EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000001808 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1047 bases
Position: chrreftig_12:624180-625226
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	1	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	2	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	3	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	4	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	5	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	6	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	7	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	8	9
ENSCSAVP00000003048	zf-C2H2	PF00096.26	1.9e-51	9	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	1	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	2	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	3	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	4	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	5	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	6	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	7	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	8	9
ENSCSAVP00000003048	zf-met	PF12874.7	9.4e-39	9	9

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003093	-	957	-	ENSCSAVP00000003048	319 (aa)	-	H2YCK0

Gene Model

Click here to download ENSCSAVG00000001808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000001808	-	100	32.743	ENSCSAVG00000006745	-	98	32.515
ENSCSAVG00000001808	-	97	40.323	ENSCSAVG00000011749	-	82	40.323
ENSCSAVG00000001808	-	100	57.317	ENSCSAVG00000003690	-	96	57.317
ENSCSAVG00000001808	-	100	53.731	ENSCSAVG00000009574	-	99	53.731
ENSCSAVG00000001808	-	100	58.286	ENSCSAVG00000000649	-	99	58.286
ENSCSAVG00000001808	-	100	62.500	ENSCSAVG00000009953	-	97	62.500
ENSCSAVG00000001808	-	100	63.438	ENSCSAVG00000004499	-	100	63.438
ENSCSAVG00000001808	-	100	59.843	ENSCSAVG00000000642	-	100	59.843
ENSCSAVG00000001808	-	100	40.964	ENSCSAVG00000005904	-	96	40.964
ENSCSAVG00000001808	-	100	51.707	ENSCSAVG00000004678	-	99	51.707
ENSCSAVG00000001808	-	99	35.165	ENSCSAVG00000009819	-	77	35.165
ENSCSAVG00000001808	-	100	38.372	ENSCSAVG00000006650	-	99	38.372
ENSCSAVG00000001808	-	99	32.308	ENSCSAVG00000005896	-	68	32.308
ENSCSAVG00000001808	-	100	64.384	ENSCSAVG00000004762	-	100	64.384
ENSCSAVG00000001808	-	83	38.000	ENSCSAVG00000006755	-	96	38.000
ENSCSAVG00000001808	-	99	41.489	ENSCSAVG00000006028	-	64	41.489
ENSCSAVG00000001808	-	100	59.006	ENSCSAVG00000001834	-	100	59.006
ENSCSAVG00000001808	-	100	62.609	ENSCSAVG00000001830	-	100	62.609
ENSCSAVG00000001808	-	100	52.381	ENSCSAVG00000003895	-	100	52.381
ENSCSAVG00000001808	-	100	59.813	ENSCSAVG00000007918	-	100	59.813
ENSCSAVG00000001808	-	100	59.406	ENSCSAVG00000000690	-	99	59.406
ENSCSAVG00000001808	-	100	66.000	ENSCSAVG00000008862	-	99	65.823
ENSCSAVG00000001808	-	100	55.590	ENSCSAVG00000000673	-	100	55.590
ENSCSAVG00000001808	-	100	59.322	ENSCSAVG00000006141	-	100	56.075
ENSCSAVG00000001808	-	100	56.250	ENSCSAVG00000006608	-	99	56.250
ENSCSAVG00000001808	-	100	61.667	ENSCSAVG00000000655	-	99	61.667
ENSCSAVG00000001808	-	100	45.455	ENSCSAVG00000011146	-	82	45.455
ENSCSAVG00000001808	-	100	50.655	ENSCSAVG00000010156	-	99	50.655
ENSCSAVG00000001808	-	100	39.098	ENSCSAVG00000009739	-	80	39.098
ENSCSAVG00000001808	-	100	63.462	ENSCSAVG00000009583	-	100	58.750
ENSCSAVG00000001808	-	100	40.351	ENSCSAVG00000001949	-	98	40.351
ENSCSAVG00000001808	-	100	35.548	ENSCSAVG00000009217	-	99	35.548
ENSCSAVG00000001808	-	100	60.191	ENSCSAVG00000001989	-	100	60.191
ENSCSAVG00000001808	-	100	49.844	ENSCSAVG00000007589	-	100	49.844
ENSCSAVG00000001808	-	100	54.237	ENSCSAVG00000002179	-	100	54.237
ENSCSAVG00000001808	-	99	34.286	ENSCSAVG00000006729	-	71	33.851
ENSCSAVG00000001808	-	100	57.778	ENSCSAVG00000004703	-	100	57.718
ENSCSAVG00000001808	-	99	43.103	ENSCSAVG00000004543	-	99	37.931
ENSCSAVG00000001808	-	100	54.913	ENSCSAVG00000010960	-	100	59.310
ENSCSAVG00000001808	-	100	53.498	ENSCSAVG00000000520	-	100	53.498
ENSCSAVG00000001808	-	100	57.143	ENSCSAVG00000000293	-	100	56.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001808	-	100	46.835	ENSAPOG00000008802	-	99	46.067	Acanthochromis_polyacanthus
ENSCSAVG00000001808	-	100	49.419	ENSAPOG00000006303	-	91	46.520	Acanthochromis_polyacanthus
ENSCSAVG00000001808	-	100	45.082	ENSAPOG00000019960	-	93	43.902	Acanthochromis_polyacanthus
ENSCSAVG00000001808	-	100	51.613	ENSACIG00000022658	-	90	50.833	Amphilophus_citrinellus
ENSCSAVG00000001808	-	100	48.760	ENSACIG00000004745	-	94	48.760	Amphilophus_citrinellus
ENSCSAVG00000001808	-	100	44.164	ENSAOCG00000013710	-	83	44.164	Amphiprion_ocellaris
ENSCSAVG00000001808	-	100	44.492	ENSAOCG00000014165	-	83	44.492	Amphiprion_ocellaris
ENSCSAVG00000001808	-	100	47.157	ENSAOCG00000013130	-	78	47.157	Amphiprion_ocellaris
ENSCSAVG00000001808	-	100	47.157	ENSAPEG00000009383	-	83	45.455	Amphiprion_percula
ENSCSAVG00000001808	-	100	48.534	ENSAPEG00000006650	-	90	47.619	Amphiprion_percula
ENSCSAVG00000001808	-	100	50.804	ENSATEG00000015695	-	97	50.804	Anabas_testudineus
ENSCSAVG00000001808	-	100	50.804	ENSATEG00000017618	-	97	50.804	Anabas_testudineus
ENSCSAVG00000001808	-	100	48.819	ENSACLG00000021343	-	100	42.687	Astatotilapia_calliptera
ENSCSAVG00000001808	-	100	46.707	ENSACLG00000026703	-	72	47.638	Astatotilapia_calliptera
ENSCSAVG00000001808	-	100	46.154	ENSACLG00000023513	-	91	45.909	Astatotilapia_calliptera
ENSCSAVG00000001808	-	100	49.180	ENSACLG00000018746	-	89	43.275	Astatotilapia_calliptera
ENSCSAVG00000001808	-	100	43.182	ENSACLG00000019291	-	94	43.182	Astatotilapia_calliptera
ENSCSAVG00000001808	-	100	50.198	ENSAMXG00000039408	-	96	50.198	Astyanax_mexicanus
ENSCSAVG00000001808	-	100	50.625	ENSAMXG00000042275	-	95	50.625	Astyanax_mexicanus
ENSCSAVG00000001808	-	99	58.955	ENSAMXG00000035920	-	90	58.955	Astyanax_mexicanus
ENSCSAVG00000001808	-	100	52.866	ENSAMXG00000043302	-	72	52.866	Astyanax_mexicanus
ENSCSAVG00000001808	-	99	55.429	ENSAMXG00000041975	-	97	55.429	Astyanax_mexicanus
ENSCSAVG00000001808	-	100	48.739	ENSBTAG00000016191	ZNF32	70	48.739	Bos_taurus
ENSCSAVG00000001808	-	100	48.739	ENSCHIG00000021099	ZNF32	70	48.739	Capra_hircus
ENSCSAVG00000001808	-	100	44.915	ENSCVAG00000021225	-	95	50.980	Cyprinodon_variegatus
ENSCSAVG00000001808	-	100	48.993	ENSDARG00000099986	si:ch211-207i20.2	60	48.993	Danio_rerio
ENSCSAVG00000001808	-	100	49.580	ENSDNOG00000035046	ZNF32	70	49.580	Dasypus_novemcinctus
ENSCSAVG00000001808	-	100	48.739	ENSEASG00005006910	ZNF32	71	48.739	Equus_asinus_asinus
ENSCSAVG00000001808	-	100	48.739	ENSECAG00000023676	ZNF32	71	48.739	Equus_caballus
ENSCSAVG00000001808	-	99	49.206	ENSELUG00000021229	-	84	49.206	Esox_lucius
ENSCSAVG00000001808	-	100	45.091	ENSFHEG00000018063	-	90	44.201	Fundulus_heteroclitus
ENSCSAVG00000001808	-	100	47.059	ENSFHEG00000000678	-	72	47.059	Fundulus_heteroclitus
ENSCSAVG00000001808	-	100	43.987	ENSGAFG00000020499	-	62	43.987	Gambusia_affinis
ENSCSAVG00000001808	-	100	44.554	ENSGACG00000010352	si:ch211-207i20.2	62	44.554	Gasterosteus_aculeatus
ENSCSAVG00000001808	-	100	47.812	ENSHBUG00000015166	-	85	47.812	Haplochromis_burtoni
ENSCSAVG00000001808	-	100	47.761	ENSHBUG00000021003	-	92	47.761	Haplochromis_burtoni
ENSCSAVG00000001808	-	99	42.339	ENSHBUG00000013296	-	97	41.438	Haplochromis_burtoni
ENSCSAVG00000001808	-	99	52.970	ENSIPUG00000021998	-	95	52.970	Ictalurus_punctatus
ENSCSAVG00000001808	-	100	51.587	ENSIPUG00000002655	-	98	51.587	Ictalurus_punctatus
ENSCSAVG00000001808	-	100	50.000	ENSIPUG00000022741	-	80	50.000	Ictalurus_punctatus
ENSCSAVG00000001808	-	100	48.101	ENSIPUG00000005733	-	81	48.101	Ictalurus_punctatus
ENSCSAVG00000001808	-	100	50.279	ENSIPUG00000023761	-	64	50.279	Ictalurus_punctatus
ENSCSAVG00000001808	-	100	49.474	ENSLBEG00000020128	-	97	48.718	Labrus_bergylta
ENSCSAVG00000001808	-	100	45.763	ENSMAMG00000014734	-	54	45.763	Mastacembelus_armatus
ENSCSAVG00000001808	-	100	45.902	ENSMZEG00005026082	-	70	45.902	Maylandia_zebra
ENSCSAVG00000001808	-	100	45.425	ENSMZEG00005014592	-	93	45.425	Maylandia_zebra
ENSCSAVG00000001808	-	100	48.739	ENSMZEG00005007262	-	99	41.697	Maylandia_zebra
ENSCSAVG00000001808	-	100	49.180	ENSMZEG00005003336	-	86	45.926	Maylandia_zebra
ENSCSAVG00000001808	-	100	47.826	ENSMZEG00005021052	-	74	47.826	Maylandia_zebra
ENSCSAVG00000001808	-	100	46.983	ENSMZEG00005012715	-	75	46.983	Maylandia_zebra
ENSCSAVG00000001808	-	100	43.295	ENSMZEG00005020162	-	74	43.295	Maylandia_zebra
ENSCSAVG00000001808	-	100	38.824	ENSMZEG00005020156	-	82	39.688	Maylandia_zebra
ENSCSAVG00000001808	-	100	51.515	ENSMZEG00005019918	-	92	48.649	Maylandia_zebra
ENSCSAVG00000001808	-	100	45.699	ENSMZEG00005025343	-	77	44.330	Maylandia_zebra
ENSCSAVG00000001808	-	100	46.429	ENSMMOG00000004460	-	96	46.429	Mola_mola
ENSCSAVG00000001808	-	99	47.727	ENSMMOG00000010703	-	92	42.500	Mola_mola
ENSCSAVG00000001808	-	100	40.562	ENSMMOG00000006131	-	91	40.329	Mola_mola
ENSCSAVG00000001808	-	100	44.444	ENSMALG00000004216	-	63	44.444	Monopterus_albus
ENSCSAVG00000001808	-	100	49.367	ENSMALG00000007051	-	97	48.780	Monopterus_albus
ENSCSAVG00000001808	-	100	48.639	ENSMALG00000015655	-	99	44.776	Monopterus_albus
ENSCSAVG00000001808	-	99	51.111	MGP_PahariEiJ_G0022533	Zfp637	71	47.973	Mus_pahari
ENSCSAVG00000001808	-	99	51.111	MGP_SPRETEiJ_G0029809	Zfp637	71	47.973	Mus_spretus
ENSCSAVG00000001808	-	100	48.214	ENSNGAG00000020281	Zfp637	71	48.214	Nannospalax_galili
ENSCSAVG00000001808	-	100	43.188	ENSNBRG00000005796	-	96	43.188	Neolamprologus_brichardi
ENSCSAVG00000001808	-	100	46.844	ENSNBRG00000005805	-	96	46.844	Neolamprologus_brichardi
ENSCSAVG00000001808	-	100	49.201	ENSNBRG00000000523	-	66	49.201	Neolamprologus_brichardi
ENSCSAVG00000001808	-	100	44.053	ENSNBRG00000016564	-	84	44.053	Neolamprologus_brichardi
ENSCSAVG00000001808	-	100	42.500	ENSNBRG00000003000	-	80	42.500	Neolamprologus_brichardi
ENSCSAVG00000001808	-	100	46.528	ENSNBRG00000005849	-	91	46.528	Neolamprologus_brichardi
ENSCSAVG00000001808	-	100	46.078	ENSONIG00000015514	-	87	48.432	Oreochromis_niloticus
ENSCSAVG00000001808	-	100	46.497	ENSONIG00000005693	-	99	46.497	Oreochromis_niloticus
ENSCSAVG00000001808	-	99	43.450	ENSONIG00000015552	-	94	43.450	Oreochromis_niloticus
ENSCSAVG00000001808	-	100	48.739	ENSOARG00000002999	ZNF32	70	48.739	Ovis_aries
ENSCSAVG00000001808	-	100	42.517	ENSPLAG00000015973	-	99	43.889	Poecilia_latipinna
ENSCSAVG00000001808	-	100	43.462	ENSPMEG00000016458	-	95	42.320	Poecilia_mexicana
ENSCSAVG00000001808	-	100	47.594	ENSPMEG00000006726	-	90	46.528	Poecilia_mexicana
ENSCSAVG00000001808	-	100	51.515	ENSPREG00000010437	-	75	51.515	Poecilia_reticulata
ENSCSAVG00000001808	-	100	43.354	ENSPCAG00000005270	-	96	43.354	Procavia_capensis
ENSCSAVG00000001808	-	100	50.853	ENSPVAG00000009430	-	85	50.853	Pteropus_vampyrus
ENSCSAVG00000001808	-	100	44.156	ENSPNYG00000007597	-	84	44.156	Pundamilia_nyererei
ENSCSAVG00000001808	-	100	47.701	ENSPNYG00000002684	-	89	47.701	Pundamilia_nyererei
ENSCSAVG00000001808	-	100	50.000	ENSPNAG00000029997	-	96	50.000	Pygocentrus_nattereri
ENSCSAVG00000001808	-	100	43.913	ENSSFOG00015015878	-	91	43.125	Scleropages_formosus
ENSCSAVG00000001808	-	100	42.085	ENSSDUG00000015159	-	84	41.772	Seriola_dumerili
ENSCSAVG00000001808	-	100	50.746	ENSSDUG00000015182	-	69	50.746	Seriola_dumerili
ENSCSAVG00000001808	-	100	55.556	ENSSDUG00000008943	-	82	55.556	Seriola_dumerili
ENSCSAVG00000001808	-	100	46.565	ENSSDUG00000015254	-	88	46.565	Seriola_dumerili
ENSCSAVG00000001808	-	100	49.515	ENSSLDG00000020675	-	94	49.515	Seriola_lalandi_dorsalis
ENSCSAVG00000001808	-	100	45.813	ENSSLDG00000018273	-	95	45.813	Seriola_lalandi_dorsalis
ENSCSAVG00000001808	-	100	43.220	ENSSLDG00000012036	-	96	42.038	Seriola_lalandi_dorsalis
ENSCSAVG00000001808	-	100	43.333	ENSSARG00000000532	-	85	43.333	Sorex_araneus
ENSCSAVG00000001808	-	100	45.333	ENSXCOG00000008116	-	98	45.333	Xiphophorus_couchianus