EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001710 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 16334 bases
Position: chrreftig_107:178507-194840
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002869	Methyltr_RsmB-F	PF01189.17	8.1e-40	1	1
ENSCSAVP00000002873	Methyltr_RsmB-F	PF01189.17	9.4e-40	1	1
ENSCSAVP00000002871	Methyltr_RsmB-F	PF01189.17	9.4e-40	1	1
ENSCSAVP00000002870	Methyltr_RsmB-F	PF01189.17	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000002914	-	2091	-	ENSCSAVP00000002870	677 (aa)	-	H2YC22
ENSCSAVT00000002915	-	1944	-	ENSCSAVP00000002871	648 (aa)	-	H2YC23
ENSCSAVT00000002916	-	1876	-	ENSCSAVP00000002872	521 (aa)	-	H2YC24
ENSCSAVT00000002917	-	2095	-	ENSCSAVP00000002873	640 (aa)	-	H2YC25
ENSCSAVT00000002913	-	1932	-	ENSCSAVP00000002869	613 (aa)	-	H2YC21

Gene Model

Click here to download ENSCSAVG00000001710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001710	-	98	46.559	ENSG00000037474	NSUN2	87	46.588	Homo_sapiens
ENSCSAVG00000001710	-	99	46.266	ENSAPOG00000000894	nsun2	84	46.861	Acanthochromis_polyacanthus
ENSCSAVG00000001710	-	99	45.685	ENSAMEG00000002744	NSUN2	87	46.439	Ailuropoda_melanoleuca
ENSCSAVG00000001710	-	99	45.991	ENSACIG00000013142	nsun2	89	46.407	Amphilophus_citrinellus
ENSCSAVG00000001710	-	99	45.827	ENSAOCG00000019227	nsun2	88	46.423	Amphiprion_ocellaris
ENSCSAVG00000001710	-	99	46.266	ENSAPEG00000002772	nsun2	88	46.861	Amphiprion_percula
ENSCSAVG00000001710	-	99	45.624	ENSATEG00000006961	nsun2	88	46.188	Anabas_testudineus
ENSCSAVG00000001710	-	97	45.045	ENSAPLG00000011518	NSUN2	87	45.920	Anas_platyrhynchos
ENSCSAVG00000001710	-	99	45.840	ENSACAG00000000677	NSUN2	82	46.767	Anolis_carolinensis
ENSCSAVG00000001710	-	98	46.706	ENSANAG00000034451	NSUN2	91	46.729	Aotus_nancymaae
ENSCSAVG00000001710	-	99	47.270	ENSACLG00000014258	nsun2	89	46.087	Astatotilapia_calliptera
ENSCSAVG00000001710	-	99	46.396	ENSAMXG00000017682	nsun2	91	47.709	Astyanax_mexicanus
ENSCSAVG00000001710	-	99	45.994	ENSBTAG00000015466	NSUN2	86	46.746	Bos_taurus
ENSCSAVG00000001710	-	99	40.128	WBGene00021686	Y48G8AL.5	88	38.794	Caenorhabditis_elegans
ENSCSAVG00000001710	-	98	46.491	ENSCJAG00000008689	NSUN2	62	46.709	Callithrix_jacchus
ENSCSAVG00000001710	-	99	45.152	ENSCAFG00000010334	NSUN2	86	45.697	Canis_familiaris
ENSCSAVG00000001710	-	95	44.946	ENSCAFG00020022862	NSUN2	90	45.723	Canis_lupus_dingo
ENSCSAVG00000001710	-	99	45.468	ENSCHIG00000019385	NSUN2	91	46.291	Capra_hircus
ENSCSAVG00000001710	-	99	45.481	ENSTSYG00000005709	NSUN2	89	46.188	Carlito_syrichta
ENSCSAVG00000001710	-	91	45.972	ENSCAPG00000013519	NSUN2	91	47.255	Cavia_aperea
ENSCSAVG00000001710	-	99	45.765	ENSCPOG00000008196	NSUN2	88	46.667	Cavia_porcellus
ENSCSAVG00000001710	-	83	46.691	ENSCCAG00000034245	-	89	45.913	Cebus_capucinus
ENSCSAVG00000001710	-	98	46.715	ENSCCAG00000025648	-	87	46.746	Cebus_capucinus
ENSCSAVG00000001710	-	98	46.930	ENSCATG00000045020	-	87	46.815	Cercocebus_atys
ENSCSAVG00000001710	-	99	45.840	ENSCATG00000042165	-	90	46.606	Cercocebus_atys
ENSCSAVG00000001710	-	99	43.620	ENSCLAG00000003188	NSUN2	92	46.417	Chinchilla_lanigera
ENSCSAVG00000001710	-	98	46.930	ENSCSAG00000017339	NSUN2	87	46.736	Chlorocebus_sabaeus
ENSCSAVG00000001710	-	64	48.970	ENSCHOG00000003644	NSUN2	76	48.970	Choloepus_hoffmanni
ENSCSAVG00000001710	-	100	44.940	ENSCPBG00000006615	NSUN2	88	46.345	Chrysemys_picta_bellii
ENSCSAVG00000001710	-	99	79.630	ENSCING00000009504	-	100	82.154	Ciona_intestinalis
ENSCSAVG00000001710	-	99	45.858	ENSCANG00000029527	NSUN2	90	46.736	Colobus_angolensis_palliatus
ENSCSAVG00000001710	-	99	45.522	ENSCGRG00001003947	Nsun2	89	46.577	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001710	-	99	45.522	ENSCGRG00000005703	Nsun2	92	46.577	Cricetulus_griseus_crigri
ENSCSAVG00000001710	-	95	46.900	ENSCVAG00000021836	nsun2	92	46.900	Cyprinodon_variegatus
ENSCSAVG00000001710	-	99	45.252	ENSDARG00000056665	nsun2	91	45.891	Danio_rerio
ENSCSAVG00000001710	-	95	46.202	ENSDNOG00000013848	NSUN2	93	47.196	Dasypus_novemcinctus
ENSCSAVG00000001710	-	99	46.450	ENSDORG00000010247	Nsun2	92	47.516	Dipodomys_ordii
ENSCSAVG00000001710	-	100	42.420	FBgn0026079	Nsun2	87	42.420	Drosophila_melanogaster
ENSCSAVG00000001710	-	99	40.000	ENSETEG00000000983	NSUN2	88	40.491	Echinops_telfairi
ENSCSAVG00000001710	-	99	40.593	ENSEBUG00000006751	nsun2	84	40.473	Eptatretus_burgeri
ENSCSAVG00000001710	-	99	45.685	ENSEASG00005018580	NSUN2	88	46.439	Equus_asinus_asinus
ENSCSAVG00000001710	-	99	45.685	ENSECAG00000016357	NSUN2	88	46.439	Equus_caballus
ENSCSAVG00000001710	-	69	44.211	ENSEEUG00000001691	NSUN2	98	44.211	Erinaceus_europaeus
ENSCSAVG00000001710	-	99	45.982	ENSELUG00000024082	nsun2	87	46.884	Esox_lucius
ENSCSAVG00000001710	-	99	46.747	ENSFCAG00000015602	NSUN2	88	47.511	Felis_catus
ENSCSAVG00000001710	-	99	44.328	ENSFALG00000007188	NSUN2	86	45.401	Ficedula_albicollis
ENSCSAVG00000001710	-	99	46.293	ENSFDAG00000003589	NSUN2	94	46.293	Fukomys_damarensis
ENSCSAVG00000001710	-	99	45.575	ENSFHEG00000017930	nsun2	89	46.618	Fundulus_heteroclitus
ENSCSAVG00000001710	-	72	44.783	ENSGMOG00000008921	nsun2	99	47.046	Gadus_morhua
ENSCSAVG00000001710	-	99	45.852	ENSGALG00000013064	NSUN2	84	46.567	Gallus_gallus
ENSCSAVG00000001710	-	99	46.429	ENSGAFG00000018743	nsun2	89	47.329	Gambusia_affinis
ENSCSAVG00000001710	-	95	45.469	ENSGACG00000008974	nsun2	99	46.615	Gasterosteus_aculeatus
ENSCSAVG00000001710	-	100	46.779	ENSGAGG00000015773	NSUN2	92	47.612	Gopherus_agassizii
ENSCSAVG00000001710	-	98	46.706	ENSGGOG00000016583	NSUN2	87	46.736	Gorilla_gorilla
ENSCSAVG00000001710	-	99	45.776	ENSHBUG00000022199	nsun2	89	46.087	Haplochromis_burtoni
ENSCSAVG00000001710	-	99	44.940	ENSHGLG00000013825	NSUN2	89	45.846	Heterocephalus_glaber_female
ENSCSAVG00000001710	-	99	44.741	ENSHGLG00100013746	NSUN2	99	45.630	Heterocephalus_glaber_male
ENSCSAVG00000001710	-	99	45.950	ENSHCOG00000020484	nsun2	88	46.903	Hippocampus_comes
ENSCSAVG00000001710	-	100	45.441	ENSIPUG00000014849	nsun2	87	47.826	Ictalurus_punctatus
ENSCSAVG00000001710	-	99	46.074	ENSSTOG00000004090	NSUN2	88	47.033	Ictidomys_tridecemlineatus
ENSCSAVG00000001710	-	99	46.429	ENSJJAG00000013996	Nsun2	89	46.981	Jaculus_jaculus
ENSCSAVG00000001710	-	99	47.933	ENSKMAG00000000810	nsun2	90	46.277	Kryptolebias_marmoratus
ENSCSAVG00000001710	-	99	44.934	ENSLBEG00000025697	nsun2	88	46.912	Labrus_bergylta
ENSCSAVG00000001710	-	99	45.758	ENSLOCG00000008755	nsun2	87	46.526	Lepisosteus_oculatus
ENSCSAVG00000001710	-	99	46.439	ENSLAFG00000009411	NSUN2	93	46.893	Loxodonta_africana
ENSCSAVG00000001710	-	98	46.930	ENSMFAG00000045240	NSUN2	87	46.963	Macaca_fascicularis
ENSCSAVG00000001710	-	98	46.930	ENSMMUG00000002561	NSUN2	87	46.963	Macaca_mulatta
ENSCSAVG00000001710	-	98	46.930	ENSMNEG00000033485	NSUN2	87	46.963	Macaca_nemestrina
ENSCSAVG00000001710	-	98	46.930	ENSMLEG00000017173	NSUN2	91	46.963	Mandrillus_leucophaeus
ENSCSAVG00000001710	-	99	45.748	ENSMAMG00000004850	nsun2	89	46.009	Mastacembelus_armatus
ENSCSAVG00000001710	-	99	45.534	ENSMZEG00005000101	nsun2	89	46.087	Maylandia_zebra
ENSCSAVG00000001710	-	100	44.952	ENSMGAG00000006349	NSUN2	88	46.131	Meleagris_gallopavo
ENSCSAVG00000001710	-	99	46.051	ENSMAUG00000014207	Nsun2	89	47.103	Mesocricetus_auratus
ENSCSAVG00000001710	-	99	46.006	ENSMICG00000016549	NSUN2	83	47.111	Microcebus_murinus
ENSCSAVG00000001710	-	99	47.104	ENSMOCG00000009613	Nsun2	89	47.598	Microtus_ochrogaster
ENSCSAVG00000001710	-	99	46.370	ENSMMOG00000021188	nsun2	89	47.710	Mola_mola
ENSCSAVG00000001710	-	100	53.302	ENSMODG00000002039	NSUN2	78	53.318	Monodelphis_domestica
ENSCSAVG00000001710	-	99	49.600	ENSMALG00000002740	nsun2	89	49.841	Monopterus_albus
ENSCSAVG00000001710	-	99	46.051	MGP_CAROLIEiJ_G0018690	Nsun2	88	46.954	Mus_caroli
ENSCSAVG00000001710	-	99	46.200	ENSMUSG00000021595	Nsun2	92	47.040	Mus_musculus
ENSCSAVG00000001710	-	99	46.051	MGP_PahariEiJ_G0015771	Nsun2	92	46.885	Mus_pahari
ENSCSAVG00000001710	-	99	46.349	MGP_SPRETEiJ_G0019574	Nsun2	92	47.196	Mus_spretus
ENSCSAVG00000001710	-	95	46.106	ENSMPUG00000007561	NSUN2	89	46.885	Mustela_putorius_furo
ENSCSAVG00000001710	-	99	45.238	ENSMLUG00000009609	NSUN2	88	45.994	Myotis_lucifugus
ENSCSAVG00000001710	-	98	46.843	ENSNGAG00000007424	Nsun2	89	46.875	Nannospalax_galili
ENSCSAVG00000001710	-	98	46.706	ENSNLEG00000011344	NSUN2	87	46.736	Nomascus_leucogenys
ENSCSAVG00000001710	-	90	45.024	ENSOPRG00000011324	NSUN2	92	46.610	Ochotona_princeps
ENSCSAVG00000001710	-	99	45.765	ENSODEG00000018305	NSUN2	98	45.037	Octodon_degus
ENSCSAVG00000001710	-	99	46.188	ENSONIG00000007761	nsun2	89	46.087	Oreochromis_niloticus
ENSCSAVG00000001710	-	99	43.367	ENSOANG00000009243	NSUN2	88	45.053	Ornithorhynchus_anatinus
ENSCSAVG00000001710	-	93	45.511	ENSOCUG00000007918	NSUN2	91	46.895	Oryctolagus_cuniculus
ENSCSAVG00000001710	-	100	47.139	ENSORLG00000014332	nsun2	88	47.500	Oryzias_latipes
ENSCSAVG00000001710	-	99	47.640	ENSORLG00020019799	nsun2	89	47.353	Oryzias_latipes_hni
ENSCSAVG00000001710	-	99	47.788	ENSORLG00015007992	nsun2	91	47.458	Oryzias_latipes_hsok
ENSCSAVG00000001710	-	99	46.908	ENSOMEG00000013504	nsun2	89	47.218	Oryzias_melastigma
ENSCSAVG00000001710	-	99	45.588	ENSOGAG00000015015	NSUN2	87	46.686	Otolemur_garnettii
ENSCSAVG00000001710	-	99	45.199	ENSOARG00000015042	NSUN2	87	45.693	Ovis_aries
ENSCSAVG00000001710	-	98	46.930	ENSPPAG00000036124	NSUN2	87	46.736	Pan_paniscus
ENSCSAVG00000001710	-	99	46.677	ENSPPRG00000001946	NSUN2	88	47.440	Panthera_pardus
ENSCSAVG00000001710	-	99	44.749	ENSPTIG00000013257	NSUN2	95	44.760	Panthera_tigris_altaica
ENSCSAVG00000001710	-	98	46.559	ENSPTRG00000016715	NSUN2	87	46.588	Pan_troglodytes
ENSCSAVG00000001710	-	98	46.930	ENSPANG00000004215	NSUN2	87	46.815	Papio_anubis
ENSCSAVG00000001710	-	99	48.661	ENSPKIG00000024200	nsun2	88	49.377	Paramormyrops_kingsleyae
ENSCSAVG00000001710	-	98	43.935	ENSPSIG00000015282	NSUN2	87	45.628	Pelodiscus_sinensis
ENSCSAVG00000001710	-	99	42.496	ENSPMGG00000004138	nsun2	90	42.730	Periophthalmus_magnuspinnatus
ENSCSAVG00000001710	-	99	46.051	ENSPEMG00000021790	Nsun2	89	47.103	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001710	-	100	45.183	ENSPCIG00000011853	NSUN2	85	46.334	Phascolarctos_cinereus
ENSCSAVG00000001710	-	99	46.429	ENSPFOG00000004139	nsun2	89	47.181	Poecilia_formosa
ENSCSAVG00000001710	-	99	46.726	ENSPLAG00000007091	nsun2	92	47.278	Poecilia_latipinna
ENSCSAVG00000001710	-	99	46.577	ENSPMEG00000000122	nsun2	89	47.329	Poecilia_mexicana
ENSCSAVG00000001710	-	99	47.305	ENSPREG00000017479	nsun2	89	48.060	Poecilia_reticulata
ENSCSAVG00000001710	-	98	46.559	ENSPPYG00000015332	NSUN2	88	46.041	Pongo_abelii
ENSCSAVG00000001710	-	80	47.458	ENSPCAG00000010931	NSUN2	73	47.500	Procavia_capensis
ENSCSAVG00000001710	-	99	43.047	ENSPCOG00000012979	NSUN2	87	44.148	Propithecus_coquereli
ENSCSAVG00000001710	-	99	45.089	ENSPVAG00000010643	NSUN2	90	45.846	Pteropus_vampyrus
ENSCSAVG00000001710	-	99	46.512	ENSPNYG00000010677	nsun2	89	46.087	Pundamilia_nyererei
ENSCSAVG00000001710	-	99	43.101	ENSPNAG00000006827	nsun2	89	43.313	Pygocentrus_nattereri
ENSCSAVG00000001710	-	99	46.200	ENSRNOG00000017254	Nsun2	86	46.954	Rattus_norvegicus
ENSCSAVG00000001710	-	98	46.930	ENSRBIG00000035794	NSUN2	87	46.736	Rhinopithecus_bieti
ENSCSAVG00000001710	-	98	46.930	ENSRROG00000035277	NSUN2	87	46.736	Rhinopithecus_roxellana
ENSCSAVG00000001710	-	93	41.440	YBL024W	NCL1	88	41.440	Saccharomyces_cerevisiae
ENSCSAVG00000001710	-	98	46.715	ENSSBOG00000035262	NSUN2	87	46.746	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001710	-	99	45.601	ENSSHAG00000011056	NSUN2	94	46.345	Sarcophilus_harrisii
ENSCSAVG00000001710	-	99	46.401	ENSSFOG00015001631	nsun2	86	46.401	Scleropages_formosus
ENSCSAVG00000001710	-	99	45.748	ENSSMAG00000020669	nsun2	89	46.569	Scophthalmus_maximus
ENSCSAVG00000001710	-	99	45.870	ENSSDUG00000002080	nsun2	88	46.765	Seriola_dumerili
ENSCSAVG00000001710	-	99	46.508	ENSSLDG00000004496	nsun2	88	47.485	Seriola_lalandi_dorsalis
ENSCSAVG00000001710	-	100	46.809	ENSSPUG00000008865	NSUN2	84	46.809	Sphenodon_punctatus
ENSCSAVG00000001710	-	99	45.974	ENSSPAG00000003665	nsun2	88	47.153	Stegastes_partitus
ENSCSAVG00000001710	-	99	45.387	ENSSSCG00000017104	NSUN2	84	46.142	Sus_scrofa
ENSCSAVG00000001710	-	99	44.978	ENSTGUG00000007789	NSUN2	99	46.039	Taeniopygia_guttata
ENSCSAVG00000001710	-	99	46.418	ENSTRUG00000011788	nsun2	89	46.852	Takifugu_rubripes
ENSCSAVG00000001710	-	99	46.165	ENSTNIG00000009258	nsun2	93	46.930	Tetraodon_nigroviridis
ENSCSAVG00000001710	-	100	41.233	ENSTBEG00000014695	NSUN2	91	42.348	Tupaia_belangeri
ENSCSAVG00000001710	-	99	43.155	ENSTTRG00000012662	NSUN2	88	43.917	Tursiops_truncatus
ENSCSAVG00000001710	-	99	46.617	ENSUAMG00000024741	NSUN2	84	53.933	Ursus_americanus
ENSCSAVG00000001710	-	99	43.125	ENSUMAG00000021149	NSUN2	90	46.739	Ursus_maritimus
ENSCSAVG00000001710	-	53	56.839	ENSVPAG00000005110	-	66	56.839	Vicugna_pacos
ENSCSAVG00000001710	-	95	44.946	ENSVVUG00000017691	NSUN2	90	45.723	Vulpes_vulpes
ENSCSAVG00000001710	-	99	44.792	ENSXETG00000001732	nsun2	85	44.640	Xenopus_tropicalis
ENSCSAVG00000001710	-	99	46.837	ENSXCOG00000002584	nsun2	89	47.748	Xiphophorus_couchianus
ENSCSAVG00000001710	-	99	46.429	ENSXMAG00000013597	nsun2	89	47.400	Xiphophorus_maculatus