EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001469 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6724 bases
Position: chrreftig_207:123692-130415
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002487	tRNA-synt_1b	PF00579.25	9e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002528	-	1874	-	ENSCSAVP00000002487	460 (aa)	-	H2YAY9

Gene Model

Click here to download ENSCSAVG00000001469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001469	-	93	44.342	ENSG00000139131	YARS2	93	45.985	Homo_sapiens
ENSCSAVG00000001469	-	98	43.777	ENSAPOG00000008208	yars2	97	43.777	Acanthochromis_polyacanthus
ENSCSAVG00000001469	-	93	43.880	ENSAMEG00000008909	YARS2	90	43.880	Ailuropoda_melanoleuca
ENSCSAVG00000001469	-	94	43.218	ENSACIG00000018640	yars2	90	43.218	Amphilophus_citrinellus
ENSCSAVG00000001469	-	94	45.287	ENSAOCG00000005594	yars2	90	45.287	Amphiprion_ocellaris
ENSCSAVG00000001469	-	94	45.287	ENSAPEG00000006952	yars2	90	45.287	Amphiprion_percula
ENSCSAVG00000001469	-	99	42.797	ENSATEG00000019778	yars2	98	42.797	Anabas_testudineus
ENSCSAVG00000001469	-	57	46.947	ENSAPLG00000004982	YARS2	99	46.947	Anas_platyrhynchos
ENSCSAVG00000001469	-	93	42.725	ENSACAG00000012351	YARS2	88	42.725	Anolis_carolinensis
ENSCSAVG00000001469	-	93	44.342	ENSANAG00000026208	YARS2	90	44.342	Aotus_nancymaae
ENSCSAVG00000001469	-	94	45.057	ENSACLG00000026295	yars2	90	45.057	Astatotilapia_calliptera
ENSCSAVG00000001469	-	93	43.750	ENSAMXG00000015193	yars2	86	43.750	Astyanax_mexicanus
ENSCSAVG00000001469	-	93	43.779	ENSBTAG00000011399	YARS2	90	43.779	Bos_taurus
ENSCSAVG00000001469	-	87	36.049	WBGene00006968	yars-2	92	36.246	Caenorhabditis_elegans
ENSCSAVG00000001469	-	93	44.804	ENSCJAG00000018129	YARS2	90	44.804	Callithrix_jacchus
ENSCSAVG00000001469	-	93	44.573	ENSCAFG00000010496	YARS2	90	44.573	Canis_familiaris
ENSCSAVG00000001469	-	93	44.573	ENSCAFG00020019713	YARS2	90	44.573	Canis_lupus_dingo
ENSCSAVG00000001469	-	93	44.009	ENSCHIG00000002520	YARS2	92	44.009	Capra_hircus
ENSCSAVG00000001469	-	93	42.396	ENSTSYG00000013725	YARS2	90	42.396	Carlito_syrichta
ENSCSAVG00000001469	-	93	43.779	ENSCPOG00000015276	YARS2	93	43.779	Cavia_porcellus
ENSCSAVG00000001469	-	93	44.804	ENSCCAG00000038073	YARS2	90	44.804	Cebus_capucinus
ENSCSAVG00000001469	-	95	44.018	ENSCATG00000039275	YARS2	92	44.018	Cercocebus_atys
ENSCSAVG00000001469	-	93	43.088	ENSCLAG00000002000	YARS2	91	43.088	Chinchilla_lanigera
ENSCSAVG00000001469	-	95	43.792	ENSCSAG00000007382	YARS2	92	43.792	Chlorocebus_sabaeus
ENSCSAVG00000001469	-	93	42.759	ENSCHOG00000011749	YARS2	90	42.759	Choloepus_hoffmanni
ENSCSAVG00000001469	-	93	43.750	ENSCPBG00000020392	YARS2	90	43.750	Chrysemys_picta_bellii
ENSCSAVG00000001469	-	99	81.938	ENSCING00000007475	-	88	81.938	Ciona_intestinalis
ENSCSAVG00000001469	-	76	43.978	ENSCANG00000002599	YARS2	84	43.978	Colobus_angolensis_palliatus
ENSCSAVG00000001469	-	93	43.318	ENSCGRG00001019281	Yars2	91	43.318	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001469	-	50	34.199	ENSCGRG00000012801	-	100	34.199	Cricetulus_griseus_crigri
ENSCSAVG00000001469	-	66	44.444	ENSCSEG00000009212	yars2	98	44.444	Cynoglossus_semilaevis
ENSCSAVG00000001469	-	94	45.747	ENSCVAG00000007972	yars2	90	45.747	Cyprinodon_variegatus
ENSCSAVG00000001469	-	93	43.852	ENSDARG00000077299	yars2	91	43.649	Danio_rerio
ENSCSAVG00000001469	-	93	43.119	ENSDNOG00000024479	YARS2	92	43.119	Dasypus_novemcinctus
ENSCSAVG00000001469	-	96	43.274	FBgn0035064	TyrRS-m	96	43.274	Drosophila_melanogaster
ENSCSAVG00000001469	-	97	43.371	ENSEBUG00000006652	yars2	94	43.371	Eptatretus_burgeri
ENSCSAVG00000001469	-	93	43.779	ENSEASG00005004548	YARS2	90	43.779	Equus_asinus_asinus
ENSCSAVG00000001469	-	93	43.548	ENSECAG00000011140	YARS2	90	43.548	Equus_caballus
ENSCSAVG00000001469	-	94	46.897	ENSELUG00000007909	yars2	85	46.897	Esox_lucius
ENSCSAVG00000001469	-	93	44.342	ENSFCAG00000005329	YARS2	90	44.342	Felis_catus
ENSCSAVG00000001469	-	63	45.833	ENSFALG00000001189	YARS2	97	45.833	Ficedula_albicollis
ENSCSAVG00000001469	-	93	43.779	ENSFDAG00000006499	YARS2	92	43.779	Fukomys_damarensis
ENSCSAVG00000001469	-	94	45.057	ENSFHEG00000002505	yars2	80	45.057	Fundulus_heteroclitus
ENSCSAVG00000001469	-	94	44.598	ENSGMOG00000001082	yars2	93	44.598	Gadus_morhua
ENSCSAVG00000001469	-	93	41.898	ENSGALG00000012919	YARS2	89	41.898	Gallus_gallus
ENSCSAVG00000001469	-	94	46.207	ENSGAFG00000003993	yars2	90	46.207	Gambusia_affinis
ENSCSAVG00000001469	-	94	45.517	ENSGACG00000003720	yars2	92	45.517	Gasterosteus_aculeatus
ENSCSAVG00000001469	-	93	43.287	ENSGAGG00000007739	YARS2	90	43.287	Gopherus_agassizii
ENSCSAVG00000001469	-	83	42.415	ENSGGOG00000026482	-	89	45.985	Gorilla_gorilla
ENSCSAVG00000001469	-	94	45.057	ENSHBUG00000014602	yars2	90	45.057	Haplochromis_burtoni
ENSCSAVG00000001469	-	93	43.318	ENSHGLG00000009938	YARS2	87	43.318	Heterocephalus_glaber_female
ENSCSAVG00000001469	-	93	43.318	ENSHGLG00100001061	YARS2	91	43.318	Heterocephalus_glaber_male
ENSCSAVG00000001469	-	76	43.590	ENSHCOG00000004523	yars2	75	43.590	Hippocampus_comes
ENSCSAVG00000001469	-	94	43.418	ENSIPUG00000011637	yars2	90	43.418	Ictalurus_punctatus
ENSCSAVG00000001469	-	93	44.240	ENSSTOG00000011917	YARS2	92	44.240	Ictidomys_tridecemlineatus
ENSCSAVG00000001469	-	93	42.105	ENSJJAG00000000641	Yars2	92	42.105	Jaculus_jaculus
ENSCSAVG00000001469	-	94	45.517	ENSKMAG00000016962	yars2	91	45.517	Kryptolebias_marmoratus
ENSCSAVG00000001469	-	94	45.057	ENSLBEG00000022576	yars2	90	45.057	Labrus_bergylta
ENSCSAVG00000001469	-	93	40.920	ENSLACG00000006720	YARS2	92	40.920	Latimeria_chalumnae
ENSCSAVG00000001469	-	94	45.727	ENSLOCG00000016695	yars2	91	45.727	Lepisosteus_oculatus
ENSCSAVG00000001469	-	93	43.908	ENSLAFG00000017360	YARS2	90	43.908	Loxodonta_africana
ENSCSAVG00000001469	-	95	44.018	ENSMFAG00000032763	YARS2	92	44.018	Macaca_fascicularis
ENSCSAVG00000001469	-	95	43.792	ENSMMUG00000013654	YARS2	92	43.792	Macaca_mulatta
ENSCSAVG00000001469	-	85	41.441	ENSMNEG00000033863	YARS2	88	45.070	Macaca_nemestrina
ENSCSAVG00000001469	-	95	43.792	ENSMLEG00000040261	YARS2	92	43.792	Mandrillus_leucophaeus
ENSCSAVG00000001469	-	94	44.598	ENSMAMG00000023144	yars2	90	44.598	Mastacembelus_armatus
ENSCSAVG00000001469	-	94	45.517	ENSMZEG00005010162	yars2	90	45.517	Maylandia_zebra
ENSCSAVG00000001469	-	58	45.896	ENSMGAG00000013318	YARS2	99	45.896	Meleagris_gallopavo
ENSCSAVG00000001469	-	93	43.548	ENSMAUG00000012334	Yars2	91	43.548	Mesocricetus_auratus
ENSCSAVG00000001469	-	93	43.548	ENSMICG00000033335	YARS2	90	43.548	Microcebus_murinus
ENSCSAVG00000001469	-	93	43.318	ENSMOCG00000011433	Yars2	91	43.318	Microtus_ochrogaster
ENSCSAVG00000001469	-	80	47.205	ENSMMOG00000001063	yars2	90	47.205	Mola_mola
ENSCSAVG00000001469	-	93	44.522	ENSMODG00000012921	-	90	44.522	Monodelphis_domestica
ENSCSAVG00000001469	-	90	44.737	ENSMALG00000013849	yars2	86	44.737	Monopterus_albus
ENSCSAVG00000001469	-	93	43.779	MGP_CAROLIEiJ_G0020491	Yars2	91	43.779	Mus_caroli
ENSCSAVG00000001469	-	93	43.548	ENSMUSG00000022792	Yars2	91	43.548	Mus_musculus
ENSCSAVG00000001469	-	93	43.318	MGP_PahariEiJ_G0016196	Yars2	91	43.318	Mus_pahari
ENSCSAVG00000001469	-	93	43.779	MGP_SPRETEiJ_G0021386	Yars2	91	43.779	Mus_spretus
ENSCSAVG00000001469	-	93	44.342	ENSMPUG00000000223	YARS2	90	44.342	Mustela_putorius_furo
ENSCSAVG00000001469	-	95	42.889	ENSMLUG00000001614	YARS2	92	42.889	Myotis_lucifugus
ENSCSAVG00000001469	-	93	44.573	ENSNGAG00000021477	Yars2	91	44.573	Nannospalax_galili
ENSCSAVG00000001469	-	94	45.057	ENSNBRG00000018713	yars2	90	45.057	Neolamprologus_brichardi
ENSCSAVG00000001469	-	93	44.111	ENSNLEG00000016641	YARS2	90	44.111	Nomascus_leucogenys
ENSCSAVG00000001469	-	57	48.936	ENSMEUG00000003618	-	56	48.936	Notamacropus_eugenii
ENSCSAVG00000001469	-	93	42.396	ENSOPRG00000007817	-	90	42.396	Ochotona_princeps
ENSCSAVG00000001469	-	93	39.171	ENSODEG00000006403	YARS2	90	39.171	Octodon_degus
ENSCSAVG00000001469	-	94	45.183	ENSONIG00000008830	yars2	90	45.183	Oreochromis_niloticus
ENSCSAVG00000001469	-	95	42.342	ENSOCUG00000000022	YARS2	92	42.342	Oryctolagus_cuniculus
ENSCSAVG00000001469	-	94	45.517	ENSORLG00000002424	yars2	92	45.517	Oryzias_latipes
ENSCSAVG00000001469	-	94	45.287	ENSORLG00020019938	yars2	92	45.287	Oryzias_latipes_hni
ENSCSAVG00000001469	-	71	44.073	ENSORLG00015012856	yars2	89	44.073	Oryzias_latipes_hsok
ENSCSAVG00000001469	-	94	45.977	ENSOMEG00000007611	yars2	92	45.977	Oryzias_melastigma
ENSCSAVG00000001469	-	93	38.018	ENSOGAG00000011505	YARS2	90	38.018	Otolemur_garnettii
ENSCSAVG00000001469	-	93	43.182	ENSOARG00000019327	-	90	43.182	Ovis_aries
ENSCSAVG00000001469	-	64	31.229	ENSOARG00000008982	-	71	31.229	Ovis_aries
ENSCSAVG00000001469	-	93	44.342	ENSPPAG00000036590	YARS2	90	44.342	Pan_paniscus
ENSCSAVG00000001469	-	93	44.342	ENSPPRG00000011306	YARS2	90	44.342	Panthera_pardus
ENSCSAVG00000001469	-	93	44.342	ENSPTIG00000020214	YARS2	90	44.342	Panthera_tigris_altaica
ENSCSAVG00000001469	-	93	44.342	ENSPTRG00000004819	YARS2	90	44.342	Pan_troglodytes
ENSCSAVG00000001469	-	95	44.018	ENSPANG00000015833	YARS2	92	44.018	Papio_anubis
ENSCSAVG00000001469	-	93	43.387	ENSPKIG00000021759	yars2	89	43.387	Paramormyrops_kingsleyae
ENSCSAVG00000001469	-	99	44.858	ENSPKIG00000022142	YARS2	84	44.858	Paramormyrops_kingsleyae
ENSCSAVG00000001469	-	57	45.211	ENSPSIG00000007855	YARS2	99	45.211	Pelodiscus_sinensis
ENSCSAVG00000001469	-	94	42.494	ENSPMGG00000005934	yars2	90	42.494	Periophthalmus_magnuspinnatus
ENSCSAVG00000001469	-	98	41.667	ENSPEMG00000007655	Yars2	97	41.667	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001469	-	95	45.125	ENSPMAG00000002536	yars2	95	44.105	Petromyzon_marinus
ENSCSAVG00000001469	-	94	46.437	ENSPFOG00000012264	yars2	90	46.437	Poecilia_formosa
ENSCSAVG00000001469	-	94	46.437	ENSPLAG00000003699	yars2	90	46.437	Poecilia_latipinna
ENSCSAVG00000001469	-	94	46.437	ENSPMEG00000024102	yars2	90	46.437	Poecilia_mexicana
ENSCSAVG00000001469	-	94	46.437	ENSPREG00000011521	yars2	90	46.437	Poecilia_reticulata
ENSCSAVG00000001469	-	93	44.342	ENSPPYG00000004406	YARS2	90	44.342	Pongo_abelii
ENSCSAVG00000001469	-	70	45.098	ENSPCAG00000006086	YARS2	68	45.098	Procavia_capensis
ENSCSAVG00000001469	-	93	43.318	ENSPCOG00000026397	YARS2	90	43.318	Propithecus_coquereli
ENSCSAVG00000001469	-	95	42.664	ENSPVAG00000000520	YARS2	92	42.664	Pteropus_vampyrus
ENSCSAVG00000001469	-	94	45.287	ENSPNYG00000007346	yars2	90	45.287	Pundamilia_nyererei
ENSCSAVG00000001469	-	94	43.418	ENSPNAG00000004766	yars2	90	43.418	Pygocentrus_nattereri
ENSCSAVG00000001469	-	97	42.384	ENSRNOG00000025252	Yars2	96	42.384	Rattus_norvegicus
ENSCSAVG00000001469	-	85	40.955	ENSRBIG00000037050	-	84	40.955	Rhinopithecus_bieti
ENSCSAVG00000001469	-	85	40.955	ENSRBIG00000038155	-	84	40.955	Rhinopithecus_bieti
ENSCSAVG00000001469	-	95	43.792	ENSRBIG00000041046	-	92	43.792	Rhinopithecus_bieti
ENSCSAVG00000001469	-	80	43.351	ENSRROG00000030036	-	82	43.351	Rhinopithecus_roxellana
ENSCSAVG00000001469	-	95	43.792	ENSRROG00000037913	-	92	43.792	Rhinopithecus_roxellana
ENSCSAVG00000001469	-	77	35.342	YPL097W	-	74	35.342	Saccharomyces_cerevisiae
ENSCSAVG00000001469	-	93	44.804	ENSSBOG00000023473	YARS2	90	44.804	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001469	-	95	43.468	ENSSHAG00000004495	YARS2	92	43.468	Sarcophilus_harrisii
ENSCSAVG00000001469	-	97	43.624	ENSSFOG00015002490	yars2	91	43.624	Scleropages_formosus
ENSCSAVG00000001469	-	93	44.213	ENSSMAG00000006844	yars2	87	44.213	Scophthalmus_maximus
ENSCSAVG00000001469	-	94	45.517	ENSSDUG00000023361	yars2	90	45.517	Seriola_dumerili
ENSCSAVG00000001469	-	94	45.517	ENSSLDG00000023865	yars2	90	45.517	Seriola_lalandi_dorsalis
ENSCSAVG00000001469	-	93	42.759	ENSSPUG00000000061	YARS2	86	42.759	Sphenodon_punctatus
ENSCSAVG00000001469	-	94	45.057	ENSSPAG00000020638	yars2	90	45.057	Stegastes_partitus
ENSCSAVG00000001469	-	93	44.009	ENSSSCG00000027429	-	90	44.009	Sus_scrofa
ENSCSAVG00000001469	-	66	43.934	ENSTGUG00000011510	YARS2	94	43.934	Taeniopygia_guttata
ENSCSAVG00000001469	-	93	45.116	ENSTRUG00000016475	yars2	94	43.267	Takifugu_rubripes
ENSCSAVG00000001469	-	94	43.218	ENSTNIG00000006253	yars2	90	43.218	Tetraodon_nigroviridis
ENSCSAVG00000001469	-	63	44.863	ENSTBEG00000008274	YARS2	61	44.863	Tupaia_belangeri
ENSCSAVG00000001469	-	93	44.240	ENSTTRG00000013823	YARS2	90	44.240	Tursiops_truncatus
ENSCSAVG00000001469	-	93	44.342	ENSUAMG00000014358	YARS2	90	44.342	Ursus_americanus
ENSCSAVG00000001469	-	93	44.342	ENSUMAG00000003011	YARS2	90	44.342	Ursus_maritimus
ENSCSAVG00000001469	-	97	41.469	ENSVPAG00000004767	YARS2	96	41.469	Vicugna_pacos
ENSCSAVG00000001469	-	93	45.266	ENSVVUG00000012736	YARS2	90	45.266	Vulpes_vulpes
ENSCSAVG00000001469	-	58	42.953	ENSXETG00000012271	yars2	71	42.953	Xenopus_tropicalis
ENSCSAVG00000001469	-	94	45.287	ENSXCOG00000020889	yars2	90	45.287	Xiphophorus_couchianus
ENSCSAVG00000001469	-	94	45.517	ENSXMAG00000009650	yars2	90	45.517	Xiphophorus_maculatus