EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2441 bases
Position: chrreftig_312:679911-682351
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002671	Img2	PF05046.14	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002713	-	573	-	ENSCSAVP00000002671	173 (aa)	-	H2YBH3

Gene Model

Click here to download ENSCSAVG00000001577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001577	-	77	44.361	ENSG00000149792	MRPL49	80	44.361	Homo_sapiens
ENSCSAVG00000001577	-	73	43.651	ENSAPOG00000017939	MRPL49	70	43.651	Acanthochromis_polyacanthus
ENSCSAVG00000001577	-	75	44.186	ENSAMEG00000017672	MRPL49	80	43.609	Ailuropoda_melanoleuca
ENSCSAVG00000001577	-	73	42.857	ENSACIG00000006080	MRPL49	76	42.857	Amphilophus_citrinellus
ENSCSAVG00000001577	-	73	42.857	ENSAOCG00000018785	MRPL49	70	42.857	Amphiprion_ocellaris
ENSCSAVG00000001577	-	73	42.857	ENSAPEG00000017747	MRPL49	70	42.857	Amphiprion_percula
ENSCSAVG00000001577	-	100	35.955	ENSATEG00000023045	MRPL49	100	35.955	Anabas_testudineus
ENSCSAVG00000001577	-	73	44.444	ENSACAG00000010808	MRPL49	94	44.444	Anolis_carolinensis
ENSCSAVG00000001577	-	75	44.186	ENSANAG00000034865	MRPL49	80	43.609	Aotus_nancymaae
ENSCSAVG00000001577	-	73	42.857	ENSACLG00000009050	MRPL49	73	42.857	Astatotilapia_calliptera
ENSCSAVG00000001577	-	79	41.912	ENSAMXG00000003487	MRPL49	79	41.912	Astyanax_mexicanus
ENSCSAVG00000001577	-	82	42.958	ENSBTAG00000005075	MRPL49	87	42.958	Bos_taurus
ENSCSAVG00000001577	-	71	32.576	WBGene00011247	mrpl-49	71	32.576	Caenorhabditis_elegans
ENSCSAVG00000001577	-	75	44.186	ENSCJAG00000043917	MRPL49	80	43.609	Callithrix_jacchus
ENSCSAVG00000001577	-	75	42.636	ENSCAFG00000013928	MRPL49	80	42.105	Canis_familiaris
ENSCSAVG00000001577	-	75	42.636	ENSCAFG00020014941	MRPL49	82	42.105	Canis_lupus_dingo
ENSCSAVG00000001577	-	79	42.647	ENSCHIG00000013156	MRPL49	82	42.647	Capra_hircus
ENSCSAVG00000001577	-	77	43.284	ENSTSYG00000014666	MRPL49	81	43.284	Carlito_syrichta
ENSCSAVG00000001577	-	77	41.353	ENSCAPG00000003717	MRPL49	95	41.353	Cavia_aperea
ENSCSAVG00000001577	-	86	38.562	ENSCPOG00000032785	MRPL49	92	38.562	Cavia_porcellus
ENSCSAVG00000001577	-	75	44.186	ENSCCAG00000018444	MRPL49	78	44.186	Cebus_capucinus
ENSCSAVG00000001577	-	77	43.284	ENSCATG00000044183	MRPL49	81	43.284	Cercocebus_atys
ENSCSAVG00000001577	-	77	42.857	ENSCLAG00000016311	MRPL49	80	42.857	Chinchilla_lanigera
ENSCSAVG00000001577	-	75	44.615	ENSCSAG00000007671	-	78	44.615	Chlorocebus_sabaeus
ENSCSAVG00000001577	-	75	42.636	ENSCSAG00000000513	-	80	42.105	Chlorocebus_sabaeus
ENSCSAVG00000001577	-	73	44.444	ENSCHOG00000012855	MRPL49	78	42.636	Choloepus_hoffmanni
ENSCSAVG00000001577	-	73	47.619	ENSCPBG00000023636	-	71	47.619	Chrysemys_picta_bellii
ENSCSAVG00000001577	-	100	63.218	ENSCING00000000953	-	100	63.218	Ciona_intestinalis
ENSCSAVG00000001577	-	75	44.186	ENSCANG00000041392	MRPL49	78	44.186	Colobus_angolensis_palliatus
ENSCSAVG00000001577	-	73	44.444	ENSCGRG00001024245	Mrpl49	76	44.444	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001577	-	73	42.063	ENSCGRG00000001386	Mrpl49	76	42.063	Cricetulus_griseus_crigri
ENSCSAVG00000001577	-	73	44.444	ENSCSEG00000003115	MRPL49	70	44.444	Cynoglossus_semilaevis
ENSCSAVG00000001577	-	77	38.346	ENSCVAG00000011562	MRPL49	79	38.346	Cyprinodon_variegatus
ENSCSAVG00000001577	-	88	38.312	ENSDARG00000075422	MRPL49	87	38.312	Danio_rerio
ENSCSAVG00000001577	-	98	37.870	ENSDNOG00000004494	-	92	37.870	Dasypus_novemcinctus
ENSCSAVG00000001577	-	98	37.870	ENSDNOG00000034205	-	97	37.870	Dasypus_novemcinctus
ENSCSAVG00000001577	-	71	37.903	FBgn0030433	mRpL49	68	37.903	Drosophila_melanogaster
ENSCSAVG00000001577	-	69	33.613	ENSETEG00000010571	MRPL49	72	33.613	Echinops_telfairi
ENSCSAVG00000001577	-	79	42.336	ENSEBUG00000003645	MRPL49	67	42.336	Eptatretus_burgeri
ENSCSAVG00000001577	-	75	44.186	ENSEASG00005018211	MRPL49	78	44.186	Equus_asinus_asinus
ENSCSAVG00000001577	-	75	44.961	ENSECAG00000022196	MRPL49	80	44.361	Equus_caballus
ENSCSAVG00000001577	-	50	37.931	ENSEEUG00000008212	-	52	37.931	Erinaceus_europaeus
ENSCSAVG00000001577	-	73	41.270	ENSELUG00000016206	mrpl49	71	41.270	Esox_lucius
ENSCSAVG00000001577	-	75	44.186	ENSFCAG00000006256	MRPL49	80	43.609	Felis_catus
ENSCSAVG00000001577	-	77	42.105	ENSFDAG00000011518	MRPL49	80	42.105	Fukomys_damarensis
ENSCSAVG00000001577	-	91	37.500	ENSFHEG00000011616	MRPL49	90	37.500	Fundulus_heteroclitus
ENSCSAVG00000001577	-	95	36.416	ENSGAFG00000015749	MRPL49	99	36.416	Gambusia_affinis
ENSCSAVG00000001577	-	58	39.000	ENSGACG00000013129	-	74	41.270	Gasterosteus_aculeatus
ENSCSAVG00000001577	-	73	47.619	ENSGAGG00000025862	MRPL49	71	47.619	Gopherus_agassizii
ENSCSAVG00000001577	-	75	45.385	ENSGGOG00000024514	MRPL49	78	45.385	Gorilla_gorilla
ENSCSAVG00000001577	-	73	42.063	ENSHBUG00000014033	MRPL49	73	42.063	Haplochromis_burtoni
ENSCSAVG00000001577	-	77	42.105	ENSHGLG00000012648	MRPL49	80	42.105	Heterocephalus_glaber_female
ENSCSAVG00000001577	-	77	42.105	ENSHGLG00100014020	MRPL49	80	42.105	Heterocephalus_glaber_male
ENSCSAVG00000001577	-	72	37.097	ENSHCOG00000014496	-	91	37.097	Hippocampus_comes
ENSCSAVG00000001577	-	74	39.062	ENSIPUG00000017564	MRPL49	74	39.062	Ictalurus_punctatus
ENSCSAVG00000001577	-	75	44.186	ENSSTOG00000003344	MRPL49	80	43.609	Ictidomys_tridecemlineatus
ENSCSAVG00000001577	-	55	37.895	ENSJJAG00000015905	Mrpl49	79	37.895	Jaculus_jaculus
ENSCSAVG00000001577	-	73	39.683	ENSKMAG00000005174	MRPL49	70	39.683	Kryptolebias_marmoratus
ENSCSAVG00000001577	-	73	40.476	ENSLBEG00000011553	MRPL49	70	40.476	Labrus_bergylta
ENSCSAVG00000001577	-	73	42.857	ENSLACG00000007674	MRPL49	77	42.857	Latimeria_chalumnae
ENSCSAVG00000001577	-	83	42.657	ENSLAFG00000001690	MRPL49	86	42.657	Loxodonta_africana
ENSCSAVG00000001577	-	64	43.636	ENSMFAG00000023679	-	78	42.982	Macaca_fascicularis
ENSCSAVG00000001577	-	75	44.186	ENSMFAG00000033395	MRPL49	78	44.186	Macaca_fascicularis
ENSCSAVG00000001577	-	64	44.545	ENSMMUG00000046617	-	78	43.860	Macaca_mulatta
ENSCSAVG00000001577	-	75	44.961	ENSMMUG00000018778	MRPL49	78	44.961	Macaca_mulatta
ENSCSAVG00000001577	-	75	43.411	ENSMNEG00000038966	MRPL49	78	43.411	Macaca_nemestrina
ENSCSAVG00000001577	-	75	44.186	ENSMLEG00000026765	-	80	43.609	Mandrillus_leucophaeus
ENSCSAVG00000001577	-	75	44.186	ENSMLEG00000032826	-	78	44.186	Mandrillus_leucophaeus
ENSCSAVG00000001577	-	73	42.063	ENSMAMG00000015760	MRPL49	73	42.063	Mastacembelus_armatus
ENSCSAVG00000001577	-	73	42.063	ENSMZEG00005012362	MRPL49	73	42.063	Maylandia_zebra
ENSCSAVG00000001577	-	50	37.931	ENSMAUG00000008380	Mrpl49	98	37.931	Mesocricetus_auratus
ENSCSAVG00000001577	-	70	42.975	ENSMICG00000047047	-	74	42.975	Microcebus_murinus
ENSCSAVG00000001577	-	55	37.755	ENSMICG00000016604	-	69	37.755	Microcebus_murinus
ENSCSAVG00000001577	-	77	40.602	ENSMOCG00000015528	Mrpl49	80	40.602	Microtus_ochrogaster
ENSCSAVG00000001577	-	73	38.889	ENSMMOG00000017361	MRPL49	71	38.889	Mola_mola
ENSCSAVG00000001577	-	73	42.857	ENSMALG00000002403	MRPL49	70	42.857	Monopterus_albus
ENSCSAVG00000001577	-	77	41.353	MGP_CAROLIEiJ_G0022584	Mrpl49	80	41.353	Mus_caroli
ENSCSAVG00000001577	-	77	41.353	ENSMUSG00000007338	Mrpl49	80	41.353	Mus_musculus
ENSCSAVG00000001577	-	77	41.353	MGP_PahariEiJ_G0014078	Mrpl49	80	41.353	Mus_pahari
ENSCSAVG00000001577	-	77	41.353	MGP_SPRETEiJ_G0023495	Mrpl49	80	41.353	Mus_spretus
ENSCSAVG00000001577	-	75	43.411	ENSMPUG00000012227	MRPL49	78	43.411	Mustela_putorius_furo
ENSCSAVG00000001577	-	75	43.077	ENSMLUG00000015373	MRPL49	78	43.077	Myotis_lucifugus
ENSCSAVG00000001577	-	75	42.636	ENSNGAG00000008255	Mrpl49	78	42.636	Nannospalax_galili
ENSCSAVG00000001577	-	75	42.636	ENSNLEG00000005505	MRPL49	78	42.636	Nomascus_leucogenys
ENSCSAVG00000001577	-	73	40.476	ENSMEUG00000009437	MRPL49	90	40.476	Notamacropus_eugenii
ENSCSAVG00000001577	-	76	43.939	ENSOPRG00000009881	MRPL49	80	43.939	Ochotona_princeps
ENSCSAVG00000001577	-	75	40.458	ENSODEG00000000580	-	76	40.458	Octodon_degus
ENSCSAVG00000001577	-	75	41.860	ENSODEG00000017907	-	78	41.860	Octodon_degus
ENSCSAVG00000001577	-	75	39.535	ENSODEG00000018605	-	78	39.535	Octodon_degus
ENSCSAVG00000001577	-	73	42.857	ENSONIG00000021419	MRPL49	71	42.857	Oreochromis_niloticus
ENSCSAVG00000001577	-	75	41.860	ENSOCUG00000014882	MRPL49	78	41.860	Oryctolagus_cuniculus
ENSCSAVG00000001577	-	73	41.270	ENSORLG00000001995	MRPL49	72	41.270	Oryzias_latipes
ENSCSAVG00000001577	-	73	41.270	ENSORLG00020021002	MRPL49	74	41.270	Oryzias_latipes_hni
ENSCSAVG00000001577	-	73	40.476	ENSORLG00015015420	MRPL49	76	40.476	Oryzias_latipes_hsok
ENSCSAVG00000001577	-	73	38.889	ENSOMEG00000011162	MRPL49	74	38.889	Oryzias_melastigma
ENSCSAVG00000001577	-	75	44.961	ENSOGAG00000015018	MRPL49	78	44.961	Otolemur_garnettii
ENSCSAVG00000001577	-	79	43.382	ENSOARG00000012774	MRPL49	81	43.382	Ovis_aries
ENSCSAVG00000001577	-	77	44.361	ENSPPAG00000037118	MRPL49	80	44.361	Pan_paniscus
ENSCSAVG00000001577	-	75	44.186	ENSPPRG00000024886	MRPL49	80	43.609	Panthera_pardus
ENSCSAVG00000001577	-	75	44.186	ENSPTIG00000021250	MRPL49	80	43.609	Panthera_tigris_altaica
ENSCSAVG00000001577	-	77	44.361	ENSPTRG00000003867	MRPL49	80	44.361	Pan_troglodytes
ENSCSAVG00000001577	-	75	44.186	ENSPANG00000004414	-	78	44.186	Papio_anubis
ENSCSAVG00000001577	-	75	40.310	ENSPANG00000033737	-	77	39.850	Papio_anubis
ENSCSAVG00000001577	-	100	35.260	ENSPKIG00000023054	MRPL49	100	35.260	Paramormyrops_kingsleyae
ENSCSAVG00000001577	-	73	36.508	ENSPMGG00000013887	MRPL49	70	36.508	Periophthalmus_magnuspinnatus
ENSCSAVG00000001577	-	69	35.294	ENSPEMG00000022676	-	77	35.294	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001577	-	73	44.882	ENSPMAG00000000130	MRPL49	92	44.882	Petromyzon_marinus
ENSCSAVG00000001577	-	90	36.875	ENSPFOG00000020078	MRPL49	92	36.875	Poecilia_formosa
ENSCSAVG00000001577	-	91	37.342	ENSPFOG00000020458	-	92	36.875	Poecilia_formosa
ENSCSAVG00000001577	-	100	36.313	ENSPLAG00000017623	-	100	36.313	Poecilia_latipinna
ENSCSAVG00000001577	-	90	36.875	ENSPLAG00000006894	MRPL49	98	34.884	Poecilia_latipinna
ENSCSAVG00000001577	-	100	36.313	ENSPMEG00000023131	MRPL49	100	36.313	Poecilia_mexicana
ENSCSAVG00000001577	-	90	37.500	ENSPREG00000005735	MRPL49	92	37.500	Poecilia_reticulata
ENSCSAVG00000001577	-	75	44.186	ENSPPYG00000003076	MRPL49	78	44.186	Pongo_abelii
ENSCSAVG00000001577	-	50	37.931	ENSPCAG00000015282	MRPL49	52	37.931	Procavia_capensis
ENSCSAVG00000001577	-	94	37.654	ENSPCOG00000025188	MRPL49	98	37.654	Propithecus_coquereli
ENSCSAVG00000001577	-	87	40.127	ENSPVAG00000007916	MRPL49	95	40.127	Pteropus_vampyrus
ENSCSAVG00000001577	-	73	42.063	ENSPNYG00000005274	MRPL49	75	42.063	Pundamilia_nyererei
ENSCSAVG00000001577	-	73	41.270	ENSPNAG00000004978	MRPL49	71	41.270	Pygocentrus_nattereri
ENSCSAVG00000001577	-	77	41.353	ENSRNOG00000020975	Mrpl49	80	41.353	Rattus_norvegicus
ENSCSAVG00000001577	-	75	44.186	ENSRBIG00000033618	MRPL49	78	44.186	Rhinopithecus_bieti
ENSCSAVG00000001577	-	75	44.186	ENSRROG00000044624	MRPL49	78	44.186	Rhinopithecus_roxellana
ENSCSAVG00000001577	-	75	43.411	ENSSBOG00000028984	MRPL49	78	43.411	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001577	-	73	41.270	ENSSHAG00000000390	MRPL49	90	41.270	Sarcophilus_harrisii
ENSCSAVG00000001577	-	81	38.462	ENSSFOG00015019687	MRPL49	94	40.559	Scleropages_formosus
ENSCSAVG00000001577	-	73	39.683	ENSSMAG00000001559	MRPL49	70	39.683	Scophthalmus_maximus
ENSCSAVG00000001577	-	92	38.415	ENSSDUG00000013816	MRPL49	97	38.415	Seriola_dumerili
ENSCSAVG00000001577	-	73	42.063	ENSSLDG00000001537	MRPL49	71	42.063	Seriola_lalandi_dorsalis
ENSCSAVG00000001577	-	55	45.263	ENSSARG00000011597	MRPL49	87	45.263	Sorex_araneus
ENSCSAVG00000001577	-	73	44.444	ENSSPAG00000000302	MRPL49	70	44.444	Stegastes_partitus
ENSCSAVG00000001577	-	75	44.186	ENSSSCG00000013001	MRPL49	78	44.186	Sus_scrofa
ENSCSAVG00000001577	-	73	39.683	ENSTRUG00000002203	MRPL49	69	39.683	Takifugu_rubripes
ENSCSAVG00000001577	-	83	34.247	ENSTNIG00000003284	MRPL49	86	34.247	Tetraodon_nigroviridis
ENSCSAVG00000001577	-	77	42.105	ENSTBEG00000007929	MRPL49	80	42.105	Tupaia_belangeri
ENSCSAVG00000001577	-	75	42.636	ENSTTRG00000017247	MRPL49	78	42.636	Tursiops_truncatus
ENSCSAVG00000001577	-	75	44.186	ENSUAMG00000012283	MRPL49	80	43.609	Ursus_americanus
ENSCSAVG00000001577	-	75	44.186	ENSUMAG00000008222	MRPL49	80	43.609	Ursus_maritimus
ENSCSAVG00000001577	-	75	42.636	ENSVVUG00000027381	MRPL49	80	42.105	Vulpes_vulpes
ENSCSAVG00000001577	-	73	41.270	ENSXETG00000031584	MRPL49	91	41.270	Xenopus_tropicalis
ENSCSAVG00000001577	-	90	38.750	ENSXCOG00000002126	MRPL49	92	38.750	Xiphophorus_couchianus
ENSCSAVG00000001577	-	98	37.143	ENSXMAG00000024309	MRPL49	97	37.143	Xiphophorus_maculatus