EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001404 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3374 bases
Position: chrreftig_30:434246-437619
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002402	Mpp10	PF04006.12	1.2e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002441	-	1053	-	ENSCSAVP00000002402	317 (aa)	-	H2YAQ4

Gene Model

Click here to download ENSCSAVG00000001404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001404	-	82	51.481	ENSBTAG00000031458	-	89	50.746	Bos_taurus
ENSCSAVG00000001404	-	69	53.846	ENSCAPG00000003922	MPHOSPH10	54	47.059	Cavia_aperea
ENSCSAVG00000001404	-	92	43.289	ENSCCAG00000028245	-	63	42.671	Cebus_capucinus
ENSCSAVG00000001404	-	96	76.238	ENSCING00000002729	-	53	75.161	Ciona_intestinalis
ENSCSAVG00000001404	-	91	49.832	ENSETEG00000016641	MPHOSPH10	71	49.832	Echinops_telfairi
ENSCSAVG00000001404	-	92	46.980	ENSGACG00000015478	mphosph10	88	48.201	Gasterosteus_aculeatus
ENSCSAVG00000001404	-	92	48.993	ENSMMUG00000008397	MPHOSPH10	55	49.664	Macaca_mulatta
ENSCSAVG00000001404	-	88	49.826	ENSMLEG00000031602	MPHOSPH10	50	48.077	Mandrillus_leucophaeus
ENSCSAVG00000001404	-	79	50.579	ENSMOCG00000022132	-	83	50.584	Microtus_ochrogaster
ENSCSAVG00000001404	-	67	42.174	ENSMLUG00000005533	-	87	48.387	Myotis_lucifugus
ENSCSAVG00000001404	-	79	45.669	ENSODEG00000001855	-	86	48.031	Octodon_degus
ENSCSAVG00000001404	-	74	43.254	ENSOANG00000010367	-	89	47.059	Ornithorhynchus_anatinus
ENSCSAVG00000001404	-	92	47.000	ENSORLG00015013001	mphosph10	53	44.194	Oryzias_latipes_hsok
ENSCSAVG00000001404	-	55	53.179	ENSOGAG00000003177	-	73	59.155	Otolemur_garnettii
ENSCSAVG00000001404	-	79	49.609	ENSPEMG00000019667	-	83	50.000	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001404	-	91	48.136	ENSPCOG00000011741	-	58	47.896	Propithecus_coquereli
ENSCSAVG00000001404	-	71	45.887	ENSSBOG00000026359	-	80	43.668	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001404	-	92	48.829	ENSUAMG00000000856	MPHOSPH10	90	50.538	Ursus_americanus