EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001561 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8860 bases
Position: chrreftig_12:415082-423941
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002639	Nop14	PF04147.12	2.7e-218	1	1
ENSCSAVP00000002640	Nop14	PF04147.12	3.7e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002680	-	2624	-	ENSCSAVP00000002639	861 (aa)	-	H2YBE1
ENSCSAVT00000002681	-	1244	-	ENSCSAVP00000002640	373 (aa)	-	H2YBE2

Gene Model

Click here to download ENSCSAVG00000001561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001561	-	91	43.923	ENSG00000087269	NOP14	99	36.199	Homo_sapiens
ENSCSAVG00000001561	-	79	46.512	ENSAPOG00000019863	nop14	99	35.730	Acanthochromis_polyacanthus
ENSCSAVG00000001561	-	97	41.489	ENSAMEG00000014547	NOP14	99	33.865	Ailuropoda_melanoleuca
ENSCSAVG00000001561	-	79	46.689	ENSACIG00000017590	nop14	99	36.508	Amphilophus_citrinellus
ENSCSAVG00000001561	-	79	46.179	ENSAOCG00000021764	-	99	37.520	Amphiprion_ocellaris
ENSCSAVG00000001561	-	79	45.847	ENSAOCG00000004441	nop14	99	36.302	Amphiprion_ocellaris
ENSCSAVG00000001561	-	79	46.179	ENSAPEG00000016589	nop14	99	36.149	Amphiprion_percula
ENSCSAVG00000001561	-	79	46.053	ENSATEG00000016930	nop14	99	36.194	Anabas_testudineus
ENSCSAVG00000001561	-	97	35.615	ENSAPLG00000006726	NOP14	97	35.328	Anas_platyrhynchos
ENSCSAVG00000001561	-	97	34.479	ENSACAG00000005288	NOP14	98	34.539	Anolis_carolinensis
ENSCSAVG00000001561	-	96	35.409	ENSANAG00000022601	NOP14	99	35.491	Aotus_nancymaae
ENSCSAVG00000001561	-	79	44.482	ENSACLG00000006996	nop14	99	34.889	Astatotilapia_calliptera
ENSCSAVG00000001561	-	79	45.270	ENSAMXG00000007533	nop14	99	35.154	Astyanax_mexicanus
ENSCSAVG00000001561	-	97	33.333	ENSBTAG00000001504	NOP14	99	33.738	Bos_taurus
ENSCSAVG00000001561	-	96	34.186	ENSCJAG00000014174	NOP14	99	34.257	Callithrix_jacchus
ENSCSAVG00000001561	-	95	41.316	ENSCAFG00000014730	NOP14	97	35.194	Canis_familiaris
ENSCSAVG00000001561	-	95	41.316	ENSCAFG00020012768	NOP14	97	35.194	Canis_lupus_dingo
ENSCSAVG00000001561	-	99	33.595	ENSCHIG00000026702	NOP14	99	33.703	Capra_hircus
ENSCSAVG00000001561	-	96	34.286	ENSTSYG00000007417	NOP14	98	35.381	Carlito_syrichta
ENSCSAVG00000001561	-	91	34.325	ENSCAPG00000008504	NOP14	99	34.719	Cavia_aperea
ENSCSAVG00000001561	-	95	35.469	ENSCPOG00000012869	NOP14	97	35.789	Cavia_porcellus
ENSCSAVG00000001561	-	96	43.094	ENSCCAG00000034221	NOP14	99	34.922	Cebus_capucinus
ENSCSAVG00000001561	-	97	42.779	ENSCATG00000032427	NOP14	99	34.375	Cercocebus_atys
ENSCSAVG00000001561	-	97	34.988	ENSCLAG00000008622	NOP14	98	36.289	Chinchilla_lanigera
ENSCSAVG00000001561	-	99	34.308	ENSCSAG00000015804	NOP14	99	34.375	Chlorocebus_sabaeus
ENSCSAVG00000001561	-	79	47.333	ENSCPBG00000013842	NOP14	98	36.028	Chrysemys_picta_bellii
ENSCSAVG00000001561	-	99	71.322	ENSCING00000020812	-	99	70.481	Ciona_intestinalis
ENSCSAVG00000001561	-	84	40.252	ENSCANG00000006450	NOP14	99	33.574	Colobus_angolensis_palliatus
ENSCSAVG00000001561	-	98	34.960	ENSCGRG00001009013	Nop14	93	36.014	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001561	-	99	35.034	ENSCGRG00000002554	Nop14	98	36.249	Cricetulus_griseus_crigri
ENSCSAVG00000001561	-	79	47.333	ENSCSEG00000019893	nop14	99	36.031	Cynoglossus_semilaevis
ENSCSAVG00000001561	-	79	46.358	ENSCVAG00000019406	nop14	99	33.595	Cyprinodon_variegatus
ENSCSAVG00000001561	-	92	39.286	ENSDNOG00000030915	-	75	34.062	Dasypus_novemcinctus
ENSCSAVG00000001561	-	93	39.024	ENSDNOG00000040831	-	97	33.998	Dasypus_novemcinctus
ENSCSAVG00000001561	-	92	33.898	ENSDORG00000001193	Nop14	99	34.741	Dipodomys_ordii
ENSCSAVG00000001561	-	61	47.701	ENSETEG00000017396	NOP14	62	47.399	Echinops_telfairi
ENSCSAVG00000001561	-	80	33.003	ENSEBUG00000004689	NOP14	77	32.615	Eptatretus_burgeri
ENSCSAVG00000001561	-	84	45.918	ENSEASG00005001906	NOP14	97	33.988	Equus_asinus_asinus
ENSCSAVG00000001561	-	96	34.313	ENSECAG00000023951	NOP14	97	34.262	Equus_caballus
ENSCSAVG00000001561	-	79	45.000	ENSELUG00000008107	nop14	99	35.395	Esox_lucius
ENSCSAVG00000001561	-	96	34.954	ENSFCAG00000004601	NOP14	98	34.778	Felis_catus
ENSCSAVG00000001561	-	79	48.000	ENSFALG00000009800	NOP14	97	35.624	Ficedula_albicollis
ENSCSAVG00000001561	-	91	45.588	ENSFDAG00000017779	NOP14	98	35.930	Fukomys_damarensis
ENSCSAVG00000001561	-	79	44.702	ENSFHEG00000004060	nop14	99	34.498	Fundulus_heteroclitus
ENSCSAVG00000001561	-	76	48.927	ENSGMOG00000003607	NOP14	95	48.927	Gadus_morhua
ENSCSAVG00000001561	-	79	48.344	ENSGALG00000015649	NOP14	97	36.909	Gallus_gallus
ENSCSAVG00000001561	-	79	44.702	ENSGAFG00000011768	nop14	99	33.834	Gambusia_affinis
ENSCSAVG00000001561	-	78	48.291	ENSGACG00000016531	nop14	93	48.291	Gasterosteus_aculeatus
ENSCSAVG00000001561	-	97	34.655	ENSGAGG00000025266	NOP14	97	35.968	Gopherus_agassizii
ENSCSAVG00000001561	-	99	34.650	ENSGGOG00000011213	NOP14	99	35.039	Gorilla_gorilla
ENSCSAVG00000001561	-	79	44.482	ENSHBUG00000018508	nop14	99	34.910	Haplochromis_burtoni
ENSCSAVG00000001561	-	95	32.859	ENSHGLG00000004991	NOP14	97	32.905	Heterocephalus_glaber_female
ENSCSAVG00000001561	-	95	35.077	ENSHGLG00100012672	NOP14	97	32.905	Heterocephalus_glaber_male
ENSCSAVG00000001561	-	79	45.847	ENSHCOG00000011995	nop14	99	33.514	Hippocampus_comes
ENSCSAVG00000001561	-	79	45.608	ENSIPUG00000002699	nop14	99	33.296	Ictalurus_punctatus
ENSCSAVG00000001561	-	96	35.088	ENSSTOG00000009739	NOP14	97	35.502	Ictidomys_tridecemlineatus
ENSCSAVG00000001561	-	97	35.301	ENSJJAG00000006861	Nop14	97	34.842	Jaculus_jaculus
ENSCSAVG00000001561	-	79	46.179	ENSKMAG00000015165	nop14	99	35.367	Kryptolebias_marmoratus
ENSCSAVG00000001561	-	79	44.333	ENSLBEG00000018666	nop14	99	33.295	Labrus_bergylta
ENSCSAVG00000001561	-	98	34.231	ENSLACG00000011939	NOP14	99	34.714	Latimeria_chalumnae
ENSCSAVG00000001561	-	99	35.923	ENSLOCG00000011611	nop14	99	36.506	Lepisosteus_oculatus
ENSCSAVG00000001561	-	95	35.077	ENSLAFG00000017989	NOP14	96	35.647	Loxodonta_africana
ENSCSAVG00000001561	-	97	42.779	ENSMFAG00000004046	NOP14	99	34.263	Macaca_fascicularis
ENSCSAVG00000001561	-	97	42.507	ENSMMUG00000008385	NOP14	99	33.929	Macaca_mulatta
ENSCSAVG00000001561	-	97	42.779	ENSMNEG00000039699	NOP14	99	34.152	Macaca_nemestrina
ENSCSAVG00000001561	-	97	38.315	ENSMLEG00000037295	NOP14	99	32.478	Mandrillus_leucophaeus
ENSCSAVG00000001561	-	79	47.508	ENSMAMG00000014358	nop14	99	36.230	Mastacembelus_armatus
ENSCSAVG00000001561	-	99	34.099	ENSMZEG00005019659	nop14	99	34.822	Maylandia_zebra
ENSCSAVG00000001561	-	79	48.013	ENSMGAG00000012970	NOP14	97	36.721	Meleagris_gallopavo
ENSCSAVG00000001561	-	70	32.258	ENSMAUG00000011891	Nop14	99	32.137	Mesocricetus_auratus
ENSCSAVG00000001561	-	90	44.118	ENSMICG00000007804	NOP14	97	35.260	Microcebus_murinus
ENSCSAVG00000001561	-	99	35.341	ENSMOCG00000021638	Nop14	99	35.690	Microtus_ochrogaster
ENSCSAVG00000001561	-	79	44.040	ENSMMOG00000000248	nop14	99	34.768	Mola_mola
ENSCSAVG00000001561	-	94	44.110	ENSMODG00000003736	NOP14	99	36.124	Monodelphis_domestica
ENSCSAVG00000001561	-	99	33.296	ENSMALG00000020699	nop14	99	34.086	Monopterus_albus
ENSCSAVG00000001561	-	96	35.623	MGP_CAROLIEiJ_G0027137	Nop14	97	36.133	Mus_caroli
ENSCSAVG00000001561	-	90	43.195	ENSMUSG00000036693	Nop14	97	35.903	Mus_musculus
ENSCSAVG00000001561	-	90	43.195	MGP_PahariEiJ_G0016921	Nop14	98	35.226	Mus_pahari
ENSCSAVG00000001561	-	90	43.195	MGP_SPRETEiJ_G0028133	Nop14	97	35.673	Mus_spretus
ENSCSAVG00000001561	-	95	41.176	ENSMPUG00000010899	NOP14	97	32.993	Mustela_putorius_furo
ENSCSAVG00000001561	-	78	46.441	ENSMLUG00000010861	NOP14	97	34.758	Myotis_lucifugus
ENSCSAVG00000001561	-	96	35.053	ENSNGAG00000023183	Nop14	97	35.889	Nannospalax_galili
ENSCSAVG00000001561	-	99	33.636	ENSNBRG00000008215	nop14	99	34.364	Neolamprologus_brichardi
ENSCSAVG00000001561	-	92	34.258	ENSNLEG00000000239	NOP14	99	34.211	Nomascus_leucogenys
ENSCSAVG00000001561	-	78	38.983	ENSMEUG00000016104	NOP14	75	34.331	Notamacropus_eugenii
ENSCSAVG00000001561	-	69	34.866	ENSOPRG00000009253	-	54	35.019	Ochotona_princeps
ENSCSAVG00000001561	-	97	33.839	ENSODEG00000011223	NOP14	99	33.910	Octodon_degus
ENSCSAVG00000001561	-	79	45.333	ENSONIG00000014954	nop14	99	33.739	Oreochromis_niloticus
ENSCSAVG00000001561	-	62	41.176	ENSOANG00000005809	-	98	42.437	Ornithorhynchus_anatinus
ENSCSAVG00000001561	-	90	34.491	ENSOCUG00000004725	NOP14	100	34.152	Oryctolagus_cuniculus
ENSCSAVG00000001561	-	94	41.209	ENSORLG00000005674	nop14	99	34.302	Oryzias_latipes
ENSCSAVG00000001561	-	79	45.875	ENSORLG00020005701	nop14	99	34.733	Oryzias_latipes_hni
ENSCSAVG00000001561	-	79	45.875	ENSORLG00015012355	nop14	99	33.958	Oryzias_latipes_hsok
ENSCSAVG00000001561	-	79	46.535	ENSOMEG00000008357	nop14	99	34.525	Oryzias_melastigma
ENSCSAVG00000001561	-	98	33.596	ENSOGAG00000011073	NOP14	99	34.040	Otolemur_garnettii
ENSCSAVG00000001561	-	91	33.128	ENSOARG00000014516	NOP14	99	33.373	Ovis_aries
ENSCSAVG00000001561	-	89	45.058	ENSPPAG00000037688	NOP14	99	35.373	Pan_paniscus
ENSCSAVG00000001561	-	96	34.829	ENSPPRG00000012848	NOP14	98	34.732	Panthera_pardus
ENSCSAVG00000001561	-	67	44.314	ENSPTIG00000007085	NOP14	80	36.694	Panthera_tigris_altaica
ENSCSAVG00000001561	-	99	33.070	ENSPTRG00000015852	NOP14	99	33.147	Pan_troglodytes
ENSCSAVG00000001561	-	97	42.507	ENSPANG00000009642	NOP14	99	34.263	Papio_anubis
ENSCSAVG00000001561	-	79	44.702	ENSPKIG00000009879	nop14	99	34.000	Paramormyrops_kingsleyae
ENSCSAVG00000001561	-	70	31.024	ENSPSIG00000008187	NOP14	99	31.132	Pelodiscus_sinensis
ENSCSAVG00000001561	-	79	43.377	ENSPMGG00000022904	nop14	99	32.997	Periophthalmus_magnuspinnatus
ENSCSAVG00000001561	-	99	34.932	ENSPEMG00000005399	Nop14	98	35.829	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001561	-	98	36.269	ENSPMAG00000003297	nop14	99	30.359	Petromyzon_marinus
ENSCSAVG00000001561	-	97	42.627	ENSPCIG00000028518	NOP14	97	35.948	Phascolarctos_cinereus
ENSCSAVG00000001561	-	79	45.695	ENSPFOG00000009859	nop14	99	34.783	Poecilia_formosa
ENSCSAVG00000001561	-	79	45.695	ENSPLAG00000010999	nop14	99	34.797	Poecilia_latipinna
ENSCSAVG00000001561	-	79	44.702	ENSPMEG00000008718	nop14	99	34.050	Poecilia_mexicana
ENSCSAVG00000001561	-	79	45.033	ENSPREG00000016921	nop14	99	34.876	Poecilia_reticulata
ENSCSAVG00000001561	-	89	44.767	ENSPPYG00000014549	NOP14	99	34.714	Pongo_abelii
ENSCSAVG00000001561	-	90	45.402	ENSPCOG00000027916	NOP14	97	36.143	Propithecus_coquereli
ENSCSAVG00000001561	-	98	33.642	ENSPVAG00000011306	NOP14	99	33.642	Pteropus_vampyrus
ENSCSAVG00000001561	-	79	44.482	ENSPNYG00000008246	nop14	99	35.513	Pundamilia_nyererei
ENSCSAVG00000001561	-	80	43.934	ENSPNAG00000025999	nop14	99	33.632	Pygocentrus_nattereri
ENSCSAVG00000001561	-	96	34.895	ENSRNOG00000012147	Nop14	96	38.942	Rattus_norvegicus
ENSCSAVG00000001561	-	99	34.633	ENSRBIG00000041250	NOP14	99	35.034	Rhinopithecus_bieti
ENSCSAVG00000001561	-	93	42.359	ENSRROG00000045728	NOP14	99	34.966	Rhinopithecus_roxellana
ENSCSAVG00000001561	-	92	31.250	YDL148C	NOP14	93	31.410	Saccharomyces_cerevisiae
ENSCSAVG00000001561	-	98	34.443	ENSSBOG00000034906	NOP14	98	35.532	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001561	-	95	35.238	ENSSHAG00000010914	NOP14	97	36.343	Sarcophilus_harrisii
ENSCSAVG00000001561	-	80	46.885	ENSSFOG00015022736	nop14	99	34.181	Scleropages_formosus
ENSCSAVG00000001561	-	79	44.518	ENSSMAG00000005394	nop14	99	34.234	Scophthalmus_maximus
ENSCSAVG00000001561	-	79	45.545	ENSSDUG00000015804	nop14	99	35.682	Seriola_dumerili
ENSCSAVG00000001561	-	82	44.762	ENSSLDG00000007570	nop14	99	34.821	Seriola_lalandi_dorsalis
ENSCSAVG00000001561	-	93	32.048	ENSSPUG00000013347	NOP14	99	32.530	Sphenodon_punctatus
ENSCSAVG00000001561	-	79	46.512	ENSSPAG00000003486	nop14	99	34.938	Stegastes_partitus
ENSCSAVG00000001561	-	97	34.306	ENSSSCG00000008693	NOP14	99	33.080	Sus_scrofa
ENSCSAVG00000001561	-	96	35.104	ENSTGUG00000010455	NOP14	99	35.219	Taeniopygia_guttata
ENSCSAVG00000001561	-	80	46.711	ENSTRUG00000009735	nop14	99	35.538	Takifugu_rubripes
ENSCSAVG00000001561	-	99	33.941	ENSTNIG00000018766	nop14	99	33.181	Tetraodon_nigroviridis
ENSCSAVG00000001561	-	58	41.743	ENSTBEG00000013627	NOP14	66	32.580	Tupaia_belangeri
ENSCSAVG00000001561	-	62	41.525	ENSTTRG00000009484	NOP14	82	42.593	Tursiops_truncatus
ENSCSAVG00000001561	-	90	43.478	ENSUAMG00000016302	NOP14	96	34.306	Ursus_americanus
ENSCSAVG00000001561	-	86	40.854	ENSUMAG00000006697	NOP14	99	31.548	Ursus_maritimus
ENSCSAVG00000001561	-	95	40.897	ENSVVUG00000023936	NOP14	97	35.120	Vulpes_vulpes
ENSCSAVG00000001561	-	95	33.178	ENSXETG00000014711	nop14	98	33.146	Xenopus_tropicalis
ENSCSAVG00000001561	-	79	45.545	ENSXCOG00000002527	nop14	99	34.045	Xiphophorus_couchianus
ENSCSAVG00000001561	-	79	45.545	ENSXMAG00000014137	nop14	99	34.305	Xiphophorus_maculatus