EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000001943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4009 bases
Position: chrreftig_234:246806-250814
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003261	Thg1	PF04446.12	5.9e-52	1	1
ENSCSAVP00000003262	Thg1	PF04446.12	6.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003311	-	816	-	ENSCSAVP00000003261	268 (aa)	-	H2YD63
ENSCSAVT00000003312	-	881	-	ENSCSAVP00000003262	266 (aa)	-	H2YD64

Gene Model

Click here to download ENSCSAVG00000001943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000001943	-	99	54.717	ENSG00000113272	THG1L	89	54.717	Homo_sapiens
ENSCSAVG00000001943	-	55	63.014	ENSAPOG00000012429	-	91	63.014	Acanthochromis_polyacanthus
ENSCSAVG00000001943	-	55	63.014	ENSAPOG00000010278	-	91	63.014	Acanthochromis_polyacanthus
ENSCSAVG00000001943	-	99	56.929	ENSAPOG00000002190	thg1l	88	56.929	Acanthochromis_polyacanthus
ENSCSAVG00000001943	-	99	54.717	ENSAMEG00000006356	THG1L	89	54.717	Ailuropoda_melanoleuca
ENSCSAVG00000001943	-	99	59.176	ENSACIG00000015946	thg1l	89	59.176	Amphilophus_citrinellus
ENSCSAVG00000001943	-	99	56.929	ENSAOCG00000015583	thg1l	88	56.929	Amphiprion_ocellaris
ENSCSAVG00000001943	-	99	55.805	ENSAPEG00000011671	thg1l	88	55.805	Amphiprion_percula
ENSCSAVG00000001943	-	99	56.604	ENSATEG00000001426	thg1l	97	55.411	Anabas_testudineus
ENSCSAVG00000001943	-	88	56.410	ENSAPLG00000013772	THG1L	98	56.410	Anas_platyrhynchos
ENSCSAVG00000001943	-	99	57.358	ENSACAG00000003330	THG1L	86	57.358	Anolis_carolinensis
ENSCSAVG00000001943	-	99	54.717	ENSANAG00000031173	-	89	54.717	Aotus_nancymaae
ENSCSAVG00000001943	-	98	52.672	ENSANAG00000025715	-	89	52.290	Aotus_nancymaae
ENSCSAVG00000001943	-	99	56.877	ENSACLG00000001490	thg1l	88	56.877	Astatotilapia_calliptera
ENSCSAVG00000001943	-	99	58.113	ENSAMXG00000042416	thg1l	89	58.113	Astyanax_mexicanus
ENSCSAVG00000001943	-	99	55.094	ENSBTAG00000010359	THG1L	89	55.094	Bos_taurus
ENSCSAVG00000001943	-	99	55.472	ENSCJAG00000018973	THG1L	89	55.472	Callithrix_jacchus
ENSCSAVG00000001943	-	99	54.340	ENSCAFG00000017348	THG1L	89	54.340	Canis_familiaris
ENSCSAVG00000001943	-	99	54.340	ENSCAFG00020025580	THG1L	89	54.340	Canis_lupus_dingo
ENSCSAVG00000001943	-	99	55.472	ENSCHIG00000011287	THG1L	89	55.472	Capra_hircus
ENSCSAVG00000001943	-	99	54.717	ENSTSYG00000001547	THG1L	89	54.717	Carlito_syrichta
ENSCSAVG00000001943	-	86	54.783	ENSCAPG00000013412	THG1L	98	54.783	Cavia_aperea
ENSCSAVG00000001943	-	99	55.472	ENSCPOG00000037046	THG1L	89	55.472	Cavia_porcellus
ENSCSAVG00000001943	-	99	55.094	ENSCCAG00000024953	THG1L	89	55.094	Cebus_capucinus
ENSCSAVG00000001943	-	99	55.094	ENSCATG00000040510	THG1L	89	55.094	Cercocebus_atys
ENSCSAVG00000001943	-	99	56.226	ENSCLAG00000013903	THG1L	89	56.226	Chinchilla_lanigera
ENSCSAVG00000001943	-	99	55.094	ENSCSAG00000010572	THG1L	89	55.094	Chlorocebus_sabaeus
ENSCSAVG00000001943	-	80	46.009	ENSCHOG00000007378	THG1L	87	46.009	Choloepus_hoffmanni
ENSCSAVG00000001943	-	99	57.143	ENSCPBG00000001551	THG1L	90	57.143	Chrysemys_picta_bellii
ENSCSAVG00000001943	-	85	81.057	ENSCING00000013151	-	90	81.057	Ciona_intestinalis
ENSCSAVG00000001943	-	99	55.094	ENSCANG00000039650	THG1L	89	55.094	Colobus_angolensis_palliatus
ENSCSAVG00000001943	-	100	55.805	ENSCGRG00001019597	Thg1l	98	54.506	Cricetulus_griseus_chok1gshd
ENSCSAVG00000001943	-	100	55.805	ENSCGRG00000003459	Thg1l	98	54.506	Cricetulus_griseus_crigri
ENSCSAVG00000001943	-	99	55.094	ENSCSEG00000019947	thg1l	88	55.094	Cynoglossus_semilaevis
ENSCSAVG00000001943	-	99	58.364	ENSCVAG00000011708	thg1l	89	59.551	Cyprinodon_variegatus
ENSCSAVG00000001943	-	100	55.056	ENSDARG00000038360	thg1l	99	46.939	Danio_rerio
ENSCSAVG00000001943	-	99	51.128	ENSDNOG00000002215	THG1L	89	51.128	Dasypus_novemcinctus
ENSCSAVG00000001943	-	99	55.094	ENSDORG00000007564	Thg1l	89	55.094	Dipodomys_ordii
ENSCSAVG00000001943	-	99	52.256	FBgn0283659	THG	86	52.256	Drosophila_melanogaster
ENSCSAVG00000001943	-	81	61.111	ENSETEG00000000463	THG1L	88	61.111	Echinops_telfairi
ENSCSAVG00000001943	-	99	54.380	ENSEBUG00000006216	thg1l	99	54.380	Eptatretus_burgeri
ENSCSAVG00000001943	-	99	54.717	ENSEASG00005000757	THG1L	89	54.717	Equus_asinus_asinus
ENSCSAVG00000001943	-	99	54.717	ENSECAG00000013378	THG1L	89	54.717	Equus_caballus
ENSCSAVG00000001943	-	99	53.962	ENSEEUG00000001923	THG1L	91	53.962	Erinaceus_europaeus
ENSCSAVG00000001943	-	99	59.108	ENSELUG00000005532	thg1l	88	59.108	Esox_lucius
ENSCSAVG00000001943	-	99	53.962	ENSFCAG00000022752	THG1L	81	53.962	Felis_catus
ENSCSAVG00000001943	-	99	58.647	ENSFALG00000008475	THG1L	91	58.647	Ficedula_albicollis
ENSCSAVG00000001943	-	99	55.472	ENSFDAG00000009417	THG1L	89	55.472	Fukomys_damarensis
ENSCSAVG00000001943	-	99	58.491	ENSGMOG00000015482	thg1l	97	58.491	Gadus_morhua
ENSCSAVG00000001943	-	99	58.647	ENSGALG00000003722	THG1L	90	58.647	Gallus_gallus
ENSCSAVG00000001943	-	97	57.854	ENSGAFG00000006870	thg1l	85	57.895	Gambusia_affinis
ENSCSAVG00000001943	-	99	58.113	ENSGACG00000018445	thg1l	89	58.113	Gasterosteus_aculeatus
ENSCSAVG00000001943	-	99	57.519	ENSGAGG00000016997	THG1L	99	57.519	Gopherus_agassizii
ENSCSAVG00000001943	-	99	55.094	ENSGGOG00000008668	THG1L	89	55.094	Gorilla_gorilla
ENSCSAVG00000001943	-	99	57.249	ENSHBUG00000004025	thg1l	89	57.249	Haplochromis_burtoni
ENSCSAVG00000001943	-	99	55.849	ENSHGLG00000008948	THG1L	89	55.849	Heterocephalus_glaber_female
ENSCSAVG00000001943	-	99	55.849	ENSHGLG00100007419	THG1L	89	55.849	Heterocephalus_glaber_male
ENSCSAVG00000001943	-	99	55.056	ENSHCOG00000002622	thg1l	88	55.056	Hippocampus_comes
ENSCSAVG00000001943	-	99	57.678	ENSIPUG00000006310	thg1l	98	57.678	Ictalurus_punctatus
ENSCSAVG00000001943	-	99	54.340	ENSSTOG00000014243	THG1L	89	54.340	Ictidomys_tridecemlineatus
ENSCSAVG00000001943	-	99	55.849	ENSJJAG00000022909	Thg1l	89	55.849	Jaculus_jaculus
ENSCSAVG00000001943	-	99	56.180	ENSKMAG00000009156	thg1l	88	56.180	Kryptolebias_marmoratus
ENSCSAVG00000001943	-	100	56.089	ENSLBEG00000013870	THG1L	89	56.089	Labrus_bergylta
ENSCSAVG00000001943	-	100	52.399	ENSLBEG00000022336	thg1l	99	52.399	Labrus_bergylta
ENSCSAVG00000001943	-	99	55.970	ENSLACG00000015528	THG1L	85	55.970	Latimeria_chalumnae
ENSCSAVG00000001943	-	99	59.245	ENSLOCG00000009255	thg1l	85	59.245	Lepisosteus_oculatus
ENSCSAVG00000001943	-	99	54.340	ENSLAFG00000004926	THG1L	89	54.340	Loxodonta_africana
ENSCSAVG00000001943	-	99	55.094	ENSMFAG00000041928	THG1L	98	52.830	Macaca_fascicularis
ENSCSAVG00000001943	-	99	55.094	ENSMNEG00000038597	THG1L	89	55.094	Macaca_nemestrina
ENSCSAVG00000001943	-	99	55.094	ENSMLEG00000025109	THG1L	89	55.094	Mandrillus_leucophaeus
ENSCSAVG00000001943	-	99	54.815	ENSMAMG00000012302	thg1l	88	54.815	Mastacembelus_armatus
ENSCSAVG00000001943	-	99	56.877	ENSMZEG00005008770	thg1l	89	56.877	Maylandia_zebra
ENSCSAVG00000001943	-	99	58.271	ENSMGAG00000004968	THG1L	88	58.271	Meleagris_gallopavo
ENSCSAVG00000001943	-	100	55.805	ENSMAUG00000012121	Thg1l	97	54.741	Mesocricetus_auratus
ENSCSAVG00000001943	-	99	54.717	ENSMICG00000038734	THG1L	80	54.717	Microcebus_murinus
ENSCSAVG00000001943	-	100	56.554	ENSMOCG00000005041	Thg1l	97	55.603	Microtus_ochrogaster
ENSCSAVG00000001943	-	99	56.929	ENSMMOG00000009355	thg1l	98	47.475	Mola_mola
ENSCSAVG00000001943	-	99	53.962	ENSMODG00000008328	THG1L	93	53.962	Monodelphis_domestica
ENSCSAVG00000001943	-	99	56.343	ENSMALG00000005060	thg1l	88	56.343	Monopterus_albus
ENSCSAVG00000001943	-	99	56.767	MGP_CAROLIEiJ_G0016236	Thg1l	97	55.603	Mus_caroli
ENSCSAVG00000001943	-	99	56.767	ENSMUSG00000011254	Thg1l	97	55.603	Mus_musculus
ENSCSAVG00000001943	-	99	56.391	MGP_PahariEiJ_G0017372	Thg1l	97	55.172	Mus_pahari
ENSCSAVG00000001943	-	99	56.767	MGP_SPRETEiJ_G0017077	Thg1l	97	55.603	Mus_spretus
ENSCSAVG00000001943	-	99	54.717	ENSMPUG00000013462	THG1L	89	54.717	Mustela_putorius_furo
ENSCSAVG00000001943	-	99	54.717	ENSMLUG00000015926	THG1L	89	54.717	Myotis_lucifugus
ENSCSAVG00000001943	-	99	55.094	ENSNGAG00000012087	Thg1l	98	52.814	Nannospalax_galili
ENSCSAVG00000001943	-	99	57.249	ENSNBRG00000017747	thg1l	89	57.249	Neolamprologus_brichardi
ENSCSAVG00000001943	-	99	55.094	ENSNLEG00000004166	THG1L	89	55.094	Nomascus_leucogenys
ENSCSAVG00000001943	-	99	55.094	ENSOPRG00000013774	THG1L	89	55.094	Ochotona_princeps
ENSCSAVG00000001943	-	99	56.604	ENSODEG00000009719	THG1L	89	56.604	Octodon_degus
ENSCSAVG00000001943	-	99	56.506	ENSONIG00000017663	thg1l	87	56.506	Oreochromis_niloticus
ENSCSAVG00000001943	-	99	55.224	ENSOANG00000005074	THG1L	89	54.478	Ornithorhynchus_anatinus
ENSCSAVG00000001943	-	99	55.639	ENSOCUG00000001053	THG1L	89	55.639	Oryctolagus_cuniculus
ENSCSAVG00000001943	-	99	58.736	ENSORLG00000007424	thg1l	89	58.736	Oryzias_latipes
ENSCSAVG00000001943	-	99	58.736	ENSORLG00020006322	thg1l	88	58.736	Oryzias_latipes_hni
ENSCSAVG00000001943	-	99	58.736	ENSORLG00015006415	thg1l	89	58.736	Oryzias_latipes_hsok
ENSCSAVG00000001943	-	99	56.929	ENSOMEG00000011477	thg1l	94	55.603	Oryzias_melastigma
ENSCSAVG00000001943	-	99	54.717	ENSOGAG00000009057	THG1L	89	54.717	Otolemur_garnettii
ENSCSAVG00000001943	-	99	55.472	ENSOARG00000012620	THG1L	89	55.472	Ovis_aries
ENSCSAVG00000001943	-	99	55.094	ENSPPAG00000042438	THG1L	89	55.094	Pan_paniscus
ENSCSAVG00000001943	-	99	53.962	ENSPPRG00000007563	THG1L	89	53.962	Panthera_pardus
ENSCSAVG00000001943	-	99	53.962	ENSPTIG00000013921	THG1L	99	53.962	Panthera_tigris_altaica
ENSCSAVG00000001943	-	99	55.094	ENSPTRG00000017473	THG1L	89	55.094	Pan_troglodytes
ENSCSAVG00000001943	-	99	54.717	ENSPANG00000025147	THG1L	89	54.717	Papio_anubis
ENSCSAVG00000001943	-	100	55.762	ENSPKIG00000002407	thg1l	87	55.762	Paramormyrops_kingsleyae
ENSCSAVG00000001943	-	80	55.869	ENSPSIG00000005072	THG1L	99	55.869	Pelodiscus_sinensis
ENSCSAVG00000001943	-	99	50.929	ENSPMGG00000020712	thg1l	88	51.321	Periophthalmus_magnuspinnatus
ENSCSAVG00000001943	-	99	56.226	ENSPEMG00000022707	Thg1l	97	55.217	Peromyscus_maniculatus_bairdii
ENSCSAVG00000001943	-	68	56.284	ENSPMAG00000000881	thg1l	89	53.846	Petromyzon_marinus
ENSCSAVG00000001943	-	99	54.340	ENSPCIG00000018471	THG1L	98	51.887	Phascolarctos_cinereus
ENSCSAVG00000001943	-	99	57.519	ENSPLAG00000019419	thg1l	92	57.519	Poecilia_latipinna
ENSCSAVG00000001943	-	99	57.519	ENSPMEG00000017382	-	89	57.519	Poecilia_mexicana
ENSCSAVG00000001943	-	99	57.895	ENSPMEG00000017466	thg1l	89	57.895	Poecilia_mexicana
ENSCSAVG00000001943	-	97	57.471	ENSPREG00000019678	thg1l	89	57.519	Poecilia_reticulata
ENSCSAVG00000001943	-	99	55.472	ENSPPYG00000015993	THG1L	89	55.472	Pongo_abelii
ENSCSAVG00000001943	-	99	53.585	ENSPCAG00000016378	THG1L	89	53.585	Procavia_capensis
ENSCSAVG00000001943	-	99	54.717	ENSPCOG00000028595	THG1L	89	54.717	Propithecus_coquereli
ENSCSAVG00000001943	-	86	39.130	ENSPVAG00000006279	THG1L	98	39.130	Pteropus_vampyrus
ENSCSAVG00000001943	-	99	56.877	ENSPNYG00000000169	thg1l	89	56.877	Pundamilia_nyererei
ENSCSAVG00000001943	-	99	58.113	ENSPNAG00000013944	thg1l	89	58.113	Pygocentrus_nattereri
ENSCSAVG00000001943	-	99	56.981	ENSRNOG00000005539	Thg1l	89	56.981	Rattus_norvegicus
ENSCSAVG00000001943	-	99	55.094	ENSRBIG00000037537	THG1L	98	52.830	Rhinopithecus_bieti
ENSCSAVG00000001943	-	99	55.094	ENSRROG00000045380	THG1L	89	55.094	Rhinopithecus_roxellana
ENSCSAVG00000001943	-	80	50.230	YGR024C	-	92	50.230	Saccharomyces_cerevisiae
ENSCSAVG00000001943	-	99	55.472	ENSSBOG00000024790	THG1L	89	55.472	Saimiri_boliviensis_boliviensis
ENSCSAVG00000001943	-	99	53.962	ENSSHAG00000016908	THG1L	78	53.962	Sarcophilus_harrisii
ENSCSAVG00000001943	-	99	58.271	ENSSFOG00015017619	thg1l	85	58.271	Scleropages_formosus
ENSCSAVG00000001943	-	99	55.472	ENSSMAG00000008988	thg1l	89	55.472	Scophthalmus_maximus
ENSCSAVG00000001943	-	99	56.618	ENSSDUG00000009841	thg1l	97	55.882	Seriola_dumerili
ENSCSAVG00000001943	-	99	56.618	ENSSLDG00000003416	thg1l	89	56.618	Seriola_lalandi_dorsalis
ENSCSAVG00000001943	-	81	58.796	ENSSARG00000012216	THG1L	88	58.796	Sorex_araneus
ENSCSAVG00000001943	-	99	51.880	ENSSPUG00000007060	THG1L	99	51.880	Sphenodon_punctatus
ENSCSAVG00000001943	-	99	58.491	ENSSPAG00000008744	thg1l	89	58.491	Stegastes_partitus
ENSCSAVG00000001943	-	99	54.717	ENSSSCG00000036047	THG1L	89	54.717	Sus_scrofa
ENSCSAVG00000001943	-	99	57.895	ENSTGUG00000000618	THG1L	97	57.895	Taeniopygia_guttata
ENSCSAVG00000001943	-	99	56.554	ENSTRUG00000009758	thg1l	97	47.138	Takifugu_rubripes
ENSCSAVG00000001943	-	99	54.340	ENSTNIG00000017067	thg1l	98	48.658	Tetraodon_nigroviridis
ENSCSAVG00000001943	-	56	36.667	ENSTBEG00000000788	-	50	36.667	Tupaia_belangeri
ENSCSAVG00000001943	-	99	55.849	ENSTTRG00000006448	THG1L	89	55.849	Tursiops_truncatus
ENSCSAVG00000001943	-	99	54.717	ENSUAMG00000013357	THG1L	95	53.913	Ursus_americanus
ENSCSAVG00000001943	-	99	54.717	ENSUMAG00000000769	THG1L	89	54.717	Ursus_maritimus
ENSCSAVG00000001943	-	89	53.586	ENSVPAG00000007839	THG1L	80	53.586	Vicugna_pacos
ENSCSAVG00000001943	-	99	54.340	ENSVVUG00000004234	THG1L	89	54.340	Vulpes_vulpes
ENSCSAVG00000001943	-	99	55.263	ENSXETG00000007902	thg1l	90	55.263	Xenopus_tropicalis
ENSCSAVG00000001943	-	97	57.854	ENSXMAG00000008240	thg1l	89	57.836	Xiphophorus_maculatus