EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001436 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7099 bases
Position: chrreftig_3:54331-61429
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002440	DEAD	PF00270.29	8.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002479	-	2350	-	ENSCSAVP00000002440	700 (aa)	-	H2YAU2

Gene Model

Click here to download ENSCSAVG00000001436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001436	-	55	30.256	ENSCSAVG00000008916	-	98	30.256
ENSCSAVG00000001436	-	59	30.861	ENSCSAVG00000004304	-	55	31.204
ENSCSAVG00000001436	-	66	32.181	ENSCSAVG00000011566	-	88	32.181
ENSCSAVG00000001436	-	61	33.643	ENSCSAVG00000000522	-	84	33.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001436	-	70	66.667	ENSG00000089737	DDX24	91	47.166	Homo_sapiens
ENSCSAVG00000001436	-	78	50.463	ENSAPOG00000014909	ddx24	72	44.514	Acanthochromis_polyacanthus
ENSCSAVG00000001436	-	74	55.172	ENSAMEG00000015848	DDX24	79	48.394	Ailuropoda_melanoleuca
ENSCSAVG00000001436	-	73	43.158	ENSACIG00000024338	ddx24	95	44.343	Amphilophus_citrinellus
ENSCSAVG00000001436	-	82	43.887	ENSAOCG00000006168	ddx24	68	45.156	Amphiprion_ocellaris
ENSCSAVG00000001436	-	82	43.799	ENSAPEG00000023765	ddx24	70	43.642	Amphiprion_percula
ENSCSAVG00000001436	-	82	50.877	ENSATEG00000022048	ddx24	72	43.932	Anabas_testudineus
ENSCSAVG00000001436	-	83	44.888	ENSAPLG00000011111	DDX24	94	40.464	Anas_platyrhynchos
ENSCSAVG00000001436	-	83	45.793	ENSACAG00000008545	DDX24	91	41.417	Anolis_carolinensis
ENSCSAVG00000001436	-	74	58.537	ENSANAG00000003080	DDX24	91	47.500	Aotus_nancymaae
ENSCSAVG00000001436	-	83	46.022	ENSACLG00000022194	ddx24	73	46.178	Astatotilapia_calliptera
ENSCSAVG00000001436	-	83	45.216	ENSAMXG00000014635	ddx24	77	43.612	Astyanax_mexicanus
ENSCSAVG00000001436	-	71	65.217	ENSBTAG00000003423	DDX24	77	48.724	Bos_taurus
ENSCSAVG00000001436	-	87	40.128	WBGene00018890	F55F8.2	77	40.128	Caenorhabditis_elegans
ENSCSAVG00000001436	-	77	47.664	ENSCJAG00000009683	DDX24	88	47.674	Callithrix_jacchus
ENSCSAVG00000001436	-	77	44.746	ENSCAFG00000017624	DDX24	91	39.894	Canis_familiaris
ENSCSAVG00000001436	-	75	54.444	ENSCAFG00020014505	DDX24	81	48.165	Canis_lupus_dingo
ENSCSAVG00000001436	-	73	57.317	ENSCHIG00000010074	DDX24	80	48.730	Capra_hircus
ENSCSAVG00000001436	-	61	44.522	ENSTSYG00000025429	-	95	44.522	Carlito_syrichta
ENSCSAVG00000001436	-	66	72.222	ENSTSYG00000030376	-	93	43.580	Carlito_syrichta
ENSCSAVG00000001436	-	64	45.987	ENSCAPG00000007592	DDX24	89	39.110	Cavia_aperea
ENSCSAVG00000001436	-	76	54.118	ENSCPOG00000005884	DDX24	91	41.026	Cavia_porcellus
ENSCSAVG00000001436	-	73	58.537	ENSCCAG00000036112	DDX24	88	48.028	Cebus_capucinus
ENSCSAVG00000001436	-	73	59.756	ENSCATG00000038277	DDX24	79	47.273	Cercocebus_atys
ENSCSAVG00000001436	-	93	45.671	ENSCLAG00000011454	DDX24	82	45.671	Chinchilla_lanigera
ENSCSAVG00000001436	-	79	48.598	ENSCSAG00000010975	DDX24	81	46.288	Chlorocebus_sabaeus
ENSCSAVG00000001436	-	57	48.829	ENSCHOG00000008649	DDX24	66	46.769	Choloepus_hoffmanni
ENSCSAVG00000001436	-	80	46.040	ENSCPBG00000008942	DDX24	94	41.215	Chrysemys_picta_bellii
ENSCSAVG00000001436	-	95	70.228	ENSCING00000003655	-	99	71.652	Ciona_intestinalis
ENSCSAVG00000001436	-	79	48.598	ENSCANG00000035722	-	81	46.507	Colobus_angolensis_palliatus
ENSCSAVG00000001436	-	64	45.714	ENSCANG00000031880	-	79	45.714	Colobus_angolensis_palliatus
ENSCSAVG00000001436	-	77	53.684	ENSCGRG00001009522	Ddx24	79	47.875	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001436	-	77	53.684	ENSCGRG00000015047	Ddx24	79	47.875	Cricetulus_griseus_crigri
ENSCSAVG00000001436	-	79	54.369	ENSCSEG00000001004	ddx24	73	43.206	Cynoglossus_semilaevis
ENSCSAVG00000001436	-	66	47.134	ENSCVAG00000005890	ddx24	89	46.138	Cyprinodon_variegatus
ENSCSAVG00000001436	-	77	45.455	ENSDARG00000104708	ddx24	81	43.513	Danio_rerio
ENSCSAVG00000001436	-	75	56.667	ENSDNOG00000005339	DDX24	79	47.727	Dasypus_novemcinctus
ENSCSAVG00000001436	-	72	65.714	ENSDORG00000003636	Ddx24	96	50.909	Dipodomys_ordii
ENSCSAVG00000001436	-	76	45.184	FBgn0034496	CG9143	70	45.184	Drosophila_melanogaster
ENSCSAVG00000001436	-	78	58.537	ENSETEG00000009693	DDX24	90	43.590	Echinops_telfairi
ENSCSAVG00000001436	-	73	40.072	ENSEBUG00000015781	-	82	40.072	Eptatretus_burgeri
ENSCSAVG00000001436	-	71	65.714	ENSEASG00005021430	DDX24	82	45.781	Equus_asinus_asinus
ENSCSAVG00000001436	-	72	65.714	ENSECAG00000008887	DDX24	82	45.781	Equus_caballus
ENSCSAVG00000001436	-	82	50.980	ENSEEUG00000001618	DDX24	90	44.338	Erinaceus_europaeus
ENSCSAVG00000001436	-	78	50.000	ENSELUG00000009567	ddx24	68	50.000	Esox_lucius
ENSCSAVG00000001436	-	90	48.980	ENSFCAG00000010229	DDX24	78	48.980	Felis_catus
ENSCSAVG00000001436	-	79	45.819	ENSFALG00000002491	DDX24	94	41.169	Ficedula_albicollis
ENSCSAVG00000001436	-	92	48.165	ENSFDAG00000014561	DDX24	78	48.165	Fukomys_damarensis
ENSCSAVG00000001436	-	82	45.089	ENSFHEG00000010949	ddx24	92	40.649	Fundulus_heteroclitus
ENSCSAVG00000001436	-	81	46.053	ENSGMOG00000010403	ddx24	89	41.289	Gadus_morhua
ENSCSAVG00000001436	-	81	46.230	ENSGALG00000010884	DDX24	93	41.379	Gallus_gallus
ENSCSAVG00000001436	-	63	49.107	ENSGAFG00000009607	ddx24	89	49.884	Gambusia_affinis
ENSCSAVG00000001436	-	82	44.866	ENSGACG00000008087	ddx24	75	45.656	Gasterosteus_aculeatus
ENSCSAVG00000001436	-	76	60.976	ENSGGOG00000006739	DDX24	95	47.887	Gorilla_gorilla
ENSCSAVG00000001436	-	83	46.022	ENSHBUG00000021747	ddx24	73	46.178	Haplochromis_burtoni
ENSCSAVG00000001436	-	95	37.379	ENSHGLG00000010321	-	91	38.514	Heterocephalus_glaber_female
ENSCSAVG00000001436	-	75	44.737	ENSHGLG00000003177	-	91	38.609	Heterocephalus_glaber_female
ENSCSAVG00000001436	-	92	46.204	ENSHGLG00100013439	DDX24	81	46.204	Heterocephalus_glaber_male
ENSCSAVG00000001436	-	79	55.882	ENSHCOG00000019867	ddx24	77	43.524	Hippocampus_comes
ENSCSAVG00000001436	-	79	47.865	ENSIPUG00000007005	ddx24	75	47.865	Ictalurus_punctatus
ENSCSAVG00000001436	-	74	56.322	ENSSTOG00000005355	DDX24	80	47.727	Ictidomys_tridecemlineatus
ENSCSAVG00000001436	-	74	64.286	ENSJJAG00000010842	Ddx24	80	46.239	Jaculus_jaculus
ENSCSAVG00000001436	-	77	47.297	ENSKMAG00000004507	ddx24	72	46.935	Kryptolebias_marmoratus
ENSCSAVG00000001436	-	76	54.000	ENSLBEG00000020888	ddx24	77	40.669	Labrus_bergylta
ENSCSAVG00000001436	-	94	41.444	ENSLACG00000006072	DDX24	92	42.056	Latimeria_chalumnae
ENSCSAVG00000001436	-	81	47.255	ENSLOCG00000012997	ddx24	91	42.740	Lepisosteus_oculatus
ENSCSAVG00000001436	-	74	68.571	ENSLAFG00000029076	DDX24	82	46.288	Loxodonta_africana
ENSCSAVG00000001436	-	77	48.598	ENSMFAG00000033695	DDX24	79	47.273	Macaca_fascicularis
ENSCSAVG00000001436	-	69	56.604	ENSMMUG00000007763	DDX24	97	47.597	Macaca_mulatta
ENSCSAVG00000001436	-	77	48.598	ENSMNEG00000043984	DDX24	79	47.273	Macaca_nemestrina
ENSCSAVG00000001436	-	79	48.598	ENSMLEG00000039614	DDX24	81	46.070	Mandrillus_leucophaeus
ENSCSAVG00000001436	-	73	62.500	ENSMAMG00000003235	ddx24	69	45.470	Mastacembelus_armatus
ENSCSAVG00000001436	-	83	46.022	ENSMZEG00005008402	ddx24	73	46.178	Maylandia_zebra
ENSCSAVG00000001436	-	81	46.154	ENSMGAG00000013175	DDX24	95	41.480	Meleagris_gallopavo
ENSCSAVG00000001436	-	78	53.061	ENSMAUG00000020026	Ddx24	80	47.566	Mesocricetus_auratus
ENSCSAVG00000001436	-	74	53.191	ENSMICG00000008376	DDX24	79	48.485	Microcebus_murinus
ENSCSAVG00000001436	-	75	53.684	ENSMOCG00000013171	Ddx24	79	47.597	Microtus_ochrogaster
ENSCSAVG00000001436	-	86	48.380	ENSMMOG00000013945	ddx24	93	50.575	Mola_mola
ENSCSAVG00000001436	-	77	47.009	ENSMODG00000002336	DDX24	92	41.356	Monodelphis_domestica
ENSCSAVG00000001436	-	77	45.172	ENSMALG00000007688	ddx24	69	45.172	Monopterus_albus
ENSCSAVG00000001436	-	74	65.714	MGP_CAROLIEiJ_G0018053	Ddx24	81	46.222	Mus_caroli
ENSCSAVG00000001436	-	74	65.714	ENSMUSG00000041645	Ddx24	80	50.646	Mus_musculus
ENSCSAVG00000001436	-	65	65.714	MGP_SPRETEiJ_G0018898	Ddx24	78	40.000	Mus_spretus
ENSCSAVG00000001436	-	92	48.394	ENSMPUG00000003318	DDX24	82	47.939	Mustela_putorius_furo
ENSCSAVG00000001436	-	73	59.756	ENSMLUG00000001158	DDX24	80	48.276	Myotis_lucifugus
ENSCSAVG00000001436	-	78	50.000	ENSNGAG00000001003	-	83	45.895	Nannospalax_galili
ENSCSAVG00000001436	-	75	56.579	ENSNGAG00000014769	-	82	42.572	Nannospalax_galili
ENSCSAVG00000001436	-	83	45.398	ENSNBRG00000007296	ddx24	73	45.398	Neolamprologus_brichardi
ENSCSAVG00000001436	-	61	42.563	ENSNLEG00000017240	DDX24	75	42.563	Nomascus_leucogenys
ENSCSAVG00000001436	-	69	52.880	ENSMEUG00000010386	-	81	52.880	Notamacropus_eugenii
ENSCSAVG00000001436	-	83	46.966	ENSOPRG00000000562	DDX24	93	43.385	Ochotona_princeps
ENSCSAVG00000001436	-	97	44.172	ENSODEG00000002236	-	97	46.868	Octodon_degus
ENSCSAVG00000001436	-	79	46.493	ENSONIG00000020143	ddx24	75	46.009	Oreochromis_niloticus
ENSCSAVG00000001436	-	53	32.905	ENSOANG00000002839	-	100	32.905	Ornithorhynchus_anatinus
ENSCSAVG00000001436	-	81	44.895	ENSOANG00000014362	DDX24	94	40.658	Ornithorhynchus_anatinus
ENSCSAVG00000001436	-	89	47.696	ENSOCUG00000002604	DDX24	78	47.696	Oryctolagus_cuniculus
ENSCSAVG00000001436	-	81	44.409	ENSORLG00000004581	ddx24	74	44.409	Oryzias_latipes
ENSCSAVG00000001436	-	81	44.089	ENSORLG00020008743	ddx24	74	44.089	Oryzias_latipes_hni
ENSCSAVG00000001436	-	89	43.025	ENSORLG00015007758	ddx24	79	42.878	Oryzias_latipes_hsok
ENSCSAVG00000001436	-	83	43.949	ENSOMEG00000023149	ddx24	92	40.077	Oryzias_melastigma
ENSCSAVG00000001436	-	73	56.977	ENSOGAG00000005841	DDX24	77	48.951	Otolemur_garnettii
ENSCSAVG00000001436	-	71	65.217	ENSOARG00000014341	DDX24	78	48.848	Ovis_aries
ENSCSAVG00000001436	-	79	49.533	ENSPPAG00000038713	DDX24	89	47.674	Pan_paniscus
ENSCSAVG00000001436	-	90	49.083	ENSPPRG00000007394	DDX24	78	49.083	Panthera_pardus
ENSCSAVG00000001436	-	90	48.853	ENSPTIG00000013158	DDX24	78	48.853	Panthera_tigris_altaica
ENSCSAVG00000001436	-	77	49.533	ENSPTRG00000006673	DDX24	88	47.442	Pan_troglodytes
ENSCSAVG00000001436	-	79	48.598	ENSPANG00000022385	DDX24	81	46.288	Papio_anubis
ENSCSAVG00000001436	-	76	62.667	ENSPKIG00000005168	ddx24	91	49.138	Paramormyrops_kingsleyae
ENSCSAVG00000001436	-	82	46.217	ENSPSIG00000009329	DDX24	93	41.944	Pelodiscus_sinensis
ENSCSAVG00000001436	-	65	46.739	ENSPMGG00000019572	ddx24	95	46.739	Periophthalmus_magnuspinnatus
ENSCSAVG00000001436	-	76	50.000	ENSPEMG00000018618	Ddx24	80	47.153	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001436	-	81	46.053	ENSPCIG00000026635	DDX24	92	42.287	Phascolarctos_cinereus
ENSCSAVG00000001436	-	78	47.059	ENSPFOG00000011214	ddx24	90	48.980	Poecilia_formosa
ENSCSAVG00000001436	-	76	47.260	ENSPLAG00000010940	ddx24	89	49.885	Poecilia_latipinna
ENSCSAVG00000001436	-	61	49.192	ENSPMEG00000006458	ddx24	89	49.423	Poecilia_mexicana
ENSCSAVG00000001436	-	78	46.566	ENSPREG00000014459	ddx24	88	49.885	Poecilia_reticulata
ENSCSAVG00000001436	-	79	49.533	ENSPPYG00000006095	DDX24	81	46.288	Pongo_abelii
ENSCSAVG00000001436	-	93	48.244	ENSPCAG00000002873	DDX24	80	48.244	Procavia_capensis
ENSCSAVG00000001436	-	82	51.515	ENSPCOG00000018298	DDX24	84	44.737	Propithecus_coquereli
ENSCSAVG00000001436	-	75	59.756	ENSPVAG00000015101	DDX24	81	46.903	Pteropus_vampyrus
ENSCSAVG00000001436	-	83	45.866	ENSPNYG00000022795	ddx24	73	46.022	Pundamilia_nyererei
ENSCSAVG00000001436	-	78	49.078	ENSPNAG00000008956	ddx24	79	49.078	Pygocentrus_nattereri
ENSCSAVG00000001436	-	64	46.222	ENSRNOG00000009166	Ddx24	82	46.222	Rattus_norvegicus
ENSCSAVG00000001436	-	70	63.636	ENSRBIG00000039022	DDX24	89	46.977	Rhinopithecus_bieti
ENSCSAVG00000001436	-	79	47.664	ENSRROG00000023933	-	88	43.721	Rhinopithecus_roxellana
ENSCSAVG00000001436	-	64	44.176	ENSRROG00000039473	-	88	45.116	Rhinopithecus_roxellana
ENSCSAVG00000001436	-	70	33.755	YBR142W	-	66	33.755	Saccharomyces_cerevisiae
ENSCSAVG00000001436	-	73	58.537	ENSSBOG00000035521	DDX24	97	47.511	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001436	-	81	47.245	ENSSHAG00000009060	DDX24	91	42.934	Sarcophilus_harrisii
ENSCSAVG00000001436	-	76	56.044	ENSSFOG00015015044	ddx24	73	45.182	Scleropages_formosus
ENSCSAVG00000001436	-	75	57.292	ENSSMAG00000002784	ddx24	72	43.701	Scophthalmus_maximus
ENSCSAVG00000001436	-	83	47.500	ENSSDUG00000001658	ddx24	83	41.233	Seriola_dumerili
ENSCSAVG00000001436	-	83	47.500	ENSSLDG00000019202	ddx24	83	39.896	Seriola_lalandi_dorsalis
ENSCSAVG00000001436	-	57	61.404	ENSSARG00000005126	DDX24	65	45.690	Sorex_araneus
ENSCSAVG00000001436	-	80	45.591	ENSSPUG00000017730	DDX24	89	42.047	Sphenodon_punctatus
ENSCSAVG00000001436	-	79	44.517	ENSSPAG00000011620	ddx24	70	44.681	Stegastes_partitus
ENSCSAVG00000001436	-	77	65.714	ENSSSCG00000002470	DDX24	81	49.541	Sus_scrofa
ENSCSAVG00000001436	-	62	49.203	ENSTGUG00000012637	-	93	49.203	Taeniopygia_guttata
ENSCSAVG00000001436	-	81	44.915	ENSTRUG00000006101	ddx24	91	39.062	Takifugu_rubripes
ENSCSAVG00000001436	-	80	45.709	ENSTNIG00000017368	ddx24	91	40.788	Tetraodon_nigroviridis
ENSCSAVG00000001436	-	72	62.162	ENSTTRG00000008795	DDX24	77	48.492	Tursiops_truncatus
ENSCSAVG00000001436	-	62	45.727	ENSUAMG00000024662	DDX24	89	45.727	Ursus_americanus
ENSCSAVG00000001436	-	72	61.333	ENSUMAG00000004481	DDX24	78	48.624	Ursus_maritimus
ENSCSAVG00000001436	-	75	54.444	ENSVVUG00000018672	DDX24	91	40.160	Vulpes_vulpes
ENSCSAVG00000001436	-	95	41.838	ENSXETG00000010314	ddx24	77	47.098	Xenopus_tropicalis
ENSCSAVG00000001436	-	63	48.222	ENSXMAG00000013600	ddx24	84	48.444	Xiphophorus_maculatus