001385-9955.192ENSAPLG00000010150PUF609655.364Anas_platyrhynchos
ENSCSAVG00000001385-9954.876ENSACAG00000001645PUF609454.943Anolis_carolinensis
ENSCSAVG00000001385-9955.000ENSANAG00000018626PUF609755.364Aotus_nancymaae
ENSCSAVG00000001385-9953.743ENSACLG00000004462puf60b9754.095Astatotilapia_calliptera
ENSCSAVG00000001385-9954.511ENSAMXG00000036570puf60a9853.172Astyanax_mexicanus
ENSCSAVG00000001385-8765.306ENSAMXG00000041030puf60b9751.145Astyanax_mexicanus
ENSCSAVG00000001385-9955.192ENSBTAG00000037493PUF609655.556Bos_taurus
ENSCSAVG00000001385-8643.382WBGene00004389rnp-68141.967Caenorhabditis_elegans
ENSCSAVG00000001385-9955.000ENSCJAG00000021485PUF609555.364Callithrix_jacchus
ENSCSAVG00000001385-9955.192ENSCAFG00000001400PUF609055.556Canis_familiaris
ENSCSAVG00000001385-9955.192ENSCAFG00020018754PUF609555.556Canis_lupus_dingo
ENSCSAVG00000001385-9955.192ENSCHIG00000001618PUF608455.556Capra_hircus
ENSCSAVG00000001385-9955.192ENSTSYG00000011912PUF609854.857Carlito_syrichta
ENSCSAVG00000001385-9950.954ENSCPOG00000014613PUF609151.331Cavia_porcellus
ENSCSAVG00000001385-9955.000ENSCCAG00000007744PUF609555.364Cebus_capucinus
ENSCSAVG00000001385-9955.000ENSCATG00000035405PUF609555.364Cercocebus_atys
ENSCSAVG00000001385-9955.192ENSCLAG00000009154PUF608955.556Chinchilla_lanigera
ENSCSAVG00000001385-9955.000ENSCSAG00000008878PUF609755.364Chlorocebus_sabaeus
ENSCSAVG00000001385-10054.701ENSCPBG00000005595PUF609555.449Chrysemys_picta_bellii
ENSCSAVG00000001385-10049.412ENSCING00000008436-9548.356Ciona_intestinalis
ENSCSAVG00000001385-6668.129ENSCING00000002156-8967.365Ciona_intestinalis
ENSCSAVG00000001385-8152.844ENSCANG00000041843PUF609753.302Colobus_angolensis_palliatus
ENSCSAVG00000001385-9955.192ENSCGRG00001017442Puf608955.364Cricetulus_griseus_chok1gshd
ENSCSAVG00000001385-9955.192ENSCGRG00000003717Puf608955.364Cricetulus_griseus_crigri
ENSCSAVG00000001385-9951.014ENSCSEG00000014845-8751.931Cynoglossus_semilaevis
ENSCSAVG00000001385-9954.728ENSCSEG00000019887puf60b8954.476Cynoglossus_semilaevis
ENSCSAVG00000001385-9953.448ENSCVAG00000001560-9254.425Cyprinodon_variegatus
ENSCSAVG00000001385-9953.757ENSCVAG00000009386puf60b9753.905Cyprinodon_variegatus
ENSCSAVG00000001385-9953.333ENSDARG00000001241puf60b9460.232Danio_rerio
ENSCSAVG00000001385-9955.319ENSDARG00000032175puf60a9459.292Danio_rerio
ENSCSAVG00000001385-9553.412ENSDNOG00000043278PUF607764.384Dasypus_novemcinctus
ENSCSAVG00000001385-9955.192ENSDORG00000004585Puf609155.556Dipodomys_ordii
ENSCSAVG00000001385-9253.030FBgn0028577hfp10042.755Drosophila_melanogaster
ENSCSAVG00000001385-9948.082ENSEBUG00000014291puf60b8148.174Eptatretus_burgeri
ENSCSAVG00000001385-10052.023ENSEBUG00000005470-8851.445Eptatretus_burgeri
ENSCSAVG00000001385-9955.192ENSEASG00005009695PUF609555.556Equus_asinus_asinus
ENSCSAVG00000001385-9955.192ENSECAG00000024681PUF609455.556Equus_caballus
ENSCSAVG00000001385-9954.857ENSELUG00000018443-9754.580Esox_lucius
ENSCSAVG00000001385-9953.817ENSELUG00000006507puf60b9752.834Esox_lucius
ENSCSAVG00000001385-9955.192ENSFCAG00000001045PUF609854.857Felis_catus
ENSCSAVG00000001385-9652.881ENSFALG00000001136PUF609549.617Ficedula_albicollis
ENSCSAVG00000001385-9955.385ENSFDAG00000017177PUF608955.747Fukomys_damarensis
ENSCSAVG00000001385-9952.857ENSFHEG00000021687PUF608766.154Fundulus_heteroclitus
ENSCSAVG00000001385-9954.143ENSFHEG00000020046puf60b9754.286Fundulus_heteroclitus
ENSCSAVG00000001385-9951.507ENSGMOG00000006392puf60b8468.889Gadus_morhua
ENSCSAVG00000001385-6657.971ENSGALG00000039901PUF609157.971Gallus_gallus
ENSCSAVG00000001385-9952.663ENSGAFG00000004334-9951.690Gambusia_affinis
ENSCSAVG00000001385-9954.143ENSGAFG00000021040puf60b9754.286Gambusia_affinis
ENSCSAVG00000001385-8568.889ENSGACG00000004717puf60b9548.197Gasterosteus_aculeatus
ENSCSAVG00000001385-9949.515ENSGACG00000001484-9748.069Gasterosteus_aculeatus
ENSCSAVG00000001385-10054.701ENSGAGG00000013289PUF608955.556Gopherus_agassizii
ENSCSAVG00000001385-9955.000ENSGGOG00000004646PUF609555.364Gorilla_gorilla
ENSCSAVG00000001385-9953.743ENSHBUG00000015118puf60b9754.095Haplochromis_burtoni
ENSCSAVG00000001385-9953.307ENSHBUG00000009634-9752.783Haplochromis_burtoni
ENSCSAVG00000001385-9955.385ENSHGLG00000006111PUF608955.747Heterocephalus_glaber_female
ENSCSAVG00000001385-9955.385ENSHGLG00100012362PUF608955.747Heterocephalus_glaber_male
ENSCSAVG00000001385-9947.481ENSHCOG00000000378-7963.265Hippocampus_comes
ENSCSAVG00000001385-9951.756ENSHCOG00000015541puf60b9752.230Hippocampus_comes
ENSCSAVG00000001385-9954.054ENSIPUG00000002453puf60a9754.335Ictalurus_punctatus
ENSCSAVG00000001385-9951.316ENSIPUG00000004660puf60b9752.273Ictalurus_punctatus
ENSCSAVG00000001385-9955.192ENSSTOG00000025037PUF609055.556Ictidomys_tridecemlineatus
ENSCSAVG00000001385-9955.192ENSJJAG00000001076Puf609055.556Jaculus_jaculus
ENSCSAVG00000001385-9953.565ENSKMAG00000010106-9653.462Kryptolebias_marmoratus
ENSCSAVG00000001385-9953.551ENSKMAG00000016745puf60b9754.095Kryptolebias_marmoratus
ENSCSAVG00000001385-9966.667ENSLBEG00000012505puf60b9866.667Labrus_bergylta
ENSCSAVG00000001385-7547.970ENSLACG00000005456PUF609951.330Latimeria_chalumnae
ENSCSAVG00000001385-9955.939ENSLOCG00000010106puf60b9555.939Lepisosteus_oculatus
ENSCSAVG00000001385-9954.423ENSLAFG00000022929PUF609054.789Loxodonta_africana
ENSCSAVG00000001385-9955.000ENSMFAG00000043373PUF609555.364Macaca_fascicularis
ENSCSAVG00000001385-9955.000ENSMMUG00000013558PUF609555.364Macaca_mulatta
ENSCSAVG00000001385-9955.000ENSMNEG00000031099PUF609555.364Macaca_nemestrina
ENSCSAVG00000001385-9955.000ENSMLEG00000040009PUF609755.364Mandrillus_leucophaeus
ENSCSAVG00000001385-9953.920ENSMAMG00000019476-9553.920Mastacembelus_armatus
ENSCSAVG00000001385-9954.728ENSMAMG00000010394puf60b9853.645Mastacembelus_armatus
ENSCSAVG00000001385-9953.743ENSMZEG00005018515puf60b9754.095Maylandia_zebra
ENSCSAVG00000001385-9953.198ENSMZEG00005019425-9553.257Maylandia_zebra
ENSCSAVG00000001385-9955.192ENSMGAG00000013070PUF609457.022Meleagris_gallopavo
ENSCSAVG00000001385-6956.546ENSMAUG00000014267-8556.546Mesocricetus_auratus
ENSCSAVG00000001385-9848.688ENSMAUG00000018549-8260.317Mesocricetus_auratus
ENSCSAVG00000001385-9955.192ENSMICG00000012226PUF609655.556Microcebus_murinus
ENSCSAVG00000001385-9955.192ENSMOCG00000018780Puf609055.556Microtus_ochrogaster
ENSCSAVG00000001385-9953.274ENSMMOG00000018059-9952.154Mola_mola
ENSCSAVG00000001385-9954.667ENSMMOG00000004217puf60b9754.667Mola_mola
ENSCSAVG00000001385-9954.808ENSMODG00000009161PUF609155.172Monodelphis_domestica
ENSCSAVG00000001385-9949.237ENSMALG00000006797puf60b9548.855Monopterus_albus
ENSCSAVG00000001385-9952.863ENSMALG00000000200-9552.290Monopterus_albus
ENSCSAVG00000001385-9955.385MGP_CAROLIEiJ_G0019910Puf608955.747Mus_caroli
ENSCSAVG00000001385-9955.385ENSMUSG00000002524Puf608955.747Mus_musculus
ENSCSAVG00000001385-9955.385MGP_PahariEiJ_G0019920Puf608955.747Mus_pahari
ENSCSAVG00000001385-9955.385MGP_SPRETEiJ_G0020812Puf608955.747Mus_spretus
ENSCSAVG00000001385-9955.385ENSMPUG00000008137PUF608955.747Mustela_putorius_furo
ENSCSAVG00000001385-10053.276ENSMLUG00000013032-9553.448Myotis_lucifugus
ENSCSAVG00000001385-9954.615ENSMLUG00000000238-9054.981Myotis_lucifugus
ENSCSAVG00000001385-9955.192ENSNGAG00000000712Puf609755.556Nannospalax_galili
ENSCSAVG00000001385-8351.131ENSNBRG00000013047puf60b9650.228Neolamprologus_brichardi
ENSCSAVG00000001385-9954.070ENSNBRG00000017223-8266.667Neolamprologus_brichardi
ENSCSAVG00000001385-9955.000ENSNLEG00000002156PUF609555.364Nomascus_leucogenys
ENSCSAVG00000001385-7259.857ENSOPRG00000002147PUF606761.923Ochotona_princeps
ENSCSAVG00000001385-6558.529ENSODEG00000014024-7858.529Octodon_degus
ENSCSAVG00000001385-10043.491ENSODEG00000015513-9439.847Octodon_degus
ENSCSAVG00000001385-9953.743ENSONIG00000006247puf60b9554.095Oreochromis_niloticus
ENSCSAVG00000001385-9953.198ENSONIG00000014030-9553.065Oreochromis_niloticus
ENSCSAVG00000001385-9745.972ENSOANG00000006962PUF608159.009Ornithorhynchus_anatinus
ENSCSAVG00000001385-9954.155ENSORLG00000012279puf60b9754.286Oryzias_latipes
ENSCSAVG00000001385-9953.475ENSORLG00000028655-9753.668Oryzias_latipes
ENSCSAVG00000001385-9953.179ENSORLG00020018144-9553.372Oryzias_latipes_hni
ENSCSAVG00000001385-9954.155ENSORLG00020007333puf609754.286Oryzias_latipes_hni
ENSCSAVG00000001385-9953.372ENSORLG00015016833-9751.767Oryzias_latipes_hsok
ENSCSAVG00000001385-9953.950ENSORLG00015007718puf60b9753.950Oryzias_latipes_hsok
ENSCSAVG00000001385-9954.231ENSOMEG00000022185-9553.372Oryzias_melastigma
ENSCSAVG00000001385-9953.030ENSOMEG00000001643puf60b9952.157Oryzias_melastigma
ENSCSAVG00000001385-9955.192ENSOGAG00000006259PUF609055.556Otolemur_garnettii
ENSCSAVG00000001385-9954.054ENSOARG00000016235PUF609553.654Ovis_aries
ENSCSAVG00000001385-9955.000ENSPPAG00000029933PUF609555.364Pan_paniscus
ENSCSAVG00000001385-9955.192ENSPPRG00000003257PUF609854.857Panthera_pardus
ENSCSAVG00000001385-9954.913ENSPTIG00000009795PUF609654.580Panthera_tigris_altaica
ENSCSAVG00000001385-9955.000ENSPTRG00000020670PUF609555.364Pan_troglodytes
ENSCSAVG00000001385-9955.000ENSPTRG00000043963-9555.364Pan_troglodytes
ENSCSAVG00000001385-9955.000ENSPANG00000021936PUF609555.364Papio_anubis
ENSCSAVG00000001385-9955.028ENSPKIG00000004295puf60a9657.143Paramormyrops_kingsleyae
ENSCSAVG00000001385-9954.771ENSPKIG00000012204puf60b9754.962Paramormyrops_kingsleyae
ENSCSAVG00000001385-9955.192ENSPSIG00000004679PUF609555.556Pelodiscus_sinensis
ENSCSAVG00000001385-9952.174ENSPMGG00000013444puf60b9752.174Periophthalmus_magnuspinnatus
ENSCSAVG00000001385-9955.192ENSPEMG00000008820Puf608955.556Peromyscus_maniculatus_bairdii
ENSCSAVG00000001385-9955.192ENSPCIG00000020270PUF609655.556Phascolarctos_cinereus
ENSCSAVG00000001385-9953.101ENSPFOG00000011118-9552.713Poecilia_formosa
ENSCSAVG00000001385-9953.950ENSPFOG00000019217puf60b9553.817Poecilia_formosa
ENSCSAVG00000001385-9954.143ENSPLAG00000010754puf60b9754.286Poecilia_latipinna
ENSCSAVG00000001385-9953.269ENSPLAG00000017025-8752.885Poecilia_latipinna
ENSCSAVG00000001385-9954.143ENSPMEG00000000838puf60b9754.286Poecilia_mexicana
ENSCSAVG00000001385-9953.198ENSPMEG00000009767-7763.359Poecilia_mexicana
ENSCSAVG00000001385-9952.713ENSPREG00000005440puf60b9852.529Poecilia_reticulata
ENSCSAVG00000001385-8151.422ENSPPYG00000018951-9351.887Pongo_abelii
ENSCSAVG00000001385-8153.081ENSPCAG00000014837PUF609753.538Procavia_capensis
ENSCSAVG00000001385-9955.192ENSPCOG00000027981PUF609655.556Propithecus_coquereli
ENSCSAVG00000001385-9258.865ENSPVAG00000016167PUF607958.865Pteropus_vampyrus
ENSCSAVG00000001385-9953.743ENSPNYG00000002556puf60b9754.095Pundamilia_nyererei
ENSCSAVG00000001385-9953.198ENSPNYG00000004273-9553.257Pundamilia_nyererei
ENSCSAVG00000001385-9951.758ENSPNAG00000019415puf60b8751.731Pygocentrus_nattereri
ENSCSAVG00000001385-9953.955ENSPNAG00000019909puf60a9653.920Pygocentrus_nattereri
ENSCSAVG00000001385-9955.385ENSRNOG00000009960Puf608955.747Rattus_norvegicus
ENSCSAVG00000001385-9955.000ENSRBIG00000035274PUF609555.364Rhinopithecus_bieti
ENSCSAVG00000001385-9955.000ENSRROG00000029360PUF609555.364Rhinopithecus_roxellana
ENSCSAVG00000001385-9954.038ENSSBOG00000027089PUF609553.640Saimiri_boliviensis_boliviensis
ENSCSAVG00000001385-7074.648ENSSHAG00000006668PUF608655.889Sarcophilus_harrisii
ENSCSAVG00000001385-9954.286ENSSFOG00015019371puf60a9854.440Scleropages_formosus
ENSCSAVG00000001385-9954.896ENSSFOG00015019619puf60b9854.118Scleropages_formosus
ENSCSAVG00000001385-7365.306ENSSMAG00000016381puf60b6765.306Scophthalmus_maximus
ENSCSAVG00000001385-9953.875ENSSDUG00000009935puf60b9953.033Seriola_dumerili
ENSCSAVG00000001385-9754.491ENSSDUG00000007048-7970.000Seriola_dumerili
ENSCSAVG00000001385-9954.369ENSSLDG00000007366-9753.700Seriola_lalandi_dorsalis
ENSCSAVG00000001385-9954.286ENSSLDG00000024011puf60b9853.947Seriola_lalandi_dorsalis
ENSCSAVG00000001385-6753.026ENSSPUG00000013518PUF609153.026Sphenodon_punctatus
ENSCSAVG00000001385-9953.282ENSSPAG00000020285-9753.757Stegastes_partitus
ENSCSAVG00000001385-9953.571ENSSPAG00000012144puf60b9853.947Stegastes_partitus
ENSCSAVG00000001385-9955.192ENSSSCG00000038800PUF609952.917Sus_scrofa
ENSCSAVG00000001385-9954.753ENSTGUG00000012797-9654.839Taeniopygia_guttata
ENSCSAVG00000001385-9954.159ENSTRUG00000005420puf60b9853.672Takifugu_rubripes
ENSCSAVG00000001385-9953.593ENSTRUG00000008843-9752.124Takifugu_rubripes
ENSCSAVG00000001385-9954.159ENSTNIG00000013675puf60b9654.476Tetraodon_nigroviridis
ENSCSAVG00000001385-9951.845ENSTNIG00000003069-9652.601Tetraodon_nigroviridis
ENSCSAVG00000001385-8544.771ENSTBEG00000001899-10044.898Tupaia_belangeri
ENSCSAVG00000001385-5656.701ENSTBEG00000002751-9556.701Tupaia_belangeri
ENSCSAVG00000001385-9953.565ENSTTRG00000017088PUF609853.524Tursiops_truncatus
ENSCSAVG00000001385-9955.192ENSUAMG00000024917PUF609555.556Ursus_americanus
ENSCSAVG00000001385-9951.346ENSUMAG00000000272PUF609050.958Ursus_maritimus
ENSCSAVG00000001385-9955.192ENSVVUG00000022527PUF609854.857Vulpes_vulpes
ENSCSAVG00000001385-9955.725ENSXETG00000012469puf609556.023Xenopus_tropicalis
ENSCSAVG00000001385-9953.868ENSXCOG00000012355puf60b9753.817Xiphophorus_couchianus
ENSCSAVG00000001385-9954.118ENSXMAG00000010507-9552.510Xiphophorus_maculatus
ENSCSAVG00000001385-9954.143ENSXMAG00000001862puf60b9754.286Xiphophorus_maculatus

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