EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001450 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7755 bases
Position: chrreftig_3:72576-80330
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002456	eIF-3_zeta	PF05091.12	5.3e-204	1	1
ENSCSAVP00000002457	eIF-3_zeta	PF05091.12	1.8e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002497	-	1977	-	ENSCSAVP00000002456	563 (aa)	-	H2YAV8
ENSCSAVT00000002498	-	1488	-	ENSCSAVP00000002457	254 (aa)	-	H2YAV9

Gene Model

Click here to download ENSCSAVG00000001450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001450	-	89	70.000	ENSG00000100353	EIF3D	99	62.057	Homo_sapiens
ENSCSAVG00000001450	-	96	63.919	ENSAPOG00000002054	eif3d	98	63.653	Acanthochromis_polyacanthus
ENSCSAVG00000001450	-	89	69.565	ENSAMEG00000009639	EIF3D	99	61.879	Ailuropoda_melanoleuca
ENSCSAVG00000001450	-	96	63.553	ENSACIG00000013847	eif3d	97	62.877	Amphilophus_citrinellus
ENSCSAVG00000001450	-	54	58.252	ENSAOCG00000005916	-	97	58.252	Amphiprion_ocellaris
ENSCSAVG00000001450	-	96	63.919	ENSAOCG00000022455	eif3d	99	62.943	Amphiprion_ocellaris
ENSCSAVG00000001450	-	96	63.919	ENSAPEG00000020361	eif3d	99	62.943	Amphiprion_percula
ENSCSAVG00000001450	-	96	63.553	ENSATEG00000020784	eif3d	99	62.589	Anabas_testudineus
ENSCSAVG00000001450	-	97	56.569	ENSAPLG00000002632	EIF3D	100	56.204	Anas_platyrhynchos
ENSCSAVG00000001450	-	96	62.637	ENSACAG00000016308	EIF3D	99	62.345	Anolis_carolinensis
ENSCSAVG00000001450	-	89	70.000	ENSANAG00000026835	EIF3D	99	62.057	Aotus_nancymaae
ENSCSAVG00000001450	-	89	70.435	ENSACLG00000021768	EIF3D	85	65.023	Astatotilapia_calliptera
ENSCSAVG00000001450	-	96	63.919	ENSACLG00000021167	eif3d	99	63.327	Astatotilapia_calliptera
ENSCSAVG00000001450	-	89	70.435	ENSACLG00000021430	EIF3D	93	65.023	Astatotilapia_calliptera
ENSCSAVG00000001450	-	89	70.435	ENSACLG00000021712	eif3d	81	65.023	Astatotilapia_calliptera
ENSCSAVG00000001450	-	89	70.435	ENSACLG00000021852	eif3d	85	65.023	Astatotilapia_calliptera
ENSCSAVG00000001450	-	96	65.018	ENSAMXG00000017547	eif3d	99	64.539	Astyanax_mexicanus
ENSCSAVG00000001450	-	89	70.000	ENSBTAG00000001988	EIF3D	99	62.057	Bos_taurus
ENSCSAVG00000001450	-	95	45.063	WBGene00001227	eif-3.D	99	44.692	Caenorhabditis_elegans
ENSCSAVG00000001450	-	89	70.000	ENSCJAG00000013831	EIF3D	99	66.359	Callithrix_jacchus
ENSCSAVG00000001450	-	89	69.565	ENSCAFG00000001544	EIF3D	99	62.057	Canis_familiaris
ENSCSAVG00000001450	-	89	69.565	ENSCAFG00020004483	EIF3D	99	62.057	Canis_lupus_dingo
ENSCSAVG00000001450	-	89	70.000	ENSCHIG00000012106	EIF3D	99	62.057	Capra_hircus
ENSCSAVG00000001450	-	89	70.000	ENSTSYG00000008540	EIF3D	99	66.820	Carlito_syrichta
ENSCSAVG00000001450	-	89	70.000	ENSCAPG00000015164	EIF3D	97	61.250	Cavia_aperea
ENSCSAVG00000001450	-	89	70.000	ENSCPOG00000002529	EIF3D	99	61.702	Cavia_porcellus
ENSCSAVG00000001450	-	89	70.000	ENSCCAG00000027331	EIF3D	99	62.057	Cebus_capucinus
ENSCSAVG00000001450	-	89	70.000	ENSCATG00000045003	EIF3D	99	62.057	Cercocebus_atys
ENSCSAVG00000001450	-	89	70.000	ENSCLAG00000016545	EIF3D	99	62.433	Chinchilla_lanigera
ENSCSAVG00000001450	-	89	70.000	ENSCSAG00000007898	EIF3D	99	62.433	Chlorocebus_sabaeus
ENSCSAVG00000001450	-	96	60.623	ENSCHOG00000004811	EIF3D	99	60.213	Choloepus_hoffmanni
ENSCSAVG00000001450	-	96	62.637	ENSCPBG00000016309	EIF3D	99	62.612	Chrysemys_picta_bellii
ENSCSAVG00000001450	-	96	92.052	ENSCING00000003680	-	99	91.444	Ciona_intestinalis
ENSCSAVG00000001450	-	89	70.000	ENSCANG00000031179	EIF3D	99	62.057	Colobus_angolensis_palliatus
ENSCSAVG00000001450	-	89	70.000	ENSCGRG00001016584	EIF3D	99	61.879	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001450	-	89	70.000	ENSCGRG00000000302	EIF3D	99	61.879	Cricetulus_griseus_crigri
ENSCSAVG00000001450	-	98	63.472	ENSCSEG00000020548	eif3d	99	63.186	Cynoglossus_semilaevis
ENSCSAVG00000001450	-	89	69.130	ENSCVAG00000001999	eif3d	87	78.182	Cyprinodon_variegatus
ENSCSAVG00000001450	-	96	63.919	ENSDARG00000021257	eif3d	100	80.488	Danio_rerio
ENSCSAVG00000001450	-	53	55.667	ENSDNOG00000018482	EIF3D	92	55.667	Dasypus_novemcinctus
ENSCSAVG00000001450	-	89	70.000	ENSDORG00000010491	Eif3d	99	62.234	Dipodomys_ordii
ENSCSAVG00000001450	-	87	66.814	FBgn0040227	eIF3d1	96	54.336	Drosophila_melanogaster
ENSCSAVG00000001450	-	91	57.511	FBgn0037994	eIF3d2	98	48.399	Drosophila_melanogaster
ENSCSAVG00000001450	-	94	53.160	ENSETEG00000002070	-	99	53.160	Echinops_telfairi
ENSCSAVG00000001450	-	55	50.442	ENSETEG00000020233	-	95	50.442	Echinops_telfairi
ENSCSAVG00000001450	-	88	62.719	ENSETEG00000009404	-	96	57.990	Echinops_telfairi
ENSCSAVG00000001450	-	86	62.613	ENSETEG00000016315	-	96	58.242	Echinops_telfairi
ENSCSAVG00000001450	-	89	69.130	ENSEBUG00000009405	eif3d	97	66.508	Eptatretus_burgeri
ENSCSAVG00000001450	-	89	70.000	ENSEASG00005018906	EIF3D	99	62.234	Equus_asinus_asinus
ENSCSAVG00000001450	-	89	70.000	ENSECAG00000022413	EIF3D	99	62.411	Equus_caballus
ENSCSAVG00000001450	-	89	69.565	ENSEEUG00000015771	EIF3D	99	56.738	Erinaceus_europaeus
ENSCSAVG00000001450	-	96	63.919	ENSELUG00000018698	eif3d	99	63.298	Esox_lucius
ENSCSAVG00000001450	-	89	69.565	ENSFCAG00000001131	EIF3D	99	61.702	Felis_catus
ENSCSAVG00000001450	-	96	62.637	ENSFALG00000013012	EIF3D	99	61.812	Ficedula_albicollis
ENSCSAVG00000001450	-	89	70.000	ENSFDAG00000004352	EIF3D	99	61.879	Fukomys_damarensis
ENSCSAVG00000001450	-	96	61.538	ENSGMOG00000013341	eif3d	99	61.181	Gadus_morhua
ENSCSAVG00000001450	-	96	62.637	ENSGALG00000012529	EIF3D	99	61.812	Gallus_gallus
ENSCSAVG00000001450	-	96	67.742	ENSGACG00000014538	eif3d	99	63.298	Gasterosteus_aculeatus
ENSCSAVG00000001450	-	96	62.637	ENSGAGG00000009617	EIF3D	99	62.345	Gopherus_agassizii
ENSCSAVG00000001450	-	89	70.000	ENSGGOG00000003428	EIF3D	99	62.433	Gorilla_gorilla
ENSCSAVG00000001450	-	96	64.103	ENSHBUG00000017230	eif3d	99	63.506	Haplochromis_burtoni
ENSCSAVG00000001450	-	89	70.000	ENSHGLG00000016422	-	99	61.702	Heterocephalus_glaber_female
ENSCSAVG00000001450	-	96	48.270	ENSHGLG00000000135	-	99	47.703	Heterocephalus_glaber_female
ENSCSAVG00000001450	-	96	52.294	ENSHGLG00000006449	-	99	51.812	Heterocephalus_glaber_female
ENSCSAVG00000001450	-	96	51.730	ENSHGLG00100001321	-	99	51.060	Heterocephalus_glaber_male
ENSCSAVG00000001450	-	89	70.000	ENSHGLG00100007477	-	99	61.702	Heterocephalus_glaber_male
ENSCSAVG00000001450	-	96	52.126	ENSHGLG00100013710	-	99	51.642	Heterocephalus_glaber_male
ENSCSAVG00000001450	-	96	63.553	ENSHCOG00000007799	eif3d	99	63.009	Hippocampus_comes
ENSCSAVG00000001450	-	96	64.286	ENSIPUG00000017267	eif3d	99	63.717	Ictalurus_punctatus
ENSCSAVG00000001450	-	89	70.000	ENSSTOG00000011335	EIF3D	99	62.234	Ictidomys_tridecemlineatus
ENSCSAVG00000001450	-	89	70.000	ENSJJAG00000010854	Eif3d	99	61.879	Jaculus_jaculus
ENSCSAVG00000001450	-	94	68.163	ENSKMAG00000007133	eif3d	99	62.766	Kryptolebias_marmoratus
ENSCSAVG00000001450	-	96	63.919	ENSLBEG00000005296	eif3d	99	62.943	Labrus_bergylta
ENSCSAVG00000001450	-	89	69.565	ENSLACG00000001606	EIF3D	97	60.993	Latimeria_chalumnae
ENSCSAVG00000001450	-	96	62.271	ENSLAFG00000001714	EIF3D	97	62.271	Loxodonta_africana
ENSCSAVG00000001450	-	89	70.000	ENSMFAG00000000481	EIF3D	99	66.359	Macaca_fascicularis
ENSCSAVG00000001450	-	89	70.000	ENSMMUG00000012754	EIF3D	99	62.692	Macaca_mulatta
ENSCSAVG00000001450	-	89	70.000	ENSMNEG00000012843	EIF3D	99	66.359	Macaca_nemestrina
ENSCSAVG00000001450	-	89	70.000	ENSMLEG00000037251	EIF3D	99	66.359	Mandrillus_leucophaeus
ENSCSAVG00000001450	-	96	63.919	ENSMAMG00000020219	eif3d	99	63.327	Mastacembelus_armatus
ENSCSAVG00000001450	-	96	64.103	ENSMZEG00005023294	eif3d	99	63.506	Maylandia_zebra
ENSCSAVG00000001450	-	89	70.435	ENSMZEG00005024006	eif3d	99	60.823	Maylandia_zebra
ENSCSAVG00000001450	-	55	58.252	ENSMGAG00000012653	EIF3D	100	56.958	Meleagris_gallopavo
ENSCSAVG00000001450	-	89	70.000	ENSMAUG00000013161	Eif3d	99	61.879	Mesocricetus_auratus
ENSCSAVG00000001450	-	89	70.000	ENSMICG00000012161	EIF3D	99	66.820	Microcebus_murinus
ENSCSAVG00000001450	-	89	70.000	ENSMOCG00000011605	Eif3d	99	61.879	Microtus_ochrogaster
ENSCSAVG00000001450	-	96	63.187	ENSMMOG00000021496	eif3d	99	62.791	Mola_mola
ENSCSAVG00000001450	-	89	70.000	ENSMODG00000000821	EIF3D	99	62.057	Monodelphis_domestica
ENSCSAVG00000001450	-	96	63.553	ENSMALG00000019436	eif3d	99	62.589	Monopterus_albus
ENSCSAVG00000001450	-	89	70.000	MGP_CAROLIEiJ_G0019973	Eif3d	99	61.879	Mus_caroli
ENSCSAVG00000001450	-	89	70.000	ENSMUSG00000016554	Eif3d	99	61.879	Mus_musculus
ENSCSAVG00000001450	-	89	70.000	MGP_PahariEiJ_G0019975	Eif3d	99	61.879	Mus_pahari
ENSCSAVG00000001450	-	89	70.000	MGP_SPRETEiJ_G0020871	Eif3d	99	61.879	Mus_spretus
ENSCSAVG00000001450	-	70	63.934	ENSMPUG00000012581	EIF3D	100	42.204	Mustela_putorius_furo
ENSCSAVG00000001450	-	89	70.000	ENSMLUG00000015857	EIF3D	99	62.234	Myotis_lucifugus
ENSCSAVG00000001450	-	89	70.000	ENSNGAG00000012038	Eif3d	99	61.702	Nannospalax_galili
ENSCSAVG00000001450	-	89	70.000	ENSNLEG00000014560	EIF3D	99	66.359	Nomascus_leucogenys
ENSCSAVG00000001450	-	89	70.000	ENSMEUG00000004561	EIF3D	99	62.075	Notamacropus_eugenii
ENSCSAVG00000001450	-	89	68.696	ENSOPRG00000006924	EIF3D	99	57.791	Ochotona_princeps
ENSCSAVG00000001450	-	89	70.000	ENSODEG00000011039	EIF3D	99	61.525	Octodon_degus
ENSCSAVG00000001450	-	96	63.736	ENSONIG00000009713	eif3d	99	62.766	Oreochromis_niloticus
ENSCSAVG00000001450	-	97	54.902	ENSOANG00000007483	EIF3D	100	54.902	Ornithorhynchus_anatinus
ENSCSAVG00000001450	-	89	70.000	ENSOCUG00000006363	EIF3D	99	62.057	Oryctolagus_cuniculus
ENSCSAVG00000001450	-	97	61.974	ENSORLG00000001449	eif3d	97	63.556	Oryzias_latipes
ENSCSAVG00000001450	-	96	62.821	ENSORLG00020000383	eif3d	98	62.234	Oryzias_latipes_hni
ENSCSAVG00000001450	-	53	56.667	ENSORLG00020013943	eif3d	96	56.667	Oryzias_latipes_hni
ENSCSAVG00000001450	-	53	58.000	ENSORLG00015006930	eif3d	90	58.000	Oryzias_latipes_hsok
ENSCSAVG00000001450	-	56	55.096	ENSORLG00015006954	eif3d	99	55.096	Oryzias_latipes_hsok
ENSCSAVG00000001450	-	53	55.667	ENSOMEG00000017337	eif3d	95	55.667	Oryzias_melastigma
ENSCSAVG00000001450	-	53	54.333	ENSOMEG00000017372	eif3d	95	54.333	Oryzias_melastigma
ENSCSAVG00000001450	-	89	70.000	ENSOGAG00000002978	EIF3D	99	62.057	Otolemur_garnettii
ENSCSAVG00000001450	-	89	70.000	ENSOARG00000018926	EIF3D	99	62.057	Ovis_aries
ENSCSAVG00000001450	-	89	70.000	ENSPPAG00000031183	EIF3D	99	62.057	Pan_paniscus
ENSCSAVG00000001450	-	89	69.565	ENSPPRG00000007244	EIF3D	99	61.702	Panthera_pardus
ENSCSAVG00000001450	-	96	61.355	ENSPTIG00000012272	EIF3D	99	60.638	Panthera_tigris_altaica
ENSCSAVG00000001450	-	89	70.000	ENSPTRG00000014313	EIF3D	99	62.057	Pan_troglodytes
ENSCSAVG00000001450	-	89	70.000	ENSPANG00000023980	EIF3D	99	62.992	Papio_anubis
ENSCSAVG00000001450	-	96	63.919	ENSPKIG00000013892	eif3d	99	63.363	Paramormyrops_kingsleyae
ENSCSAVG00000001450	-	96	63.004	ENSPSIG00000010983	EIF3D	99	62.522	Pelodiscus_sinensis
ENSCSAVG00000001450	-	95	59.555	ENSPMGG00000004524	eif3d	99	59.555	Periophthalmus_magnuspinnatus
ENSCSAVG00000001450	-	89	70.000	ENSPEMG00000014069	Eif3d	99	61.879	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001450	-	53	58.140	ENSPMAG00000008165	eif3d	97	57.143	Petromyzon_marinus
ENSCSAVG00000001450	-	89	70.000	ENSPCIG00000021563	EIF3D	99	61.634	Phascolarctos_cinereus
ENSCSAVG00000001450	-	96	64.103	ENSPFOG00000007516	eif3d	99	63.121	Poecilia_formosa
ENSCSAVG00000001450	-	96	64.103	ENSPLAG00000015253	eif3d	99	63.121	Poecilia_latipinna
ENSCSAVG00000001450	-	96	64.286	ENSPMEG00000019987	eif3d	99	63.298	Poecilia_mexicana
ENSCSAVG00000001450	-	96	56.593	ENSPPYG00000011774	EIF3D	99	55.993	Pongo_abelii
ENSCSAVG00000001450	-	83	80.159	ENSPCAG00000007788	EIF3D	86	76.224	Procavia_capensis
ENSCSAVG00000001450	-	89	70.000	ENSPCOG00000014552	EIF3D	99	59.752	Propithecus_coquereli
ENSCSAVG00000001450	-	89	70.000	ENSPVAG00000002014	EIF3D	99	62.411	Pteropus_vampyrus
ENSCSAVG00000001450	-	96	64.286	ENSPNYG00000011917	eif3d	99	63.685	Pundamilia_nyererei
ENSCSAVG00000001450	-	96	65.018	ENSPNAG00000000176	eif3d	99	64.184	Pygocentrus_nattereri
ENSCSAVG00000001450	-	89	70.000	ENSRNOG00000005804	Eif3d	99	61.879	Rattus_norvegicus
ENSCSAVG00000001450	-	89	70.000	ENSRBIG00000041563	EIF3D	99	66.359	Rhinopithecus_bieti
ENSCSAVG00000001450	-	89	70.000	ENSRROG00000039588	EIF3D	99	66.359	Rhinopithecus_roxellana
ENSCSAVG00000001450	-	89	70.000	ENSSBOG00000032811	EIF3D	99	62.057	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001450	-	89	70.000	ENSSHAG00000011209	EIF3D	99	61.634	Sarcophilus_harrisii
ENSCSAVG00000001450	-	96	64.103	ENSSFOG00015023800	eif3d	99	63.652	Scleropages_formosus
ENSCSAVG00000001450	-	96	63.736	ENSSMAG00000013962	eif3d	98	66.957	Scophthalmus_maximus
ENSCSAVG00000001450	-	96	63.370	ENSSDUG00000023224	eif3d	99	62.411	Seriola_dumerili
ENSCSAVG00000001450	-	96	63.370	ENSSLDG00000006833	eif3d	99	62.411	Seriola_lalandi_dorsalis
ENSCSAVG00000001450	-	89	70.000	ENSSARG00000012488	EIF3D	99	56.175	Sorex_araneus
ENSCSAVG00000001450	-	96	62.454	ENSSPUG00000011683	EIF3D	99	61.812	Sphenodon_punctatus
ENSCSAVG00000001450	-	96	63.736	ENSSPAG00000003591	eif3d	99	62.766	Stegastes_partitus
ENSCSAVG00000001450	-	89	70.000	ENSSSCG00000000141	EIF3D	99	62.057	Sus_scrofa
ENSCSAVG00000001450	-	96	62.454	ENSTGUG00000010728	EIF3D	99	61.634	Taeniopygia_guttata
ENSCSAVG00000001450	-	96	64.286	ENSTRUG00000007886	eif3d	99	63.830	Takifugu_rubripes
ENSCSAVG00000001450	-	96	67.068	ENSTNIG00000011263	eif3d	99	63.501	Tetraodon_nigroviridis
ENSCSAVG00000001450	-	89	70.000	ENSTBEG00000006268	EIF3D	99	60.612	Tupaia_belangeri
ENSCSAVG00000001450	-	96	62.271	ENSTTRG00000006637	EIF3D	99	61.702	Tursiops_truncatus
ENSCSAVG00000001450	-	89	69.565	ENSUAMG00000017485	EIF3D	99	62.433	Ursus_americanus
ENSCSAVG00000001450	-	89	69.565	ENSUMAG00000015827	EIF3D	99	62.057	Ursus_maritimus
ENSCSAVG00000001450	-	53	50.667	ENSVPAG00000000359	-	99	50.000	Vicugna_pacos
ENSCSAVG00000001450	-	89	69.565	ENSVVUG00000023578	EIF3D	99	62.057	Vulpes_vulpes
ENSCSAVG00000001450	-	96	61.722	ENSXETG00000027259	eif3d	99	61.525	Xenopus_tropicalis
ENSCSAVG00000001450	-	96	62.018	ENSXCOG00000011633	eif3d	100	60.924	Xiphophorus_couchianus
ENSCSAVG00000001450	-	96	64.469	ENSXMAG00000000954	eif3d	99	63.475	Xiphophorus_maculatus