EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001583 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 17503 bases
Position: chrreftig_312:717507-735009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002679	MMR_HSR1	PF01926.23	1.2e-13	1	1
ENSCSAVP00000002678	MMR_HSR1	PF01926.23	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002721	-	2040	-	ENSCSAVP00000002679	680 (aa)	-	H2YBI1
ENSCSAVT00000002720	-	2085	-	ENSCSAVP00000002678	695 (aa)	-	H2YBI0

Gene Model

Click here to download ENSCSAVG00000001583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001583	-	99	45.694	ENSG00000134697	GNL2	97	46.229	Homo_sapiens
ENSCSAVG00000001583	-	95	44.363	ENSAPOG00000024507	gnl2	97	45.703	Acanthochromis_polyacanthus
ENSCSAVG00000001583	-	99	45.492	ENSAMEG00000001032	GNL2	97	45.480	Ailuropoda_melanoleuca
ENSCSAVG00000001583	-	66	55.724	ENSACIG00000018346	gnl2	97	44.260	Amphilophus_citrinellus
ENSCSAVG00000001583	-	95	44.298	ENSAOCG00000014396	gnl2	97	45.479	Amphiprion_ocellaris
ENSCSAVG00000001583	-	95	44.080	ENSAPEG00000005375	gnl2	97	45.479	Amphiprion_percula
ENSCSAVG00000001583	-	75	51.017	ENSATEG00000009311	gnl2	97	43.933	Anabas_testudineus
ENSCSAVG00000001583	-	98	46.591	ENSAPLG00000006508	GNL2	97	46.250	Anas_platyrhynchos
ENSCSAVG00000001583	-	98	45.390	ENSACAG00000017224	GNL2	97	46.089	Anolis_carolinensis
ENSCSAVG00000001583	-	99	44.766	ENSANAG00000023449	GNL2	97	45.076	Aotus_nancymaae
ENSCSAVG00000001583	-	75	51.810	ENSAMXG00000020288	gnl2	97	45.809	Astyanax_mexicanus
ENSCSAVG00000001583	-	99	46.314	ENSBTAG00000003849	GNL2	97	45.931	Bos_taurus
ENSCSAVG00000001583	-	69	49.068	WBGene00003596	ngp-1	75	51.398	Caenorhabditis_elegans
ENSCSAVG00000001583	-	99	44.766	ENSCJAG00000001980	GNL2	97	45.125	Callithrix_jacchus
ENSCSAVG00000001583	-	99	46.047	ENSCAFG00000003289	GNL2	97	45.833	Canis_familiaris
ENSCSAVG00000001583	-	99	46.844	ENSCAFG00020008050	GNL2	97	46.528	Canis_lupus_dingo
ENSCSAVG00000001583	-	99	45.518	ENSCHIG00000015731	GNL2	97	45.505	Capra_hircus
ENSCSAVG00000001583	-	99	44.909	ENSTSYG00000004537	GNL2	97	45.391	Carlito_syrichta
ENSCSAVG00000001583	-	96	42.814	ENSCAPG00000017481	GNL2	97	43.529	Cavia_aperea
ENSCSAVG00000001583	-	96	44.444	ENSCPOG00000026804	GNL2	97	45.170	Cavia_porcellus
ENSCSAVG00000001583	-	99	45.341	ENSCCAG00000034952	GNL2	97	46.100	Cebus_capucinus
ENSCSAVG00000001583	-	99	45.041	ENSCATG00000026503	GNL2	97	46.304	Cercocebus_atys
ENSCSAVG00000001583	-	99	44.904	ENSCLAG00000012504	GNL2	97	44.875	Chinchilla_lanigera
ENSCSAVG00000001583	-	99	45.694	ENSCSAG00000001110	GNL2	97	46.229	Chlorocebus_sabaeus
ENSCSAVG00000001583	-	65	51.667	ENSCHOG00000009509	GNL2	64	52.542	Choloepus_hoffmanni
ENSCSAVG00000001583	-	98	45.339	ENSCPBG00000018483	GNL2	97	45.983	Chrysemys_picta_bellii
ENSCSAVG00000001583	-	78	73.260	ENSCING00000010696	-	99	71.609	Ciona_intestinalis
ENSCSAVG00000001583	-	99	43.412	ENSCANG00000036748	GNL2	97	43.994	Colobus_angolensis_palliatus
ENSCSAVG00000001583	-	99	45.616	ENSCGRG00001016733	Gnl2	97	46.260	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001583	-	99	45.616	ENSCGRG00000017418	Gnl2	97	46.260	Cricetulus_griseus_crigri
ENSCSAVG00000001583	-	97	45.081	ENSCSEG00000020296	gnl2	97	45.649	Cynoglossus_semilaevis
ENSCSAVG00000001583	-	82	42.063	ENSCVAG00000017712	gnl2	97	43.648	Cyprinodon_variegatus
ENSCSAVG00000001583	-	96	44.176	ENSDARG00000098080	gnl2	98	75.188	Danio_rerio
ENSCSAVG00000001583	-	99	45.365	ENSDNOG00000033314	-	97	45.798	Dasypus_novemcinctus
ENSCSAVG00000001583	-	99	45.188	ENSDNOG00000016466	-	97	45.619	Dasypus_novemcinctus
ENSCSAVG00000001583	-	99	41.975	ENSDORG00000014429	Gnl2	97	43.551	Dipodomys_ordii
ENSCSAVG00000001583	-	99	44.650	FBgn0034243	Ns2	98	44.571	Drosophila_melanogaster
ENSCSAVG00000001583	-	88	44.025	ENSETEG00000016674	GNL2	99	43.887	Echinops_telfairi
ENSCSAVG00000001583	-	99	43.656	ENSEBUG00000005300	gnl2	99	44.077	Eptatretus_burgeri
ENSCSAVG00000001583	-	99	45.330	ENSEASG00005012227	GNL2	97	45.480	Equus_asinus_asinus
ENSCSAVG00000001583	-	99	45.655	ENSECAG00000008068	GNL2	97	45.480	Equus_caballus
ENSCSAVG00000001583	-	88	53.704	ENSEEUG00000011345	GNL2	85	53.704	Erinaceus_europaeus
ENSCSAVG00000001583	-	98	45.310	ENSELUG00000000675	gnl2	97	43.989	Esox_lucius
ENSCSAVG00000001583	-	99	47.207	ENSFCAG00000008760	GNL2	97	46.564	Felis_catus
ENSCSAVG00000001583	-	98	46.218	ENSFALG00000000909	GNL2	97	45.961	Ficedula_albicollis
ENSCSAVG00000001583	-	99	45.341	ENSFDAG00000013274	GNL2	97	45.238	Fukomys_damarensis
ENSCSAVG00000001583	-	65	45.333	ENSFHEG00000022857	gnl2	84	45.796	Fundulus_heteroclitus
ENSCSAVG00000001583	-	98	46.968	ENSGALG00000001973	GNL2	89	47.133	Gallus_gallus
ENSCSAVG00000001583	-	96	44.924	ENSGAFG00000008794	gnl2	97	45.604	Gambusia_affinis
ENSCSAVG00000001583	-	96	44.684	ENSGACG00000013692	gnl2	97	45.063	Gasterosteus_aculeatus
ENSCSAVG00000001583	-	83	43.306	ENSGAGG00000003905	GNL2	97	43.506	Gopherus_agassizii
ENSCSAVG00000001583	-	99	45.706	ENSGGOG00000007704	GNL2	97	46.089	Gorilla_gorilla
ENSCSAVG00000001583	-	99	45.179	ENSHGLG00000013728	GNL2	97	45.328	Heterocephalus_glaber_female
ENSCSAVG00000001583	-	98	39.504	ENSHGLG00000007433	-	98	39.884	Heterocephalus_glaber_female
ENSCSAVG00000001583	-	98	35.601	ENSHGLG00100016036	-	93	48.598	Heterocephalus_glaber_male
ENSCSAVG00000001583	-	99	45.179	ENSHGLG00100002593	GNL2	97	45.328	Heterocephalus_glaber_male
ENSCSAVG00000001583	-	98	39.504	ENSHGLG00100001365	-	98	39.884	Heterocephalus_glaber_male
ENSCSAVG00000001583	-	97	41.234	ENSHCOG00000012109	gnl2	96	42.120	Hippocampus_comes
ENSCSAVG00000001583	-	95	43.687	ENSIPUG00000017079	gnl2	97	44.475	Ictalurus_punctatus
ENSCSAVG00000001583	-	99	44.383	ENSSTOG00000005217	GNL2	97	44.847	Ictidomys_tridecemlineatus
ENSCSAVG00000001583	-	99	45.215	ENSJJAG00000010798	Gnl2	97	45.531	Jaculus_jaculus
ENSCSAVG00000001583	-	98	43.828	ENSKMAG00000018855	gnl2	97	44.895	Kryptolebias_marmoratus
ENSCSAVG00000001583	-	96	43.820	ENSLBEG00000008518	gnl2	97	45.219	Labrus_bergylta
ENSCSAVG00000001583	-	98	46.294	ENSLACG00000016998	GNL2	97	47.139	Latimeria_chalumnae
ENSCSAVG00000001583	-	99	44.958	ENSLAFG00000018723	GNL2	97	44.972	Loxodonta_africana
ENSCSAVG00000001583	-	99	45.392	ENSMFAG00000039033	GNL2	97	46.229	Macaca_fascicularis
ENSCSAVG00000001583	-	99	45.317	ENSMMUG00000008419	GNL2	97	46.229	Macaca_mulatta
ENSCSAVG00000001583	-	99	45.746	ENSMNEG00000043438	GNL2	97	46.078	Macaca_nemestrina
ENSCSAVG00000001583	-	99	44.413	ENSMLEG00000044421	GNL2	97	45.184	Mandrillus_leucophaeus
ENSCSAVG00000001583	-	98	45.637	ENSMAMG00000007823	gnl2	97	45.827	Mastacembelus_armatus
ENSCSAVG00000001583	-	97	44.333	ENSMZEG00005007393	gnl2	96	44.304	Maylandia_zebra
ENSCSAVG00000001583	-	63	56.885	ENSMZEG00005008412	GNL2	91	44.970	Maylandia_zebra
ENSCSAVG00000001583	-	98	41.886	ENSMGAG00000003267	GNL2	97	42.025	Meleagris_gallopavo
ENSCSAVG00000001583	-	99	44.552	ENSMAUG00000018529	Gnl2	97	44.875	Mesocricetus_auratus
ENSCSAVG00000001583	-	81	54.291	ENSMOCG00000016365	Gnl2	87	57.296	Microtus_ochrogaster
ENSCSAVG00000001583	-	74	51.908	ENSMMOG00000018551	gnl2	97	44.635	Mola_mola
ENSCSAVG00000001583	-	98	45.262	ENSMODG00000017773	GNL2	97	46.218	Monodelphis_domestica
ENSCSAVG00000001583	-	97	45.050	ENSMALG00000011736	gnl2	97	45.517	Monopterus_albus
ENSCSAVG00000001583	-	99	45.670	MGP_CAROLIEiJ_G0026458	Gnl2	97	46.229	Mus_caroli
ENSCSAVG00000001583	-	99	46.345	ENSMUSG00000028869	Gnl2	97	46.648	Mus_musculus
ENSCSAVG00000001583	-	99	45.480	MGP_PahariEiJ_G0028789	Gnl2	97	46.154	Mus_pahari
ENSCSAVG00000001583	-	99	46.207	MGP_SPRETEiJ_G0027437	Gnl2	97	46.508	Mus_spretus
ENSCSAVG00000001583	-	99	45.845	ENSMPUG00000014709	GNL2	97	44.918	Mustela_putorius_furo
ENSCSAVG00000001583	-	99	44.354	ENSMLUG00000017139	GNL2	97	44.537	Myotis_lucifugus
ENSCSAVG00000001583	-	99	45.215	ENSNGAG00000005990	Gnl2	97	45.076	Nannospalax_galili
ENSCSAVG00000001583	-	96	43.950	ENSNBRG00000010291	gnl2	97	44.658	Neolamprologus_brichardi
ENSCSAVG00000001583	-	99	46.175	ENSNLEG00000011599	GNL2	97	46.025	Nomascus_leucogenys
ENSCSAVG00000001583	-	88	43.062	ENSMEUG00000015141	GNL2	92	42.995	Notamacropus_eugenii
ENSCSAVG00000001583	-	63	50.676	ENSOPRG00000002625	GNL2	58	51.724	Ochotona_princeps
ENSCSAVG00000001583	-	76	50.642	ENSOANG00000002057	GNL2	97	44.505	Ornithorhynchus_anatinus
ENSCSAVG00000001583	-	99	44.945	ENSOCUG00000010877	GNL2	96	44.766	Oryctolagus_cuniculus
ENSCSAVG00000001583	-	97	45.534	ENSORLG00000014645	gnl2	97	45.965	Oryzias_latipes
ENSCSAVG00000001583	-	97	43.681	ENSORLG00020018867	gnl2	97	44.856	Oryzias_latipes_hni
ENSCSAVG00000001583	-	97	44.368	ENSORLG00015003936	gnl2	97	45.267	Oryzias_latipes_hsok
ENSCSAVG00000001583	-	97	45.758	ENSOMEG00000019611	gnl2	97	45.787	Oryzias_melastigma
ENSCSAVG00000001583	-	99	41.064	ENSOGAG00000008643	GNL2	97	42.265	Otolemur_garnettii
ENSCSAVG00000001583	-	99	45.014	ENSOARG00000019788	GNL2	97	45.455	Ovis_aries
ENSCSAVG00000001583	-	99	45.694	ENSPPAG00000001559	GNL2	89	46.078	Pan_paniscus
ENSCSAVG00000001583	-	99	46.927	ENSPPRG00000010528	GNL2	97	46.704	Panthera_pardus
ENSCSAVG00000001583	-	99	46.788	ENSPTIG00000015095	GNL2	97	46.564	Panthera_tigris_altaica
ENSCSAVG00000001583	-	99	45.694	ENSPTRG00000000549	GNL2	97	46.229	Pan_troglodytes
ENSCSAVG00000001583	-	99	45.317	ENSPANG00000025285	GNL2	97	46.078	Papio_anubis
ENSCSAVG00000001583	-	99	45.049	ENSPKIG00000005438	gnl2	97	46.304	Paramormyrops_kingsleyae
ENSCSAVG00000001583	-	95	45.547	ENSPSIG00000007800	GNL2	97	47.110	Pelodiscus_sinensis
ENSCSAVG00000001583	-	64	56.306	ENSPMGG00000002306	gnl2	97	43.636	Periophthalmus_magnuspinnatus
ENSCSAVG00000001583	-	99	45.913	ENSPEMG00000021234	Gnl2	97	45.983	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001583	-	98	46.473	ENSPMAG00000000974	gnl2	97	46.739	Petromyzon_marinus
ENSCSAVG00000001583	-	98	46.220	ENSPCIG00000000135	GNL2	97	46.036	Phascolarctos_cinereus
ENSCSAVG00000001583	-	95	43.872	ENSPFOG00000012893	gnl2	97	45.442	Poecilia_formosa
ENSCSAVG00000001583	-	94	43.362	ENSPLAG00000012483	gnl2	98	44.837	Poecilia_latipinna
ENSCSAVG00000001583	-	94	43.626	ENSPMEG00000019133	gnl2	98	45.248	Poecilia_mexicana
ENSCSAVG00000001583	-	96	43.503	ENSPREG00000005988	gnl2	97	45.804	Poecilia_reticulata
ENSCSAVG00000001583	-	99	45.417	ENSPPYG00000001529	GNL2	97	45.188	Pongo_abelii
ENSCSAVG00000001583	-	83	50.000	ENSPCAG00000015772	GNL2	80	50.000	Procavia_capensis
ENSCSAVG00000001583	-	99	45.241	ENSPCOG00000016681	GNL2	97	45.607	Propithecus_coquereli
ENSCSAVG00000001583	-	87	54.502	ENSPVAG00000010131	GNL2	84	54.502	Pteropus_vampyrus
ENSCSAVG00000001583	-	95	45.075	ENSPNAG00000005426	gnl2	97	45.934	Pygocentrus_nattereri
ENSCSAVG00000001583	-	99	46.008	ENSRNOG00000009430	Gnl2	97	46.657	Rattus_norvegicus
ENSCSAVG00000001583	-	99	45.238	ENSRBIG00000038390	GNL2	97	45.810	Rhinopithecus_bieti
ENSCSAVG00000001583	-	99	44.904	ENSRROG00000014347	GNL2	97	45.125	Rhinopithecus_roxellana
ENSCSAVG00000001583	-	64	46.983	YNR053C	NOG2	93	47.300	Saccharomyces_cerevisiae
ENSCSAVG00000001583	-	99	44.613	ENSSBOG00000020194	GNL2	97	45.379	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001583	-	98	46.088	ENSSHAG00000012267	GNL2	97	47.117	Sarcophilus_harrisii
ENSCSAVG00000001583	-	97	45.621	ENSSFOG00015020300	gnl2	97	46.003	Scleropages_formosus
ENSCSAVG00000001583	-	99	45.492	ENSSMAG00000003472	gnl2	97	46.132	Scophthalmus_maximus
ENSCSAVG00000001583	-	95	44.000	ENSSDUG00000010382	gnl2	97	46.419	Seriola_dumerili
ENSCSAVG00000001583	-	95	45.882	ENSSLDG00000003122	gnl2	97	46.143	Seriola_lalandi_dorsalis
ENSCSAVG00000001583	-	95	55.626	ENSSARG00000011342	GNL2	97	44.986	Sorex_araneus
ENSCSAVG00000001583	-	98	45.078	ENSSPUG00000003826	GNL2	97	45.007	Sphenodon_punctatus
ENSCSAVG00000001583	-	95	45.324	ENSSPAG00000017473	gnl2	97	46.207	Stegastes_partitus
ENSCSAVG00000001583	-	99	45.455	ENSSSCG00000031631	GNL2	97	44.660	Sus_scrofa
ENSCSAVG00000001583	-	98	45.897	ENSTGUG00000001547	GNL2	97	46.750	Taeniopygia_guttata
ENSCSAVG00000001583	-	95	43.714	ENSTRUG00000009789	gnl2	97	44.521	Takifugu_rubripes
ENSCSAVG00000001583	-	95	43.015	ENSTNIG00000003733	gnl2	97	44.276	Tetraodon_nigroviridis
ENSCSAVG00000001583	-	89	58.400	ENSTBEG00000003443	GNL2	87	59.350	Tupaia_belangeri
ENSCSAVG00000001583	-	99	44.708	ENSTTRG00000008600	GNL2	97	43.819	Tursiops_truncatus
ENSCSAVG00000001583	-	99	45.655	ENSUAMG00000014123	GNL2	97	45.718	Ursus_americanus
ENSCSAVG00000001583	-	99	43.586	ENSUMAG00000000413	GNL2	97	43.646	Ursus_maritimus
ENSCSAVG00000001583	-	99	43.430	ENSVPAG00000001579	GNL2	97	44.383	Vicugna_pacos
ENSCSAVG00000001583	-	99	46.314	ENSVVUG00000023157	GNL2	97	46.250	Vulpes_vulpes
ENSCSAVG00000001583	-	98	46.999	ENSXETG00000002161	gnl2	97	46.924	Xenopus_tropicalis
ENSCSAVG00000001583	-	95	43.372	ENSXCOG00000001649	gnl2	97	43.882	Xiphophorus_couchianus
ENSCSAVG00000001583	-	72	52.362	ENSXMAG00000026406	-	95	55.957	Xiphophorus_maculatus
ENSCSAVG00000001583	-	95	45.378	ENSXMAG00000014898	gnl2	97	45.753	Xiphophorus_maculatus