EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001875 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7139 bases
Position: chrreftig_372:71050-78188
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003153	AARP2CN	PF08142.12	9e-19	1	1
ENSCSAVP00000003154	AARP2CN	PF08142.12	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003202	-	2356	-	ENSCSAVP00000003154	768 (aa)	-	H2YCV6
ENSCSAVT00000003201	-	2406	-	ENSCSAVP00000003153	780 (aa)	-	H2YCV5

Gene Model

Click here to download ENSCSAVG00000001875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001875	-	100	45.081	ENSG00000167721	TSR1	97	45.786	Homo_sapiens
ENSCSAVG00000001875	-	100	43.366	ENSAPOG00000020891	tsr1	96	43.712	Acanthochromis_polyacanthus
ENSCSAVG00000001875	-	99	44.376	ENSAMEG00000007599	TSR1	96	44.307	Ailuropoda_melanoleuca
ENSCSAVG00000001875	-	100	44.136	ENSACIG00000007090	tsr1	96	44.136	Amphilophus_citrinellus
ENSCSAVG00000001875	-	100	42.980	ENSAOCG00000023284	tsr1	96	43.511	Amphiprion_ocellaris
ENSCSAVG00000001875	-	94	42.353	ENSAPEG00000008452	tsr1	97	42.913	Amphiprion_percula
ENSCSAVG00000001875	-	100	43.521	ENSATEG00000021961	tsr1	96	43.243	Anabas_testudineus
ENSCSAVG00000001875	-	92	45.957	ENSAPLG00000013422	TSR1	96	46.694	Anas_platyrhynchos
ENSCSAVG00000001875	-	72	39.175	ENSACAG00000000859	TSR1	91	39.587	Anolis_carolinensis
ENSCSAVG00000001875	-	100	45.250	ENSANAG00000031071	TSR1	97	45.980	Aotus_nancymaae
ENSCSAVG00000001875	-	100	43.966	ENSACLG00000007595	tsr1	95	43.951	Astatotilapia_calliptera
ENSCSAVG00000001875	-	53	36.342	ENSAMXG00000008470	tsr1	89	35.845	Astyanax_mexicanus
ENSCSAVG00000001875	-	99	46.447	ENSBTAG00000004225	TSR1	96	46.641	Bos_taurus
ENSCSAVG00000001875	-	100	37.000	WBGene00006497	tag-151	96	36.555	Caenorhabditis_elegans
ENSCSAVG00000001875	-	100	45.000	ENSCJAG00000012456	TSR1	97	45.854	Callithrix_jacchus
ENSCSAVG00000001875	-	92	42.530	ENSCAFG00000019273	-	96	46.812	Canis_familiaris
ENSCSAVG00000001875	-	99	45.409	ENSCAFG00000002106	-	97	45.660	Canis_familiaris
ENSCSAVG00000001875	-	99	45.283	ENSCAFG00020009728	TSR1	97	45.535	Canis_lupus_dingo
ENSCSAVG00000001875	-	100	44.625	ENSCHIG00000023935	TSR1	97	45.511	Capra_hircus
ENSCSAVG00000001875	-	99	45.181	ENSTSYG00000005468	TSR1	97	45.603	Carlito_syrichta
ENSCSAVG00000001875	-	96	43.081	ENSCPOG00000014833	TSR1	99	43.832	Cavia_porcellus
ENSCSAVG00000001875	-	96	43.359	ENSCCAG00000028962	TSR1	98	44.110	Cebus_capucinus
ENSCSAVG00000001875	-	100	44.403	ENSCATG00000044262	TSR1	97	45.363	Cercocebus_atys
ENSCSAVG00000001875	-	100	44.569	ENSCLAG00000005567	TSR1	97	45.603	Chinchilla_lanigera
ENSCSAVG00000001875	-	100	44.403	ENSCSAG00000013788	TSR1	97	45.238	Chlorocebus_sabaeus
ENSCSAVG00000001875	-	98	45.929	ENSCPBG00000020363	TSR1	95	45.432	Chrysemys_picta_bellii
ENSCSAVG00000001875	-	100	68.844	ENSCING00000020658	-	99	69.434	Ciona_intestinalis
ENSCSAVG00000001875	-	100	43.127	ENSCANG00000033056	TSR1	96	43.782	Colobus_angolensis_palliatus
ENSCSAVG00000001875	-	100	44.055	ENSCGRG00001023942	Tsr1	97	44.641	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001875	-	100	42.079	ENSCGRG00000013015	Tsr1	96	41.698	Cricetulus_griseus_crigri
ENSCSAVG00000001875	-	100	43.812	ENSCSEG00000013009	tsr1	96	44.951	Cynoglossus_semilaevis
ENSCSAVG00000001875	-	100	44.802	ENSCVAG00000000506	tsr1	96	44.900	Cyprinodon_variegatus
ENSCSAVG00000001875	-	99	44.612	ENSDARG00000007744	tsr1	96	44.567	Danio_rerio
ENSCSAVG00000001875	-	100	44.737	ENSDNOG00000004715	TSR1	97	45.031	Dasypus_novemcinctus
ENSCSAVG00000001875	-	99	45.214	ENSDORG00000016371	-	97	45.443	Dipodomys_ordii
ENSCSAVG00000001875	-	100	39.821	ENSDORG00000023234	-	99	40.434	Dipodomys_ordii
ENSCSAVG00000001875	-	100	39.364	FBgn0037073	Tsr1	96	39.099	Drosophila_melanogaster
ENSCSAVG00000001875	-	89	60.215	ENSETEG00000017534	TSR1	86	60.714	Echinops_telfairi
ENSCSAVG00000001875	-	95	44.589	ENSEBUG00000013731	TSR1	95	44.589	Eptatretus_burgeri
ENSCSAVG00000001875	-	100	44.875	ENSEASG00005009302	TSR1	94	45.031	Equus_asinus_asinus
ENSCSAVG00000001875	-	100	44.862	ENSECAG00000009114	TSR1	97	45.352	Equus_caballus
ENSCSAVG00000001875	-	100	42.105	ENSELUG00000020984	tsr1	93	43.015	Esox_lucius
ENSCSAVG00000001875	-	99	46.357	ENSFCAG00000006313	TSR1	97	46.424	Felis_catus
ENSCSAVG00000001875	-	99	46.366	ENSFALG00000006532	TSR1	97	46.366	Ficedula_albicollis
ENSCSAVG00000001875	-	100	44.291	ENSFDAG00000006038	TSR1	97	44.598	Fukomys_damarensis
ENSCSAVG00000001875	-	100	43.990	ENSFHEG00000003626	tsr1	95	44.322	Fundulus_heteroclitus
ENSCSAVG00000001875	-	100	42.875	ENSGMOG00000010336	tsr1	96	43.213	Gadus_morhua
ENSCSAVG00000001875	-	100	43.905	ENSGAFG00000012993	tsr1	96	43.681	Gambusia_affinis
ENSCSAVG00000001875	-	100	43.750	ENSGACG00000010843	tsr1	96	43.781	Gasterosteus_aculeatus
ENSCSAVG00000001875	-	98	46.115	ENSGAGG00000025619	-	97	46.482	Gopherus_agassizii
ENSCSAVG00000001875	-	100	44.417	ENSGGOG00000001704	TSR1	97	45.660	Gorilla_gorilla
ENSCSAVG00000001875	-	100	43.857	ENSHBUG00000017904	tsr1	97	43.194	Haplochromis_burtoni
ENSCSAVG00000001875	-	93	41.026	ENSHGLG00000015688	-	95	40.470	Heterocephalus_glaber_female
ENSCSAVG00000001875	-	100	44.875	ENSHGLG00000012806	-	97	45.477	Heterocephalus_glaber_female
ENSCSAVG00000001875	-	100	44.875	ENSHGLG00100015392	TSR1	97	45.477	Heterocephalus_glaber_male
ENSCSAVG00000001875	-	100	44.233	ENSHCOG00000001432	tsr1	96	43.766	Hippocampus_comes
ENSCSAVG00000001875	-	100	41.995	ENSIPUG00000004618	tsr1	96	43.665	Ictalurus_punctatus
ENSCSAVG00000001875	-	100	44.444	ENSSTOG00000011819	TSR1	97	45.283	Ictidomys_tridecemlineatus
ENSCSAVG00000001875	-	92	43.962	ENSJJAG00000019505	Tsr1	94	43.826	Jaculus_jaculus
ENSCSAVG00000001875	-	100	43.881	ENSKMAG00000005763	tsr1	95	44.172	Kryptolebias_marmoratus
ENSCSAVG00000001875	-	100	43.103	ENSLBEG00000021823	tsr1	95	43.966	Labrus_bergylta
ENSCSAVG00000001875	-	100	45.353	ENSLACG00000002197	TSR1	96	45.590	Latimeria_chalumnae
ENSCSAVG00000001875	-	96	47.917	ENSLOCG00000006491	TSR1	95	47.917	Lepisosteus_oculatus
ENSCSAVG00000001875	-	100	44.527	ENSMFAG00000021330	TSR1	97	45.489	Macaca_fascicularis
ENSCSAVG00000001875	-	99	45.432	ENSMMUG00000017519	TSR1	97	45.865	Macaca_mulatta
ENSCSAVG00000001875	-	99	45.557	ENSMNEG00000031382	TSR1	97	45.990	Macaca_nemestrina
ENSCSAVG00000001875	-	100	44.279	ENSMLEG00000036733	TSR1	97	45.238	Mandrillus_leucophaeus
ENSCSAVG00000001875	-	100	43.681	ENSMAMG00000017918	tsr1	95	43.804	Mastacembelus_armatus
ENSCSAVG00000001875	-	100	43.735	ENSMZEG00005007477	tsr1	96	43.719	Maylandia_zebra
ENSCSAVG00000001875	-	100	45.409	ENSMGAG00000005576	TSR1	97	45.432	Meleagris_gallopavo
ENSCSAVG00000001875	-	100	45.101	ENSMICG00000012943	TSR1	97	45.603	Microcebus_murinus
ENSCSAVG00000001875	-	99	44.556	ENSMOCG00000022764	Tsr1	97	44.569	Microtus_ochrogaster
ENSCSAVG00000001875	-	100	43.890	ENSMMOG00000014280	tsr1	96	44.472	Mola_mola
ENSCSAVG00000001875	-	100	45.398	ENSMODG00000010658	TSR1	97	46.076	Monodelphis_domestica
ENSCSAVG00000001875	-	100	43.596	ENSMALG00000011681	tsr1	96	43.719	Monopterus_albus
ENSCSAVG00000001875	-	100	44.110	MGP_CAROLIEiJ_G0016727	Tsr1	97	44.724	Mus_caroli
ENSCSAVG00000001875	-	100	44.320	ENSMUSG00000038335	Tsr1	97	44.598	Mus_musculus
ENSCSAVG00000001875	-	100	44.236	MGP_PahariEiJ_G0017864	Tsr1	97	44.472	Mus_pahari
ENSCSAVG00000001875	-	100	44.320	MGP_SPRETEiJ_G0017570	Tsr1	97	44.724	Mus_spretus
ENSCSAVG00000001875	-	80	46.429	ENSMPUG00000013000	TSR1	96	46.958	Mustela_putorius_furo
ENSCSAVG00000001875	-	100	44.969	ENSMLUG00000003505	TSR1	97	46.173	Myotis_lucifugus
ENSCSAVG00000001875	-	50	35.101	ENSNGAG00000020455	-	95	36.772	Nannospalax_galili
ENSCSAVG00000001875	-	100	43.966	ENSNBRG00000020728	tsr1	95	44.089	Neolamprologus_brichardi
ENSCSAVG00000001875	-	100	42.803	ENSNLEG00000017184	TSR1	96	42.929	Nomascus_leucogenys
ENSCSAVG00000001875	-	99	41.772	ENSMEUG00000015828	TSR1	97	42.317	Notamacropus_eugenii
ENSCSAVG00000001875	-	100	44.183	ENSONIG00000013131	tsr1	96	44.183	Oreochromis_niloticus
ENSCSAVG00000001875	-	96	44.545	ENSOANG00000008637	TSR1	96	43.984	Ornithorhynchus_anatinus
ENSCSAVG00000001875	-	100	44.931	ENSOCUG00000014256	TSR1	97	46.048	Oryctolagus_cuniculus
ENSCSAVG00000001875	-	100	43.896	ENSORLG00000004926	tsr1	95	44.294	Oryzias_latipes
ENSCSAVG00000001875	-	100	43.951	ENSORLG00020008792	tsr1	95	44.431	Oryzias_latipes_hni
ENSCSAVG00000001875	-	100	43.681	ENSORLG00015013838	tsr1	95	44.078	Oryzias_latipes_hsok
ENSCSAVG00000001875	-	100	43.881	ENSOMEG00000004830	tsr1	95	44.348	Oryzias_melastigma
ENSCSAVG00000001875	-	100	44.348	ENSOGAG00000004492	TSR1	97	45.169	Otolemur_garnettii
ENSCSAVG00000001875	-	100	44.750	ENSOARG00000015437	TSR1	95	45.818	Ovis_aries
ENSCSAVG00000001875	-	100	45.081	ENSPPAG00000036355	TSR1	97	45.786	Pan_paniscus
ENSCSAVG00000001875	-	100	45.056	ENSPPRG00000015519	-	97	45.592	Panthera_pardus
ENSCSAVG00000001875	-	99	46.357	ENSPTIG00000010608	TSR1	97	45.970	Panthera_tigris_altaica
ENSCSAVG00000001875	-	100	45.081	ENSPTRG00000008547	TSR1	97	45.786	Pan_troglodytes
ENSCSAVG00000001875	-	99	43.970	ENSPANG00000024463	TSR1	97	44.584	Papio_anubis
ENSCSAVG00000001875	-	99	45.605	ENSPKIG00000013972	tsr1	96	44.981	Paramormyrops_kingsleyae
ENSCSAVG00000001875	-	85	46.715	ENSPSIG00000018258	TSR1	96	46.715	Pelodiscus_sinensis
ENSCSAVG00000001875	-	100	45.328	ENSPMGG00000011577	tsr1	96	45.074	Periophthalmus_magnuspinnatus
ENSCSAVG00000001875	-	100	43.704	ENSPEMG00000018033	Tsr1	97	44.417	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001875	-	100	45.105	ENSPCIG00000009357	TSR1	94	45.902	Phascolarctos_cinereus
ENSCSAVG00000001875	-	100	45.113	ENSPFOG00000004483	TSR1	96	45.682	Poecilia_formosa
ENSCSAVG00000001875	-	100	45.374	ENSPLAG00000022320	tsr1	96	44.625	Poecilia_latipinna
ENSCSAVG00000001875	-	100	44.815	ENSPMEG00000004577	tsr1	95	45.577	Poecilia_mexicana
ENSCSAVG00000001875	-	100	44.581	ENSPREG00000010354	tsr1	94	44.815	Poecilia_reticulata
ENSCSAVG00000001875	-	100	42.118	ENSPPYG00000007792	TSR1	97	43.300	Pongo_abelii
ENSCSAVG00000001875	-	50	36.709	ENSPCAG00000012973	-	63	38.259	Procavia_capensis
ENSCSAVG00000001875	-	100	44.654	ENSPCOG00000017928	TSR1	97	45.363	Propithecus_coquereli
ENSCSAVG00000001875	-	99	45.044	ENSPVAG00000002162	TSR1	97	45.340	Pteropus_vampyrus
ENSCSAVG00000001875	-	100	43.966	ENSPNYG00000016163	tsr1	95	43.951	Pundamilia_nyererei
ENSCSAVG00000001875	-	99	43.659	ENSPNAG00000008659	tsr1	96	44.172	Pygocentrus_nattereri
ENSCSAVG00000001875	-	99	44.975	ENSRNOG00000002980	Tsr1	97	44.845	Rattus_norvegicus
ENSCSAVG00000001875	-	99	45.352	ENSRBIG00000040016	TSR1	97	45.238	Rhinopithecus_bieti
ENSCSAVG00000001875	-	100	44.944	ENSRROG00000030361	TSR1	97	45.363	Rhinopithecus_roxellana
ENSCSAVG00000001875	-	100	44.542	ENSSBOG00000020785	TSR1	97	45.592	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001875	-	100	45.365	ENSSHAG00000011394	TSR1	97	46.474	Sarcophilus_harrisii
ENSCSAVG00000001875	-	100	45.828	ENSSFOG00015005455	tsr1	96	46.366	Scleropages_formosus
ENSCSAVG00000001875	-	100	43.033	ENSSMAG00000009504	tsr1	96	43.650	Scophthalmus_maximus
ENSCSAVG00000001875	-	100	43.650	ENSSDUG00000012074	tsr1	95	44.390	Seriola_dumerili
ENSCSAVG00000001875	-	100	43.634	ENSSLDG00000002031	tsr1	95	43.584	Seriola_lalandi_dorsalis
ENSCSAVG00000001875	-	93	48.444	ENSSARG00000000759	TSR1	90	48.444	Sorex_araneus
ENSCSAVG00000001875	-	99	46.442	ENSSPUG00000007042	TSR1	97	47.007	Sphenodon_punctatus
ENSCSAVG00000001875	-	100	43.735	ENSSPAG00000021951	tsr1	96	44.417	Stegastes_partitus
ENSCSAVG00000001875	-	99	45.649	ENSSSCG00000038534	TSR1	97	45.397	Sus_scrofa
ENSCSAVG00000001875	-	91	45.983	ENSTGUG00000005883	TSR1	98	46.345	Taeniopygia_guttata
ENSCSAVG00000001875	-	100	45.125	ENSTRUG00000004665	tsr1	96	44.750	Takifugu_rubripes
ENSCSAVG00000001875	-	100	45.031	ENSTNIG00000016196	tsr1	97	44.720	Tetraodon_nigroviridis
ENSCSAVG00000001875	-	61	73.267	ENSTBEG00000015275	-	59	73.267	Tupaia_belangeri
ENSCSAVG00000001875	-	100	45.069	ENSTTRG00000001177	TSR1	97	45.729	Tursiops_truncatus
ENSCSAVG00000001875	-	100	44.656	ENSUAMG00000025160	TSR1	97	45.466	Ursus_americanus
ENSCSAVG00000001875	-	97	44.041	ENSUMAG00000009294	TSR1	95	45.170	Ursus_maritimus
ENSCSAVG00000001875	-	85	40.351	ENSVPAG00000000228	TSR1	99	39.706	Vicugna_pacos
ENSCSAVG00000001875	-	99	45.409	ENSVVUG00000021767	TSR1	97	45.660	Vulpes_vulpes
ENSCSAVG00000001875	-	100	40.441	ENSXETG00000023797	tsr1	97	40.646	Xenopus_tropicalis
ENSCSAVG00000001875	-	100	44.055	ENSXCOG00000009635	tsr1	96	44.750	Xiphophorus_couchianus
ENSCSAVG00000001875	-	100	44.293	ENSXMAG00000001397	tsr1	93	44.417	Xiphophorus_maculatus