EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001680 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3759 bases
Position: chrreftig_7:713144-716902
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002820	Gcd10p	PF04189.13	1.2e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002864	-	1296	-	ENSCSAVP00000002820	432 (aa)	-	H2YBX2

Gene Model

Click here to download ENSCSAVG00000001680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001680	-	94	38.140	ENSG00000089195	TRMT6	88	37.838	Homo_sapiens
ENSCSAVG00000001680	-	97	38.462	ENSAPOG00000008036	trmt6	93	40.136	Acanthochromis_polyacanthus
ENSCSAVG00000001680	-	94	37.907	ENSAMEG00000010635	TRMT6	87	38.600	Ailuropoda_melanoleuca
ENSCSAVG00000001680	-	94	39.268	ENSACIG00000004608	trmt6	89	39.953	Amphilophus_citrinellus
ENSCSAVG00000001680	-	94	38.537	ENSAOCG00000024322	trmt6	90	39.243	Amphiprion_ocellaris
ENSCSAVG00000001680	-	94	38.129	ENSAPEG00000017334	trmt6	91	38.837	Amphiprion_percula
ENSCSAVG00000001680	-	91	36.804	ENSATEG00000018498	trmt6	92	38.425	Anabas_testudineus
ENSCSAVG00000001680	-	90	39.855	ENSAPLG00000007761	TRMT6	92	40.515	Anas_platyrhynchos
ENSCSAVG00000001680	-	97	37.868	ENSACAG00000000575	TRMT6	91	38.427	Anolis_carolinensis
ENSCSAVG00000001680	-	94	38.140	ENSANAG00000021260	TRMT6	87	38.826	Aotus_nancymaae
ENSCSAVG00000001680	-	94	38.534	ENSACLG00000026034	trmt6	90	39.220	Astatotilapia_calliptera
ENSCSAVG00000001680	-	95	37.617	ENSAMXG00000017116	trmt6	90	39.229	Astyanax_mexicanus
ENSCSAVG00000001680	-	94	37.907	ENSBTAG00000001314	TRMT6	87	38.600	Bos_taurus
ENSCSAVG00000001680	-	94	38.140	ENSCJAG00000021296	TRMT6	87	38.826	Callithrix_jacchus
ENSCSAVG00000001680	-	94	37.907	ENSCAFG00000005969	TRMT6	87	38.600	Canis_familiaris
ENSCSAVG00000001680	-	94	37.907	ENSCAFG00020000777	TRMT6	87	38.600	Canis_lupus_dingo
ENSCSAVG00000001680	-	94	37.907	ENSCHIG00000010338	TRMT6	87	38.600	Capra_hircus
ENSCSAVG00000001680	-	94	38.140	ENSTSYG00000004286	TRMT6	87	38.826	Carlito_syrichta
ENSCSAVG00000001680	-	83	41.534	ENSCAPG00000015467	TRMT6	86	42.199	Cavia_aperea
ENSCSAVG00000001680	-	94	40.465	ENSCPOG00000013809	TRMT6	87	41.084	Cavia_porcellus
ENSCSAVG00000001680	-	94	37.907	ENSCCAG00000026939	TRMT6	87	38.600	Cebus_capucinus
ENSCSAVG00000001680	-	94	38.140	ENSCATG00000041111	TRMT6	87	38.826	Cercocebus_atys
ENSCSAVG00000001680	-	94	39.070	ENSCLAG00000013978	TRMT6	87	39.729	Chinchilla_lanigera
ENSCSAVG00000001680	-	94	38.372	ENSCSAG00000013461	TRMT6	87	39.052	Chlorocebus_sabaeus
ENSCSAVG00000001680	-	94	36.300	ENSCPBG00000023406	TRMT6	90	39.189	Chrysemys_picta_bellii
ENSCSAVG00000001680	-	99	62.723	ENSCING00000002472	-	98	62.500	Ciona_intestinalis
ENSCSAVG00000001680	-	94	38.605	ENSCANG00000002381	TRMT6	87	39.278	Colobus_angolensis_palliatus
ENSCSAVG00000001680	-	94	38.785	ENSCGRG00001003385	Trmt6	87	39.683	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001680	-	94	38.785	ENSCGRG00000006540	Trmt6	87	39.683	Cricetulus_griseus_crigri
ENSCSAVG00000001680	-	97	40.515	ENSCSEG00000002228	trmt6	90	40.460	Cynoglossus_semilaevis
ENSCSAVG00000001680	-	94	36.603	ENSCVAG00000000341	trmt6	90	37.355	Cyprinodon_variegatus
ENSCSAVG00000001680	-	95	39.151	ENSDARG00000042344	trmt6	90	39.817	Danio_rerio
ENSCSAVG00000001680	-	94	38.584	ENSDNOG00000012785	TRMT6	87	39.246	Dasypus_novemcinctus
ENSCSAVG00000001680	-	94	39.535	ENSDORG00000006458	Trmt6	88	40.181	Dipodomys_ordii
ENSCSAVG00000001680	-	82	30.871	FBgn0031832	CG9596	78	30.871	Drosophila_melanogaster
ENSCSAVG00000001680	-	94	40.436	ENSEASG00005001411	TRMT6	90	41.080	Equus_asinus_asinus
ENSCSAVG00000001680	-	94	38.372	ENSECAG00000023914	TRMT6	87	39.052	Equus_caballus
ENSCSAVG00000001680	-	94	37.296	ENSEEUG00000006635	TRMT6	87	38.462	Erinaceus_europaeus
ENSCSAVG00000001680	-	94	41.844	ENSELUG00000013378	trmt6	76	42.431	Esox_lucius
ENSCSAVG00000001680	-	94	39.211	ENSFCAG00000003102	TRMT6	87	39.865	Felis_catus
ENSCSAVG00000001680	-	90	37.408	ENSFALG00000013575	TRMT6	92	40.654	Ficedula_albicollis
ENSCSAVG00000001680	-	94	38.462	ENSFDAG00000015117	TRMT6	87	39.140	Fukomys_damarensis
ENSCSAVG00000001680	-	94	38.298	ENSFHEG00000019957	trmt6	91	38.549	Fundulus_heteroclitus
ENSCSAVG00000001680	-	96	39.618	ENSGMOG00000011059	trmt6	92	40.278	Gadus_morhua
ENSCSAVG00000001680	-	97	39.150	ENSGALG00000009169	TRMT6	90	39.509	Gallus_gallus
ENSCSAVG00000001680	-	94	37.292	ENSGAFG00000008618	trmt6	91	38.018	Gambusia_affinis
ENSCSAVG00000001680	-	94	40.488	ENSGACG00000012471	trmt6	90	41.043	Gasterosteus_aculeatus
ENSCSAVG00000001680	-	94	37.705	ENSGAGG00000008464	TRMT6	92	37.500	Gopherus_agassizii
ENSCSAVG00000001680	-	94	38.372	ENSGGOG00000008597	TRMT6	87	39.052	Gorilla_gorilla
ENSCSAVG00000001680	-	94	38.228	ENSHBUG00000016631	trmt6	90	38.914	Haplochromis_burtoni
ENSCSAVG00000001680	-	94	39.302	ENSHGLG00000015405	TRMT6	87	39.955	Heterocephalus_glaber_female
ENSCSAVG00000001680	-	94	39.302	ENSHGLG00100004120	TRMT6	87	39.955	Heterocephalus_glaber_male
ENSCSAVG00000001680	-	94	39.320	ENSHCOG00000000118	trmt6	89	40.281	Hippocampus_comes
ENSCSAVG00000001680	-	95	39.048	ENSIPUG00000019365	trmt6	92	39.723	Ictalurus_punctatus
ENSCSAVG00000001680	-	96	38.235	ENSSTOG00000006863	TRMT6	87	39.683	Ictidomys_tridecemlineatus
ENSCSAVG00000001680	-	94	38.318	ENSJJAG00000007315	Trmt6	87	40.136	Jaculus_jaculus
ENSCSAVG00000001680	-	94	37.939	ENSKMAG00000001295	trmt6	91	39.318	Kryptolebias_marmoratus
ENSCSAVG00000001680	-	96	38.889	ENSLBEG00000025654	trmt6	90	38.889	Labrus_bergylta
ENSCSAVG00000001680	-	94	40.835	ENSLACG00000016478	TRMT6	89	41.441	Latimeria_chalumnae
ENSCSAVG00000001680	-	97	39.318	ENSLOCG00000016451	trmt6	93	39.956	Lepisosteus_oculatus
ENSCSAVG00000001680	-	94	38.140	ENSLAFG00000032216	TRMT6	87	38.826	Loxodonta_africana
ENSCSAVG00000001680	-	94	38.372	ENSMFAG00000044360	TRMT6	87	39.052	Macaca_fascicularis
ENSCSAVG00000001680	-	94	38.372	ENSMMUG00000013728	TRMT6	87	39.052	Macaca_mulatta
ENSCSAVG00000001680	-	94	38.372	ENSMNEG00000041831	TRMT6	87	39.052	Macaca_nemestrina
ENSCSAVG00000001680	-	94	38.372	ENSMLEG00000040762	TRMT6	87	39.052	Mandrillus_leucophaeus
ENSCSAVG00000001680	-	97	38.303	ENSMAMG00000012101	trmt6	94	39.866	Mastacembelus_armatus
ENSCSAVG00000001680	-	94	38.534	ENSMZEG00005010771	trmt6	90	39.220	Maylandia_zebra
ENSCSAVG00000001680	-	94	38.710	ENSMGAG00000007678	TRMT6	90	39.732	Meleagris_gallopavo
ENSCSAVG00000001680	-	94	38.551	ENSMAUG00000008719	Trmt6	87	39.229	Mesocricetus_auratus
ENSCSAVG00000001680	-	94	38.979	ENSMICG00000011626	TRMT6	87	39.640	Microcebus_murinus
ENSCSAVG00000001680	-	94	39.720	ENSMOCG00000022320	Trmt6	87	40.363	Microtus_ochrogaster
ENSCSAVG00000001680	-	97	39.858	ENSMMOG00000004412	trmt6	90	39.858	Mola_mola
ENSCSAVG00000001680	-	94	37.762	ENSMODG00000003784	TRMT6	88	38.462	Monodelphis_domestica
ENSCSAVG00000001680	-	94	38.200	ENSMALG00000018140	trmt6	89	38.915	Monopterus_albus
ENSCSAVG00000001680	-	94	38.837	MGP_CAROLIEiJ_G0024344	Trmt6	87	39.503	Mus_caroli
ENSCSAVG00000001680	-	94	39.675	ENSMUSG00000037376	Trmt6	87	40.315	Mus_musculus
ENSCSAVG00000001680	-	94	38.353	MGP_PahariEiJ_G0025789	Trmt6	87	39.041	Mus_pahari
ENSCSAVG00000001680	-	94	39.070	MGP_SPRETEiJ_G0025264	Trmt6	87	39.503	Mus_spretus
ENSCSAVG00000001680	-	91	37.232	ENSMPUG00000006317	TRMT6	88	37.650	Mustela_putorius_furo
ENSCSAVG00000001680	-	94	37.850	ENSMLUG00000006491	TRMT6	87	39.052	Myotis_lucifugus
ENSCSAVG00000001680	-	94	38.249	ENSNGAG00000015251	Trmt6	87	38.926	Nannospalax_galili
ENSCSAVG00000001680	-	94	38.257	ENSNBRG00000020261	trmt6	90	38.967	Neolamprologus_brichardi
ENSCSAVG00000001680	-	94	38.605	ENSNLEG00000013957	TRMT6	87	39.278	Nomascus_leucogenys
ENSCSAVG00000001680	-	88	36.765	ENSMEUG00000009179	TRMT6	95	36.829	Notamacropus_eugenii
ENSCSAVG00000001680	-	94	39.120	ENSOPRG00000008564	TRMT6	89	39.775	Ochotona_princeps
ENSCSAVG00000001680	-	94	38.940	ENSODEG00000005657	TRMT6	87	39.597	Octodon_degus
ENSCSAVG00000001680	-	94	39.716	ENSONIG00000000968	trmt6	90	40.367	Oreochromis_niloticus
ENSCSAVG00000001680	-	90	40.000	ENSOANG00000008403	-	93	40.654	Ornithorhynchus_anatinus
ENSCSAVG00000001680	-	94	38.173	ENSOCUG00000014669	TRMT6	87	38.864	Oryctolagus_cuniculus
ENSCSAVG00000001680	-	94	37.709	ENSORLG00000009862	trmt6	91	38.426	Oryzias_latipes
ENSCSAVG00000001680	-	94	37.470	ENSORLG00020001466	trmt6	91	38.194	Oryzias_latipes_hni
ENSCSAVG00000001680	-	94	37.116	ENSORLG00015015552	trmt6	91	38.194	Oryzias_latipes_hsok
ENSCSAVG00000001680	-	94	36.952	ENSOMEG00000019874	trmt6	90	39.019	Oryzias_melastigma
ENSCSAVG00000001680	-	94	37.819	ENSOGAG00000012950	TRMT6	87	38.739	Otolemur_garnettii
ENSCSAVG00000001680	-	94	38.515	ENSOARG00000017993	TRMT6	87	39.189	Ovis_aries
ENSCSAVG00000001680	-	94	38.051	ENSPPAG00000036809	TRMT6	87	38.964	Pan_paniscus
ENSCSAVG00000001680	-	94	38.140	ENSPPRG00000000424	TRMT6	87	38.826	Panthera_pardus
ENSCSAVG00000001680	-	94	38.140	ENSPTIG00000010629	TRMT6	87	38.826	Panthera_tigris_altaica
ENSCSAVG00000001680	-	94	38.605	ENSPTRG00000013231	TRMT6	88	38.514	Pan_troglodytes
ENSCSAVG00000001680	-	94	38.372	ENSPANG00000009284	TRMT6	87	39.052	Papio_anubis
ENSCSAVG00000001680	-	99	39.269	ENSPKIG00000003441	trmt6	92	39.269	Paramormyrops_kingsleyae
ENSCSAVG00000001680	-	94	36.916	ENSPSIG00000017048	TRMT6	90	37.868	Pelodiscus_sinensis
ENSCSAVG00000001680	-	94	39.036	ENSPMGG00000021074	trmt6	90	40.233	Periophthalmus_magnuspinnatus
ENSCSAVG00000001680	-	94	38.462	ENSPEMG00000023268	Trmt6	87	39.140	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001680	-	94	38.283	ENSPCIG00000001546	TRMT6	86	38.964	Phascolarctos_cinereus
ENSCSAVG00000001680	-	94	37.674	ENSPFOG00000003037	trmt6	91	38.341	Poecilia_formosa
ENSCSAVG00000001680	-	94	37.709	ENSPLAG00000005143	trmt6	91	38.426	Poecilia_latipinna
ENSCSAVG00000001680	-	94	37.709	ENSPMEG00000014875	trmt6	91	38.426	Poecilia_mexicana
ENSCSAVG00000001680	-	94	36.585	ENSPREG00000016227	trmt6	89	37.825	Poecilia_reticulata
ENSCSAVG00000001680	-	94	38.372	ENSPPYG00000010691	TRMT6	87	39.052	Pongo_abelii
ENSCSAVG00000001680	-	94	37.674	ENSPCAG00000012098	TRMT6	87	39.955	Procavia_capensis
ENSCSAVG00000001680	-	94	38.747	ENSPCOG00000020723	TRMT6	87	39.414	Propithecus_coquereli
ENSCSAVG00000001680	-	94	35.581	ENSPVAG00000007539	TRMT6	87	35.778	Pteropus_vampyrus
ENSCSAVG00000001680	-	94	39.903	ENSPNYG00000000918	trmt6	91	40.566	Pundamilia_nyererei
ENSCSAVG00000001680	-	95	38.228	ENSPNAG00000019279	trmt6	90	38.914	Pygocentrus_nattereri
ENSCSAVG00000001680	-	94	38.837	ENSRNOG00000021270	Trmt6	87	39.503	Rattus_norvegicus
ENSCSAVG00000001680	-	94	38.263	ENSRBIG00000031132	TRMT6	87	39.318	Rhinopithecus_bieti
ENSCSAVG00000001680	-	94	38.372	ENSRROG00000045329	TRMT6	87	39.052	Rhinopithecus_roxellana
ENSCSAVG00000001680	-	71	38.602	ENSSBOG00000019803	-	82	39.474	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001680	-	94	38.140	ENSSBOG00000033602	-	87	38.826	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001680	-	94	36.620	ENSSHAG00000010754	TRMT6	86	38.341	Sarcophilus_harrisii
ENSCSAVG00000001680	-	97	37.701	ENSSFOG00015008429	trmt6	90	37.701	Scleropages_formosus
ENSCSAVG00000001680	-	94	37.241	ENSSMAG00000005352	trmt6	90	39.261	Scophthalmus_maximus
ENSCSAVG00000001680	-	94	39.379	ENSSDUG00000008294	trmt6	90	40.741	Seriola_dumerili
ENSCSAVG00000001680	-	94	39.618	ENSSLDG00000002180	trmt6	90	40.509	Seriola_lalandi_dorsalis
ENSCSAVG00000001680	-	94	35.963	ENSSARG00000005487	TRMT6	87	36.712	Sorex_araneus
ENSCSAVG00000001680	-	97	38.182	ENSSPAG00000011628	trmt6	93	39.246	Stegastes_partitus
ENSCSAVG00000001680	-	94	38.051	ENSSSCG00000007046	TRMT6	63	38.739	Sus_scrofa
ENSCSAVG00000001680	-	94	36.977	ENSTGUG00000002195	TRMT6	90	40.000	Taeniopygia_guttata
ENSCSAVG00000001680	-	94	37.379	ENSTRUG00000007153	trmt6	89	38.118	Takifugu_rubripes
ENSCSAVG00000001680	-	97	38.322	ENSTNIG00000010726	TRMT6	90	38.322	Tetraodon_nigroviridis
ENSCSAVG00000001680	-	56	45.794	ENSTBEG00000016317	TRMT6	50	47.500	Tupaia_belangeri
ENSCSAVG00000001680	-	94	37.442	ENSTTRG00000012889	TRMT6	87	38.149	Tursiops_truncatus
ENSCSAVG00000001680	-	94	37.442	ENSUAMG00000008674	TRMT6	87	37.923	Ursus_americanus
ENSCSAVG00000001680	-	94	37.907	ENSUMAG00000004999	TRMT6	87	38.600	Ursus_maritimus
ENSCSAVG00000001680	-	94	38.235	ENSVPAG00000002371	TRMT6	87	38.901	Vicugna_pacos
ENSCSAVG00000001680	-	94	37.907	ENSVVUG00000023370	TRMT6	87	38.600	Vulpes_vulpes
ENSCSAVG00000001680	-	99	37.916	ENSXETG00000004501	trmt6	92	37.916	Xenopus_tropicalis
ENSCSAVG00000001680	-	94	36.098	ENSXCOG00000007761	trmt6	90	37.352	Xiphophorus_couchianus
ENSCSAVG00000001680	-	94	37.232	ENSXMAG00000008592	trmt6	91	37.963	Xiphophorus_maculatus