EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001505 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 795 bases
Position: chrreftig_442:15074-15868
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002552	MRP-L28	PF09812.9	1.7e-25	1	1
ENSCSAVP00000002553	MRP-L28	PF09812.9	8.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002593	-	696	-	ENSCSAVP00000002552	202 (aa)	-	H2YB54
ENSCSAVT00000002594	-	597	-	ENSCSAVP00000002553	169 (aa)	-	H2YB55

Gene Model

Click here to download ENSCSAVG00000001505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001505	-	63	36.220	ENSG00000185608	MRPL40	62	36.220	Homo_sapiens
ENSCSAVG00000001505	-	63	38.583	ENSAPOG00000021291	mrpl40	63	38.583	Acanthochromis_polyacanthus
ENSCSAVG00000001505	-	63	36.220	ENSAMEG00000011421	MRPL40	62	36.220	Ailuropoda_melanoleuca
ENSCSAVG00000001505	-	52	39.773	ENSACIG00000006717	MRPL40	83	32.716	Amphilophus_citrinellus
ENSCSAVG00000001505	-	54	41.818	ENSACIG00000006672	mrpl40	63	40.945	Amphilophus_citrinellus
ENSCSAVG00000001505	-	54	40.909	ENSAOCG00000003216	mrpl40	63	40.945	Amphiprion_ocellaris
ENSCSAVG00000001505	-	54	40.909	ENSAPEG00000017401	mrpl40	63	40.945	Amphiprion_percula
ENSCSAVG00000001505	-	54	39.091	ENSATEG00000020753	mrpl40	75	38.583	Anabas_testudineus
ENSCSAVG00000001505	-	57	40.000	ENSAPLG00000004002	MRPL40	65	40.000	Anas_platyrhynchos
ENSCSAVG00000001505	-	52	41.304	ENSACAG00000001053	MRPL40	63	39.200	Anolis_carolinensis
ENSCSAVG00000001505	-	63	35.433	ENSANAG00000026579	MRPL40	62	35.433	Aotus_nancymaae
ENSCSAVG00000001505	-	54	40.909	ENSACLG00000011106	mrpl40	63	40.157	Astatotilapia_calliptera
ENSCSAVG00000001505	-	54	45.455	ENSAMXG00000029691	mrpl40	63	44.094	Astyanax_mexicanus
ENSCSAVG00000001505	-	63	36.220	ENSBTAG00000019891	MRPL40	62	36.220	Bos_taurus
ENSCSAVG00000001505	-	63	33.588	WBGene00018793	mrpl-40	69	33.588	Caenorhabditis_elegans
ENSCSAVG00000001505	-	63	35.433	ENSCJAG00000001584	MRPL40	61	35.433	Callithrix_jacchus
ENSCSAVG00000001505	-	63	37.008	ENSCAFG00020007995	MRPL40	62	37.008	Canis_lupus_dingo
ENSCSAVG00000001505	-	63	36.220	ENSCHIG00000000131	-	64	36.220	Capra_hircus
ENSCSAVG00000001505	-	63	37.008	ENSTSYG00000014747	MRPL40	63	37.008	Carlito_syrichta
ENSCSAVG00000001505	-	63	39.535	ENSCAPG00000012876	MRPL40	89	39.535	Cavia_aperea
ENSCSAVG00000001505	-	63	39.535	ENSCPOG00000026802	MRPL40	62	39.535	Cavia_porcellus
ENSCSAVG00000001505	-	63	36.220	ENSCCAG00000037694	MRPL40	64	36.220	Cebus_capucinus
ENSCSAVG00000001505	-	63	37.008	ENSCATG00000043592	-	63	37.008	Cercocebus_atys
ENSCSAVG00000001505	-	63	37.008	ENSCATG00000031418	-	62	37.008	Cercocebus_atys
ENSCSAVG00000001505	-	63	39.535	ENSCLAG00000016629	MRPL40	62	39.535	Chinchilla_lanigera
ENSCSAVG00000001505	-	63	37.008	ENSCSAG00000011593	MRPL40	62	37.008	Chlorocebus_sabaeus
ENSCSAVG00000001505	-	63	37.500	ENSCHOG00000008751	MRPL40	70	37.008	Choloepus_hoffmanni
ENSCSAVG00000001505	-	61	41.121	ENSCPBG00000010618	MRPL40	67	39.062	Chrysemys_picta_bellii
ENSCSAVG00000001505	-	63	37.008	ENSCANG00000038600	MRPL40	68	37.008	Colobus_angolensis_palliatus
ENSCSAVG00000001505	-	63	37.008	ENSCGRG00001019957	Mrpl40	62	37.008	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001505	-	63	37.008	ENSCGRG00000001245	Mrpl40	62	37.008	Cricetulus_griseus_crigri
ENSCSAVG00000001505	-	54	43.636	ENSCSEG00000019750	mrpl40	62	43.307	Cynoglossus_semilaevis
ENSCSAVG00000001505	-	54	40.909	ENSCVAG00000018229	mrpl40	63	40.945	Cyprinodon_variegatus
ENSCSAVG00000001505	-	63	40.945	ENSDARG00000043554	mrpl40	64	40.945	Danio_rerio
ENSCSAVG00000001505	-	60	34.426	ENSDNOG00000038360	-	64	34.586	Dasypus_novemcinctus
ENSCSAVG00000001505	-	63	37.008	ENSDORG00000002949	Mrpl40	62	37.008	Dipodomys_ordii
ENSCSAVG00000001505	-	67	37.226	FBgn0037892	mRpL40	68	37.226	Drosophila_melanogaster
ENSCSAVG00000001505	-	63	37.795	ENSEASG00005010493	MRPL40	62	37.795	Equus_asinus_asinus
ENSCSAVG00000001505	-	63	37.795	ENSECAG00000009876	MRPL40	76	37.795	Equus_caballus
ENSCSAVG00000001505	-	63	35.433	ENSEEUG00000009268	MRPL40	61	35.433	Erinaceus_europaeus
ENSCSAVG00000001505	-	54	43.636	ENSELUG00000009281	mrpl40	63	42.520	Esox_lucius
ENSCSAVG00000001505	-	63	37.984	ENSFCAG00000002752	MRPL40	62	37.984	Felis_catus
ENSCSAVG00000001505	-	57	40.870	ENSFALG00000007981	MRPL40	66	40.769	Ficedula_albicollis
ENSCSAVG00000001505	-	63	37.008	ENSFDAG00000020940	MRPL40	78	37.008	Fukomys_damarensis
ENSCSAVG00000001505	-	54	42.857	ENSGAFG00000000522	mrpl40	63	40.945	Gambusia_affinis
ENSCSAVG00000001505	-	57	40.000	ENSGAGG00000020728	MRPL40	63	40.000	Gopherus_agassizii
ENSCSAVG00000001505	-	63	37.008	ENSGGOG00000012336	MRPL40	62	37.008	Gorilla_gorilla
ENSCSAVG00000001505	-	54	40.909	ENSHBUG00000000404	mrpl40	63	40.157	Haplochromis_burtoni
ENSCSAVG00000001505	-	63	37.008	ENSHGLG00000018525	MRPL40	78	37.008	Heterocephalus_glaber_female
ENSCSAVG00000001505	-	63	37.008	ENSHGLG00100009563	MRPL40	62	37.008	Heterocephalus_glaber_male
ENSCSAVG00000001505	-	54	40.000	ENSHCOG00000005731	mrpl40	63	40.157	Hippocampus_comes
ENSCSAVG00000001505	-	54	40.000	ENSIPUG00000020288	Mrpl40	60	39.370	Ictalurus_punctatus
ENSCSAVG00000001505	-	63	39.535	ENSSTOG00000002887	MRPL40	62	39.535	Ictidomys_tridecemlineatus
ENSCSAVG00000001505	-	63	37.008	ENSJJAG00000017905	Mrpl40	62	37.008	Jaculus_jaculus
ENSCSAVG00000001505	-	54	38.182	ENSKMAG00000003717	mrpl40	63	37.008	Kryptolebias_marmoratus
ENSCSAVG00000001505	-	54	40.000	ENSLBEG00000025203	mrpl40	69	39.370	Labrus_bergylta
ENSCSAVG00000001505	-	54	40.909	ENSLACG00000015070	MRPL40	63	40.945	Latimeria_chalumnae
ENSCSAVG00000001505	-	54	43.636	ENSLOCG00000001879	mrpl40	63	41.732	Lepisosteus_oculatus
ENSCSAVG00000001505	-	63	37.008	ENSLAFG00000011061	MRPL40	62	37.008	Loxodonta_africana
ENSCSAVG00000001505	-	63	36.220	ENSMFAG00000039890	-	68	36.220	Macaca_fascicularis
ENSCSAVG00000001505	-	63	35.433	ENSMFAG00000001495	-	63	35.433	Macaca_fascicularis
ENSCSAVG00000001505	-	63	37.008	ENSMFAG00000032018	-	62	37.008	Macaca_fascicularis
ENSCSAVG00000001505	-	63	35.433	ENSMMUG00000006218	-	71	35.433	Macaca_mulatta
ENSCSAVG00000001505	-	63	37.984	ENSMMUG00000030886	-	62	37.984	Macaca_mulatta
ENSCSAVG00000001505	-	63	36.220	ENSMNEG00000040492	-	69	36.220	Macaca_nemestrina
ENSCSAVG00000001505	-	63	37.008	ENSMNEG00000034050	-	62	37.008	Macaca_nemestrina
ENSCSAVG00000001505	-	63	37.008	ENSMNEG00000041171	-	64	37.008	Macaca_nemestrina
ENSCSAVG00000001505	-	63	34.646	ENSMLEG00000009022	-	68	34.646	Mandrillus_leucophaeus
ENSCSAVG00000001505	-	63	37.008	ENSMLEG00000030926	-	68	37.008	Mandrillus_leucophaeus
ENSCSAVG00000001505	-	63	37.008	ENSMLEG00000032552	-	63	37.008	Mandrillus_leucophaeus
ENSCSAVG00000001505	-	54	40.909	ENSMAMG00000014249	mrpl40	63	40.157	Mastacembelus_armatus
ENSCSAVG00000001505	-	54	40.909	ENSMZEG00005009853	mrpl40	63	40.157	Maylandia_zebra
ENSCSAVG00000001505	-	57	40.000	ENSMGAG00000001177	MRPL40	84	40.000	Meleagris_gallopavo
ENSCSAVG00000001505	-	63	37.984	ENSMAUG00000015350	Mrpl40	62	37.984	Mesocricetus_auratus
ENSCSAVG00000001505	-	63	35.433	ENSMICG00000046066	MRPL40	62	35.433	Microcebus_murinus
ENSCSAVG00000001505	-	63	34.646	ENSMOCG00000016970	Mrpl40	62	34.646	Microtus_ochrogaster
ENSCSAVG00000001505	-	54	41.818	ENSMMOG00000012861	mrpl40	69	40.945	Mola_mola
ENSCSAVG00000001505	-	54	36.364	ENSMODG00000010070	MRPL40	70	36.220	Monodelphis_domestica
ENSCSAVG00000001505	-	54	40.000	ENSMALG00000020778	mrpl40	69	38.060	Monopterus_albus
ENSCSAVG00000001505	-	63	36.220	MGP_CAROLIEiJ_G0020557	Mrpl40	78	36.220	Mus_caroli
ENSCSAVG00000001505	-	63	36.220	ENSMUSG00000022706	Mrpl40	78	36.220	Mus_musculus
ENSCSAVG00000001505	-	63	35.433	MGP_PahariEiJ_G0016262	Mrpl40	78	35.433	Mus_pahari
ENSCSAVG00000001505	-	63	36.220	MGP_SPRETEiJ_G0021452	Mrpl40	78	36.220	Mus_spretus
ENSCSAVG00000001505	-	63	37.008	ENSMPUG00000003865	MRPL40	62	37.008	Mustela_putorius_furo
ENSCSAVG00000001505	-	63	38.583	ENSMLUG00000024620	-	62	38.583	Myotis_lucifugus
ENSCSAVG00000001505	-	63	38.583	ENSMLUG00000002456	-	62	38.583	Myotis_lucifugus
ENSCSAVG00000001505	-	63	35.433	ENSNGAG00000000304	Mrpl40	63	35.433	Nannospalax_galili
ENSCSAVG00000001505	-	63	37.008	ENSNLEG00000005372	MRPL40	62	37.008	Nomascus_leucogenys
ENSCSAVG00000001505	-	63	38.760	ENSODEG00000017051	MRPL40	62	38.760	Octodon_degus
ENSCSAVG00000001505	-	54	40.909	ENSONIG00000014393	mrpl40	63	40.157	Oreochromis_niloticus
ENSCSAVG00000001505	-	54	40.000	ENSORLG00000002574	mrpl40	83	36.364	Oryzias_latipes
ENSCSAVG00000001505	-	54	40.000	ENSORLG00020005727	mrpl40	63	38.583	Oryzias_latipes_hni
ENSCSAVG00000001505	-	54	38.182	ENSORLG00015015422	mrpl40	63	37.008	Oryzias_latipes_hsok
ENSCSAVG00000001505	-	54	41.818	ENSOMEG00000017632	mrpl40	63	40.945	Oryzias_melastigma
ENSCSAVG00000001505	-	63	35.433	ENSOGAG00000030071	MRPL40	68	35.433	Otolemur_garnettii
ENSCSAVG00000001505	-	63	36.220	ENSOARG00000017561	MRPL40	60	36.220	Ovis_aries
ENSCSAVG00000001505	-	63	37.795	ENSPPAG00000030349	MRPL40	62	37.795	Pan_paniscus
ENSCSAVG00000001505	-	63	37.209	ENSPPRG00000004672	MRPL40	62	37.209	Panthera_pardus
ENSCSAVG00000001505	-	63	37.209	ENSPTIG00000003393	MRPL40	62	37.209	Panthera_tigris_altaica
ENSCSAVG00000001505	-	63	37.795	ENSPTRG00000014061	MRPL40	62	37.795	Pan_troglodytes
ENSCSAVG00000001505	-	63	37.008	ENSPANG00000007370	-	62	37.008	Papio_anubis
ENSCSAVG00000001505	-	63	37.008	ENSPANG00000000595	-	63	37.008	Papio_anubis
ENSCSAVG00000001505	-	63	42.520	ENSPKIG00000024494	mrpl40	62	42.520	Paramormyrops_kingsleyae
ENSCSAVG00000001505	-	56	38.938	ENSPSIG00000003055	MRPL40	79	38.462	Pelodiscus_sinensis
ENSCSAVG00000001505	-	54	42.727	ENSPMGG00000018388	mrpl40	68	41.732	Periophthalmus_magnuspinnatus
ENSCSAVG00000001505	-	63	35.433	ENSPEMG00000017933	Mrpl40	62	35.433	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001505	-	63	39.535	ENSPCIG00000025479	MRPL40	62	39.535	Phascolarctos_cinereus
ENSCSAVG00000001505	-	54	40.708	ENSPFOG00000012506	mrpl40	61	40.769	Poecilia_formosa
ENSCSAVG00000001505	-	54	40.909	ENSPLAG00000017335	mrpl40	63	40.945	Poecilia_latipinna
ENSCSAVG00000001505	-	54	40.909	ENSPMEG00000003881	mrpl40	63	40.945	Poecilia_mexicana
ENSCSAVG00000001505	-	54	42.857	ENSPREG00000011448	mrpl40	63	42.636	Poecilia_reticulata
ENSCSAVG00000001505	-	63	38.583	ENSPPYG00000011578	MRPL40	68	38.583	Pongo_abelii
ENSCSAVG00000001505	-	60	36.364	ENSPCAG00000007834	MRPL40	59	36.364	Procavia_capensis
ENSCSAVG00000001505	-	63	35.433	ENSPCOG00000014413	MRPL40	62	35.433	Propithecus_coquereli
ENSCSAVG00000001505	-	54	40.909	ENSPNYG00000008216	mrpl40	63	40.157	Pundamilia_nyererei
ENSCSAVG00000001505	-	86	30.994	ENSPNAG00000000310	mrpl40	95	32.804	Pygocentrus_nattereri
ENSCSAVG00000001505	-	63	36.434	ENSRNOG00000049686	Mrpl40	62	36.434	Rattus_norvegicus
ENSCSAVG00000001505	-	63	37.008	ENSRBIG00000023060	MRPL40	62	37.008	Rhinopithecus_bieti
ENSCSAVG00000001505	-	63	36.220	ENSRROG00000043837	MRPL40	62	36.220	Rhinopithecus_roxellana
ENSCSAVG00000001505	-	63	35.433	ENSSBOG00000031050	MRPL40	62	35.433	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001505	-	63	35.433	ENSSHAG00000010239	MRPL40	79	35.433	Sarcophilus_harrisii
ENSCSAVG00000001505	-	62	44.037	ENSSFOG00015014220	mrpl40	65	42.520	Scleropages_formosus
ENSCSAVG00000001505	-	54	39.091	ENSSMAG00000006340	mrpl40	62	39.370	Scophthalmus_maximus
ENSCSAVG00000001505	-	63	38.583	ENSSDUG00000022994	mrpl40	62	38.583	Seriola_dumerili
ENSCSAVG00000001505	-	63	38.583	ENSSLDG00000009671	mrpl40	62	38.583	Seriola_lalandi_dorsalis
ENSCSAVG00000001505	-	63	37.795	ENSSARG00000003051	MRPL40	62	37.795	Sorex_araneus
ENSCSAVG00000001505	-	62	38.400	ENSSPUG00000015559	MRPL40	63	38.400	Sphenodon_punctatus
ENSCSAVG00000001505	-	54	40.909	ENSSPAG00000015481	mrpl40	64	38.760	Stegastes_partitus
ENSCSAVG00000001505	-	63	37.008	ENSSSCG00000034014	MRPL40	62	37.008	Sus_scrofa
ENSCSAVG00000001505	-	57	39.130	ENSTGUG00000008534	MRPL40	84	39.231	Taeniopygia_guttata
ENSCSAVG00000001505	-	56	42.105	ENSTRUG00000025904	mrpl40	63	40.945	Takifugu_rubripes
ENSCSAVG00000001505	-	63	34.646	ENSTTRG00000014932	MRPL40	63	34.646	Tursiops_truncatus
ENSCSAVG00000001505	-	63	36.220	ENSUAMG00000007667	MRPL40	62	36.220	Ursus_americanus
ENSCSAVG00000001505	-	63	35.433	ENSUMAG00000006804	MRPL40	63	35.433	Ursus_maritimus
ENSCSAVG00000001505	-	63	40.310	ENSVVUG00000025360	-	62	40.310	Vulpes_vulpes
ENSCSAVG00000001505	-	63	37.008	ENSXETG00000018600	mrpl40	64	37.008	Xenopus_tropicalis
ENSCSAVG00000001505	-	54	42.857	ENSXCOG00000002135	mrpl40	63	40.945	Xiphophorus_couchianus
ENSCSAVG00000001505	-	54	42.857	ENSXMAG00000014595	mrpl40	63	40.945	Xiphophorus_maculatus