EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001775 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2128 bases
Position: chrreftig_143:462832-464959
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000002972	2OG-FeII_Oxy	PF03171.20	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003017	-	561	-	ENSCSAVP00000002972	170 (aa)	-	H2YCC4

Gene Model

Click here to download ENSCSAVG00000001775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001775	-	96	45.732	ENSCSAVG00000000201	-	94	45.890
ENSCSAVG00000001775	-	100	55.233	ENSCSAVG00000004616	-	53	55.233
ENSCSAVG00000001775	-	99	39.080	ENSCSAVG00000004871	-	90	39.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001775	-	96	37.576	ENSAPOG00000011678	si:dkey-10o6.2	54	37.576	Acanthochromis_polyacanthus
ENSCSAVG00000001775	-	97	36.145	ENSACIG00000011675	-	50	36.145	Amphilophus_citrinellus
ENSCSAVG00000001775	-	97	42.169	ENSATEG00000021945	si:dkey-10o6.2	50	42.169	Anabas_testudineus
ENSCSAVG00000001775	-	97	41.566	ENSATEG00000021952	si:dkey-10o6.2	50	41.566	Anabas_testudineus
ENSCSAVG00000001775	-	97	42.262	ENSATEG00000000030	si:dkey-10o6.2	50	42.262	Anabas_testudineus
ENSCSAVG00000001775	-	97	39.157	ENSACLG00000023011	si:dkey-10o6.2	50	39.157	Astatotilapia_calliptera
ENSCSAVG00000001775	-	100	68.824	ENSCING00000016920	-	50	68.824	Ciona_intestinalis
ENSCSAVG00000001775	-	96	50.000	ENSCING00000022311	-	51	50.000	Ciona_intestinalis
ENSCSAVG00000001775	-	99	38.636	ENSCING00000007255	-	54	38.636	Ciona_intestinalis
ENSCSAVG00000001775	-	99	44.970	ENSCING00000012500	-	52	44.970	Ciona_intestinalis
ENSCSAVG00000001775	-	97	37.349	ENSCSEG00000000927	si:dkey-10o6.2	50	37.349	Cynoglossus_semilaevis
ENSCSAVG00000001775	-	97	40.361	ENSCVAG00000015074	si:dkey-10o6.2	50	40.361	Cyprinodon_variegatus
ENSCSAVG00000001775	-	95	33.918	FBgn0053099	CG33099	50	33.918	Drosophila_melanogaster
ENSCSAVG00000001775	-	96	39.634	ENSELUG00000003488	si:dkey-10o6.2	50	39.634	Esox_lucius
ENSCSAVG00000001775	-	96	39.394	ENSFHEG00000019035	si:dkey-10o6.2	50	39.394	Fundulus_heteroclitus
ENSCSAVG00000001775	-	97	39.759	ENSGAFG00000006137	si:dkey-10o6.2	50	39.759	Gambusia_affinis
ENSCSAVG00000001775	-	97	39.157	ENSHBUG00000008853	si:dkey-10o6.2	50	39.157	Haplochromis_burtoni
ENSCSAVG00000001775	-	97	38.922	ENSMAMG00000023022	si:dkey-10o6.2	50	38.922	Mastacembelus_armatus
ENSCSAVG00000001775	-	97	38.922	ENSMAMG00000023020	si:dkey-10o6.2	50	38.922	Mastacembelus_armatus
ENSCSAVG00000001775	-	97	37.952	ENSMAMG00000023026	-	50	37.952	Mastacembelus_armatus
ENSCSAVG00000001775	-	97	36.747	ENSMAMG00000023025	-	50	36.747	Mastacembelus_armatus
ENSCSAVG00000001775	-	97	39.759	ENSMZEG00005012018	si:dkey-10o6.2	50	39.759	Maylandia_zebra
ENSCSAVG00000001775	-	97	37.952	ENSONIG00000015572	si:dkey-10o6.2	50	37.952	Oreochromis_niloticus
ENSCSAVG00000001775	-	77	39.394	ENSORLG00015016590	-	63	39.394	Oryzias_latipes_hsok
ENSCSAVG00000001775	-	97	39.759	ENSPKIG00000024109	-	60	39.759	Paramormyrops_kingsleyae
ENSCSAVG00000001775	-	96	37.195	ENSPMGG00000021603	si:dkey-10o6.2	50	37.195	Periophthalmus_magnuspinnatus
ENSCSAVG00000001775	-	97	39.759	ENSPLAG00000008037	si:dkey-10o6.2	50	39.759	Poecilia_latipinna
ENSCSAVG00000001775	-	97	40.361	ENSPMEG00000020748	si:dkey-10o6.2	70	40.361	Poecilia_mexicana
ENSCSAVG00000001775	-	96	40.854	ENSPREG00000005108	si:dkey-10o6.2	50	40.854	Poecilia_reticulata
ENSCSAVG00000001775	-	97	39.157	ENSPNYG00000010698	si:dkey-10o6.2	50	39.157	Pundamilia_nyererei
ENSCSAVG00000001775	-	97	36.747	ENSSMAG00000019016	si:dkey-10o6.2	50	36.747	Scophthalmus_maximus
ENSCSAVG00000001775	-	97	38.554	ENSSDUG00000000943	si:dkey-10o6.2	50	38.554	Seriola_dumerili
ENSCSAVG00000001775	-	97	38.554	ENSSLDG00000003462	si:dkey-10o6.2	50	38.554	Seriola_lalandi_dorsalis
ENSCSAVG00000001775	-	98	37.725	ENSTRUG00000019532	si:dkey-10o6.2	50	37.725	Takifugu_rubripes
ENSCSAVG00000001775	-	97	39.157	ENSXCOG00000000855	si:dkey-10o6.2	50	39.157	Xiphophorus_couchianus
ENSCSAVG00000001775	-	97	39.157	ENSXMAG00000012432	si:dkey-10o6.2	50	39.157	Xiphophorus_maculatus