EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001681 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 12515 bases
Position: chrreftig_234:123744-136258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002822	Xpo1	PF08389.12	7.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002865	-	410	-	ENSCSAVP00000002821	98 (aa)	-	H2YBX3
ENSCSAVT00000002866	-	3118	-	ENSCSAVP00000002822	991 (aa)	-	H2YBX4

Gene Model

Click here to download ENSCSAVG00000001681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001681	-	99	45.106	ENSG00000184575	XPOT	100	45.000	Homo_sapiens
ENSCSAVG00000001681	-	99	43.219	ENSAPOG00000001362	xpot	98	43.219	Acanthochromis_polyacanthus
ENSCSAVG00000001681	-	99	44.904	ENSAMEG00000018109	XPOT	99	44.904	Ailuropoda_melanoleuca
ENSCSAVG00000001681	-	99	43.605	ENSACIG00000009016	xpot	100	43.605	Amphilophus_citrinellus
ENSCSAVG00000001681	-	99	43.016	ENSAOCG00000005711	xpot	98	43.016	Amphiprion_ocellaris
ENSCSAVG00000001681	-	99	43.117	ENSAPEG00000024660	XPOT	99	43.595	Amphiprion_percula
ENSCSAVG00000001681	-	58	43.380	ENSAPEG00000024714	xpot	98	43.380	Amphiprion_percula
ENSCSAVG00000001681	-	100	42.771	ENSATEG00000000675	xpot	99	42.771	Anabas_testudineus
ENSCSAVG00000001681	-	99	44.400	ENSAPLG00000008073	XPOT	99	44.400	Anas_platyrhynchos
ENSCSAVG00000001681	-	99	45.308	ENSACAG00000003154	XPOT	99	45.308	Anolis_carolinensis
ENSCSAVG00000001681	-	79	44.010	ENSANAG00000032778	-	92	44.010	Aotus_nancymaae
ENSCSAVG00000001681	-	94	43.972	ENSANAG00000029914	-	99	43.972	Aotus_nancymaae
ENSCSAVG00000001681	-	99	43.044	ENSACLG00000008404	xpot	98	43.044	Astatotilapia_calliptera
ENSCSAVG00000001681	-	100	43.373	ENSAMXG00000013542	xpot	99	43.373	Astyanax_mexicanus
ENSCSAVG00000001681	-	99	45.207	ENSBTAG00000026962	XPOT	99	45.207	Bos_taurus
ENSCSAVG00000001681	-	99	44.904	ENSCJAG00000014762	XPOT	94	44.904	Callithrix_jacchus
ENSCSAVG00000001681	-	99	45.262	ENSCAFG00000000352	XPOT	99	45.262	Canis_familiaris
ENSCSAVG00000001681	-	99	45.207	ENSCAFG00020019527	XPOT	99	45.207	Canis_lupus_dingo
ENSCSAVG00000001681	-	99	45.207	ENSCHIG00000018310	XPOT	99	45.207	Capra_hircus
ENSCSAVG00000001681	-	99	45.005	ENSTSYG00000008852	XPOT	99	45.005	Carlito_syrichta
ENSCSAVG00000001681	-	89	45.710	ENSCAPG00000001620	XPOT	95	46.087	Cavia_aperea
ENSCSAVG00000001681	-	100	44.689	ENSCPOG00000027042	XPOT	99	44.904	Cavia_porcellus
ENSCSAVG00000001681	-	87	41.509	ENSCCAG00000035803	XPOT	98	42.907	Cebus_capucinus
ENSCSAVG00000001681	-	82	39.490	ENSCATG00000039901	-	88	39.490	Cercocebus_atys
ENSCSAVG00000001681	-	99	45.106	ENSCATG00000037826	XPOT	99	45.106	Cercocebus_atys
ENSCSAVG00000001681	-	99	45.217	ENSCLAG00000011382	XPOT	99	45.217	Chinchilla_lanigera
ENSCSAVG00000001681	-	99	45.106	ENSCSAG00000004475	XPOT	99	45.106	Chlorocebus_sabaeus
ENSCSAVG00000001681	-	55	42.975	ENSCHOG00000000288	-	57	42.975	Choloepus_hoffmanni
ENSCSAVG00000001681	-	99	44.501	ENSCPBG00000001003	XPOT	99	44.501	Chrysemys_picta_bellii
ENSCSAVG00000001681	-	97	34.917	ENSCANG00000030844	-	99	35.434	Colobus_angolensis_palliatus
ENSCSAVG00000001681	-	99	45.005	ENSCANG00000033371	XPOT	99	45.005	Colobus_angolensis_palliatus
ENSCSAVG00000001681	-	99	45.060	ENSCGRG00001016835	Xpot	99	45.060	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001681	-	99	45.116	ENSCGRG00000000577	Xpot	99	45.116	Cricetulus_griseus_crigri
ENSCSAVG00000001681	-	100	43.373	ENSCSEG00000003973	xpot	99	43.373	Cynoglossus_semilaevis
ENSCSAVG00000001681	-	99	43.548	ENSCVAG00000020453	xpot	98	43.548	Cyprinodon_variegatus
ENSCSAVG00000001681	-	100	43.788	ENSDARG00000099652	xpot	99	43.788	Danio_rerio
ENSCSAVG00000001681	-	99	45.015	ENSDORG00000000259	Xpot	99	45.015	Dipodomys_ordii
ENSCSAVG00000001681	-	52	44.318	ENSETEG00000002981	-	53	44.318	Echinops_telfairi
ENSCSAVG00000001681	-	91	40.458	ENSEBUG00000007650	xpot	99	40.519	Eptatretus_burgeri
ENSCSAVG00000001681	-	99	45.207	ENSEASG00005007701	XPOT	97	45.207	Equus_asinus_asinus
ENSCSAVG00000001681	-	99	45.308	ENSECAG00000018336	XPOT	92	45.551	Equus_caballus
ENSCSAVG00000001681	-	84	47.841	ENSEEUG00000009700	XPOT	85	47.841	Erinaceus_europaeus
ENSCSAVG00000001681	-	75	38.983	ENSELUG00000009337	xpot	93	45.455	Esox_lucius
ENSCSAVG00000001681	-	99	45.106	ENSFCAG00000012360	XPOT	99	45.106	Felis_catus
ENSCSAVG00000001681	-	99	44.400	ENSFALG00000009938	XPOT	99	44.400	Ficedula_albicollis
ENSCSAVG00000001681	-	99	45.317	ENSFDAG00000012640	XPOT	99	45.317	Fukomys_damarensis
ENSCSAVG00000001681	-	83	44.422	ENSFHEG00000009648	xpot	99	44.422	Fundulus_heteroclitus
ENSCSAVG00000001681	-	82	44.526	ENSGMOG00000018888	xpot	85	44.526	Gadus_morhua
ENSCSAVG00000001681	-	99	44.501	ENSGALG00000009835	XPOT	99	44.501	Gallus_gallus
ENSCSAVG00000001681	-	99	43.001	ENSGAFG00000004150	xpot	98	43.001	Gambusia_affinis
ENSCSAVG00000001681	-	99	41.566	ENSGACG00000000589	xpot	99	41.566	Gasterosteus_aculeatus
ENSCSAVG00000001681	-	99	44.501	ENSGAGG00000022917	XPOT	99	44.501	Gopherus_agassizii
ENSCSAVG00000001681	-	99	45.106	ENSGGOG00000006089	XPOT	99	45.106	Gorilla_gorilla
ENSCSAVG00000001681	-	82	41.162	ENSGGOG00000027170	-	95	39.611	Gorilla_gorilla
ENSCSAVG00000001681	-	99	43.202	ENSHBUG00000020681	xpot	98	43.145	Haplochromis_burtoni
ENSCSAVG00000001681	-	99	45.145	ENSHGLG00000005833	XPOT	99	45.145	Heterocephalus_glaber_female
ENSCSAVG00000001681	-	99	45.217	ENSHGLG00100000810	XPOT	99	45.217	Heterocephalus_glaber_male
ENSCSAVG00000001681	-	99	42.583	ENSHCOG00000006415	xpot	99	42.583	Hippocampus_comes
ENSCSAVG00000001681	-	100	43.287	ENSIPUG00000015271	xpot	99	43.518	Ictalurus_punctatus
ENSCSAVG00000001681	-	99	44.904	ENSSTOG00000021805	XPOT	99	44.904	Ictidomys_tridecemlineatus
ENSCSAVG00000001681	-	99	39.797	ENSJJAG00000014767	-	99	39.898	Jaculus_jaculus
ENSCSAVG00000001681	-	100	44.289	ENSJJAG00000019671	-	99	44.289	Jaculus_jaculus
ENSCSAVG00000001681	-	95	43.869	ENSKMAG00000019126	xpot	99	43.869	Kryptolebias_marmoratus
ENSCSAVG00000001681	-	99	43.391	ENSLBEG00000000178	xpot	98	43.391	Labrus_bergylta
ENSCSAVG00000001681	-	99	43.058	ENSLACG00000014355	XPOT	99	42.958	Latimeria_chalumnae
ENSCSAVG00000001681	-	99	43.964	ENSLOCG00000016512	xpot	99	43.964	Lepisosteus_oculatus
ENSCSAVG00000001681	-	99	44.859	ENSLAFG00000009829	XPOT	99	44.859	Loxodonta_africana
ENSCSAVG00000001681	-	99	45.106	ENSMFAG00000032644	XPOT	99	45.106	Macaca_fascicularis
ENSCSAVG00000001681	-	97	38.272	ENSMFAG00000038180	-	98	38.272	Macaca_fascicularis
ENSCSAVG00000001681	-	94	37.473	ENSMMUG00000021196	-	98	37.901	Macaca_mulatta
ENSCSAVG00000001681	-	99	45.106	ENSMMUG00000007659	XPOT	99	45.106	Macaca_mulatta
ENSCSAVG00000001681	-	99	45.005	ENSMNEG00000033875	XPOT	99	45.005	Macaca_nemestrina
ENSCSAVG00000001681	-	97	36.111	ENSMNEG00000029730	-	98	36.111	Macaca_nemestrina
ENSCSAVG00000001681	-	99	43.421	ENSMLEG00000043977	XPOT	99	43.421	Mandrillus_leucophaeus
ENSCSAVG00000001681	-	99	43.117	ENSMAMG00000020690	xpot	98	43.117	Mastacembelus_armatus
ENSCSAVG00000001681	-	99	42.944	ENSMZEG00005018955	xpot	98	42.944	Maylandia_zebra
ENSCSAVG00000001681	-	99	44.400	ENSMGAG00000010208	XPOT	99	44.400	Meleagris_gallopavo
ENSCSAVG00000001681	-	99	44.512	ENSMAUG00000016836	Xpot	98	44.512	Mesocricetus_auratus
ENSCSAVG00000001681	-	99	45.207	ENSMICG00000012001	XPOT	99	45.207	Microcebus_murinus
ENSCSAVG00000001681	-	99	44.713	ENSMOCG00000014097	Xpot	99	44.713	Microtus_ochrogaster
ENSCSAVG00000001681	-	99	43.202	ENSMMOG00000005960	xpot	97	43.202	Mola_mola
ENSCSAVG00000001681	-	99	43.725	ENSMALG00000007523	xpot	99	43.621	Monopterus_albus
ENSCSAVG00000001681	-	99	44.904	MGP_CAROLIEiJ_G0015858	Xpot	99	44.904	Mus_caroli
ENSCSAVG00000001681	-	99	44.904	ENSMUSG00000034667	Xpot	99	44.904	Mus_musculus
ENSCSAVG00000001681	-	99	44.556	MGP_PahariEiJ_G0031228	Xpot	99	44.556	Mus_pahari
ENSCSAVG00000001681	-	99	43.448	MGP_SPRETEiJ_G0016683	Xpot	99	43.448	Mus_spretus
ENSCSAVG00000001681	-	99	45.207	ENSMPUG00000017529	XPOT	99	45.207	Mustela_putorius_furo
ENSCSAVG00000001681	-	99	45.207	ENSMLUG00000009664	XPOT	99	45.207	Myotis_lucifugus
ENSCSAVG00000001681	-	99	44.433	ENSNGAG00000020615	Xpot	99	44.433	Nannospalax_galili
ENSCSAVG00000001681	-	99	43.145	ENSNBRG00000017136	xpot	98	43.145	Neolamprologus_brichardi
ENSCSAVG00000001681	-	99	45.106	ENSNLEG00000017052	XPOT	99	45.106	Nomascus_leucogenys
ENSCSAVG00000001681	-	70	39.107	ENSMEUG00000016032	-	75	39.107	Notamacropus_eugenii
ENSCSAVG00000001681	-	70	61.429	ENSOPRG00000013079	XPOT	71	61.429	Ochotona_princeps
ENSCSAVG00000001681	-	99	45.317	ENSODEG00000004607	XPOT	99	45.317	Octodon_degus
ENSCSAVG00000001681	-	99	43.347	ENSONIG00000007471	xpot	98	43.347	Oreochromis_niloticus
ENSCSAVG00000001681	-	99	44.109	ENSOANG00000010932	XPOT	99	44.109	Ornithorhynchus_anatinus
ENSCSAVG00000001681	-	99	45.106	ENSOCUG00000012126	XPOT	95	45.106	Oryctolagus_cuniculus
ENSCSAVG00000001681	-	99	43.360	ENSORLG00000020105	xpot	98	43.246	Oryzias_latipes
ENSCSAVG00000001681	-	99	43.448	ENSORLG00020003770	xpot	98	43.448	Oryzias_latipes_hni
ENSCSAVG00000001681	-	99	42.699	ENSORLG00015003002	xpot	99	42.699	Oryzias_latipes_hsok
ENSCSAVG00000001681	-	99	42.843	ENSOMEG00000021300	xpot	99	42.843	Oryzias_melastigma
ENSCSAVG00000001681	-	99	41.733	ENSOGAG00000004952	XPOT	99	42.281	Otolemur_garnettii
ENSCSAVG00000001681	-	99	45.207	ENSOARG00000003504	XPOT	99	45.207	Ovis_aries
ENSCSAVG00000001681	-	82	39.467	ENSPPAG00000041601	-	95	38.032	Pan_paniscus
ENSCSAVG00000001681	-	90	36.680	ENSPPAG00000040981	-	95	36.680	Pan_paniscus
ENSCSAVG00000001681	-	99	45.106	ENSPPAG00000031361	XPOT	99	45.106	Pan_paniscus
ENSCSAVG00000001681	-	99	45.207	ENSPPRG00000005552	XPOT	99	45.207	Panthera_pardus
ENSCSAVG00000001681	-	99	45.207	ENSPTIG00000022072	XPOT	96	45.207	Panthera_tigris_altaica
ENSCSAVG00000001681	-	91	36.445	ENSPTRG00000046749	-	97	36.445	Pan_troglodytes
ENSCSAVG00000001681	-	91	36.317	ENSPTRG00000049416	-	97	36.317	Pan_troglodytes
ENSCSAVG00000001681	-	82	40.219	ENSPTRG00000045368	-	84	40.219	Pan_troglodytes
ENSCSAVG00000001681	-	99	45.106	ENSPTRG00000005173	XPOT	99	45.106	Pan_troglodytes
ENSCSAVG00000001681	-	99	45.106	ENSPANG00000001024	-	99	45.106	Papio_anubis
ENSCSAVG00000001681	-	99	44.299	ENSPANG00000030915	-	99	44.299	Papio_anubis
ENSCSAVG00000001681	-	99	43.838	ENSPKIG00000001935	xpot	99	43.939	Paramormyrops_kingsleyae
ENSCSAVG00000001681	-	99	44.299	ENSPSIG00000007346	XPOT	99	44.299	Pelodiscus_sinensis
ENSCSAVG00000001681	-	58	42.882	ENSPMGG00000016668	xpot	91	42.882	Periophthalmus_magnuspinnatus
ENSCSAVG00000001681	-	99	45.354	ENSPEMG00000002538	Xpot	99	45.354	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001681	-	99	44.803	ENSPCIG00000029686	XPOT	99	44.803	Phascolarctos_cinereus
ENSCSAVG00000001681	-	99	43.044	ENSPFOG00000002834	xpot	98	43.044	Poecilia_formosa
ENSCSAVG00000001681	-	99	43.044	ENSPLAG00000017684	xpot	98	43.044	Poecilia_latipinna
ENSCSAVG00000001681	-	99	43.044	ENSPMEG00000006259	xpot	98	43.044	Poecilia_mexicana
ENSCSAVG00000001681	-	99	42.385	ENSPREG00000018505	xpot	99	42.385	Poecilia_reticulata
ENSCSAVG00000001681	-	99	45.005	ENSPPYG00000004727	XPOT	99	45.005	Pongo_abelii
ENSCSAVG00000001681	-	86	41.520	ENSPCAG00000001574	XPOT	87	41.520	Procavia_capensis
ENSCSAVG00000001681	-	99	45.106	ENSPCOG00000028383	XPOT	99	45.106	Propithecus_coquereli
ENSCSAVG00000001681	-	99	45.106	ENSPVAG00000008199	XPOT	99	45.106	Pteropus_vampyrus
ENSCSAVG00000001681	-	99	43.145	ENSPNYG00000022747	xpot	98	43.145	Pundamilia_nyererei
ENSCSAVG00000001681	-	99	43.522	ENSPNAG00000009140	xpot	98	43.522	Pygocentrus_nattereri
ENSCSAVG00000001681	-	70	43.101	ENSRNOG00000007088	Xpot	92	43.101	Rattus_norvegicus
ENSCSAVG00000001681	-	97	38.414	ENSRBIG00000032079	-	98	38.414	Rhinopithecus_bieti
ENSCSAVG00000001681	-	99	45.106	ENSRBIG00000041353	XPOT	99	45.106	Rhinopithecus_bieti
ENSCSAVG00000001681	-	99	45.106	ENSRROG00000038276	XPOT	99	45.106	Rhinopithecus_roxellana
ENSCSAVG00000001681	-	99	45.005	ENSSBOG00000024782	XPOT	99	45.005	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001681	-	99	44.400	ENSSHAG00000007043	XPOT	99	44.400	Sarcophilus_harrisii
ENSCSAVG00000001681	-	99	43.649	ENSSFOG00015000827	xpot	99	43.907	Scleropages_formosus
ENSCSAVG00000001681	-	99	42.626	ENSSMAG00000005164	xpot	98	42.626	Scophthalmus_maximus
ENSCSAVG00000001681	-	99	43.117	ENSSDUG00000012514	xpot	98	43.117	Seriola_dumerili
ENSCSAVG00000001681	-	99	43.016	ENSSLDG00000019497	xpot	98	43.016	Seriola_lalandi_dorsalis
ENSCSAVG00000001681	-	67	48.462	ENSSARG00000005789	XPOT	71	48.462	Sorex_araneus
ENSCSAVG00000001681	-	99	44.100	ENSSPUG00000009837	XPOT	99	44.100	Sphenodon_punctatus
ENSCSAVG00000001681	-	99	45.207	ENSSSCG00000000466	XPOT	99	45.207	Sus_scrofa
ENSCSAVG00000001681	-	99	44.299	ENSTGUG00000006459	XPOT	99	44.547	Taeniopygia_guttata
ENSCSAVG00000001681	-	99	43.173	ENSTNIG00000002483	xpot	99	43.173	Tetraodon_nigroviridis
ENSCSAVG00000001681	-	88	46.970	ENSTBEG00000009738	XPOT	89	46.970	Tupaia_belangeri
ENSCSAVG00000001681	-	99	45.207	ENSTTRG00000016808	XPOT	99	45.207	Tursiops_truncatus
ENSCSAVG00000001681	-	99	45.207	ENSUAMG00000017168	XPOT	99	45.207	Ursus_americanus
ENSCSAVG00000001681	-	99	45.207	ENSUMAG00000020382	XPOT	99	45.207	Ursus_maritimus
ENSCSAVG00000001681	-	99	44.747	ENSVPAG00000004244	XPOT	100	44.747	Vicugna_pacos
ENSCSAVG00000001681	-	99	45.207	ENSVVUG00000015001	XPOT	99	45.207	Vulpes_vulpes
ENSCSAVG00000001681	-	99	42.915	ENSXETG00000021668	xpot	99	42.915	Xenopus_tropicalis
ENSCSAVG00000001681	-	99	42.485	ENSXCOG00000011945	xpot	99	42.485	Xiphophorus_couchianus
ENSCSAVG00000001681	-	99	43.044	ENSXMAG00000002827	xpot	98	43.044	Xiphophorus_maculatus