EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000001959 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
3038 bases
Position
chrreftig_12:900462-903499
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000003287MMR_HSR1PF01926.231.2e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000003337-1049-ENSCSAVP00000003287182 (aa)-H2YD89
Gene Model
Click here to download ENSCSAVG00000001959's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000001959's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000001959-9852.514ENSCSAVG00000007620-9652.514
ENSCSAVG00000001959-9863.128ENSCSAVG00000000059-10063.128
ENSCSAVG00000001959-9147.590ENSCSAVG00000000504-8947.590
ENSCSAVG00000001959-9240.571ENSCSAVG00000000015-9140.571
ENSCSAVG00000001959-7837.762ENSCSAVG00000008336-8337.762
ENSCSAVG00000001959-9242.857ENSCSAVG00000008290-8742.857
ENSCSAVG00000001959-9869.832ENSCSAVG00000007010-9869.832
ENSCSAVG00000001959-9874.302ENSCSAVG00000007011-9674.302
ENSCSAVG00000001959-7338.346ENSCSAVG00000010686-5638.346
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000001959-9974.033ENSG00000004059ARF59974.033Homo_sapiens
ENSCSAVG00000001959-10075.824ENSAPOG00000000667-10075.824Acanthochromis_polyacanthus
ENSCSAVG00000001959-9974.033ENSAMEG00000004635ARF59974.033Ailuropoda_melanoleuca
ENSCSAVG00000001959-9975.691ENSACIG00000005843arf59975.691Amphilophus_citrinellus
ENSCSAVG00000001959-9869.832ENSACIG00000014610zgc:1102869869.832Amphilophus_citrinellus
ENSCSAVG00000001959-10074.176ENSACIG00000000467-10074.176Amphilophus_citrinellus
ENSCSAVG00000001959-10072.527ENSAOCG00000008113-10072.527Amphiprion_ocellaris
ENSCSAVG00000001959-10075.275ENSAOCG00000023329arf510075.275Amphiprion_ocellaris
ENSCSAVG00000001959-10075.275ENSAPEG00000024614arf510075.275Amphiprion_percula
ENSCSAVG00000001959-10072.527ENSAPEG00000003087-10072.527Amphiprion_percula
ENSCSAVG00000001959-9975.138ENSATEG00000003053ARF59975.138Anabas_testudineus
ENSCSAVG00000001959-10074.725ENSATEG00000001302-10074.725Anabas_testudineus
ENSCSAVG00000001959-9974.033ENSANAG00000026446ARF59974.033Aotus_nancymaae
ENSCSAVG00000001959-9976.243ENSACLG00000005705arf59976.243Astatotilapia_calliptera
ENSCSAVG00000001959-10074.725ENSACLG00000025604-10074.725Astatotilapia_calliptera
ENSCSAVG00000001959-9974.586ENSAMXG00000031467arf4a9974.586Astyanax_mexicanus
ENSCSAVG00000001959-9977.348ENSAMXG00000004249-9977.348Astyanax_mexicanus
ENSCSAVG00000001959-9975.691ENSAMXG00000031774ARF59975.691Astyanax_mexicanus
ENSCSAVG00000001959-9977.348ENSAMXG00000038224-9977.348Astyanax_mexicanus
ENSCSAVG00000001959-9974.033ENSBTAG00000009366ARF59974.033Bos_taurus
ENSCSAVG00000001959-9976.243WBGene00000183arf-39976.243Caenorhabditis_elegans
ENSCSAVG00000001959-9974.033ENSCJAG00000017604ARF59974.033Callithrix_jacchus
ENSCSAVG00000001959-9962.326ENSCAFG00020021629ARF59962.326Canis_lupus_dingo
ENSCSAVG00000001959-9974.033ENSCHIG00000018906ARF59974.033Capra_hircus
ENSCSAVG00000001959-9971.978ENSCPOG00000006239ARF59971.978Cavia_porcellus
ENSCSAVG00000001959-9974.033ENSCCAG00000027943-9974.033Cebus_capucinus
ENSCSAVG00000001959-9974.033ENSCATG00000010217ARF59974.033Cercocebus_atys
ENSCSAVG00000001959-9974.033ENSCLAG00000007930ARF59974.033Chinchilla_lanigera
ENSCSAVG00000001959-9974.033ENSCSAG00000010208ARF59974.033Chlorocebus_sabaeus
ENSCSAVG00000001959-10087.363ENSCING00000004846-10087.363Ciona_intestinalis
ENSCSAVG00000001959-8974.691ENSCANG00000037234ARF59874.691Colobus_angolensis_palliatus
ENSCSAVG00000001959-9974.033ENSCGRG00001024919Arf59974.033Cricetulus_griseus_chok1gshd
ENSCSAVG00000001959-9974.033ENSCSEG00000006004arf59974.033Cynoglossus_semilaevis
ENSCSAVG00000001959-9976.243ENSCVAG00000007314-9976.243Cyprinodon_variegatus
ENSCSAVG00000001959-9976.243ENSCVAG00000009124ARF59976.243Cyprinodon_variegatus
ENSCSAVG00000001959-10072.527ENSCVAG00000011381-10072.527Cyprinodon_variegatus
ENSCSAVG00000001959-9974.586ENSDARG00000045989arf4a9974.586Danio_rerio
ENSCSAVG00000001959-9960.440ENSDARG00000074210ARF58860.440Danio_rerio
ENSCSAVG00000001959-9976.796ENSDARG00000113899zgc:776509976.796Danio_rerio
ENSCSAVG00000001959-9977.348ENSDARG00000070472arf59977.348Danio_rerio
ENSCSAVG00000001959-9974.033ENSDORG00000000325Arf59974.033Dipodomys_ordii
ENSCSAVG00000001959-9974.586FBgn0013749Arf102F9974.586Drosophila_melanogaster
ENSCSAVG00000001959-9772.159ENSETEG00000009275ARF59972.159Echinops_telfairi
ENSCSAVG00000001959-9967.403ENSEBUG00000004484-9967.403Eptatretus_burgeri
ENSCSAVG00000001959-9974.033ENSEBUG00000014420-9974.033Eptatretus_burgeri
ENSCSAVG00000001959-9967.956ENSELUG00000014428arf49967.956Esox_lucius
ENSCSAVG00000001959-9974.033ENSFCAG00000005482ARF59974.033Felis_catus
ENSCSAVG00000001959-9975.691ENSFHEG00000023119arf59975.691Fundulus_heteroclitus
ENSCSAVG00000001959-9974.586ENSGMOG00000008747arf59974.586Gadus_morhua
ENSCSAVG00000001959-9977.348ENSGMOG00000019109-9977.348Gadus_morhua
ENSCSAVG00000001959-9976.243ENSGAFG00000018703arf59976.243Gambusia_affinis
ENSCSAVG00000001959-10073.077ENSGAFG00000005163-10073.077Gambusia_affinis
ENSCSAVG00000001959-9975.691ENSGACG00000000686arf59975.691Gasterosteus_aculeatus
ENSCSAVG00000001959-10073.626ENSGACG00000012500-10073.626Gasterosteus_aculeatus
ENSCSAVG00000001959-9973.481ENSGAGG00000000231ARF59973.481Gopherus_agassizii
ENSCSAVG00000001959-9974.033ENSGGOG00000016749ARF59974.033Gorilla_gorilla
ENSCSAVG00000001959-10074.725ENSHBUG00000011041-10074.725Haplochromis_burtoni
ENSCSAVG00000001959-9976.243ENSHBUG00000008546arf59976.243Haplochromis_burtoni
ENSCSAVG00000001959-9974.033ENSHGLG00000007494ARF59974.033Heterocephalus_glaber_female
ENSCSAVG00000001959-10072.527ENSHGLG00100006040ARF56072.527Heterocephalus_glaber_male
ENSCSAVG00000001959-9974.033ENSHCOG00000015577-10074.033Hippocampus_comes
ENSCSAVG00000001959-9976.243ENSIPUG00000004215arf59976.243Ictalurus_punctatus
ENSCSAVG00000001959-9975.691ENSIPUG00000007016arf49975.691Ictalurus_punctatus
ENSCSAVG00000001959-9964.641ENSIPUG00000006913-7064.641Ictalurus_punctatus
ENSCSAVG00000001959-9977.348ENSIPUG00000004159Arf59977.348Ictalurus_punctatus
ENSCSAVG00000001959-9974.033ENSSTOG00000002104ARF59974.033Ictidomys_tridecemlineatus
ENSCSAVG00000001959-9974.033ENSJJAG00000005105Arf59974.033Jaculus_jaculus
ENSCSAVG00000001959-10072.527ENSKMAG00000012816-10072.527Kryptolebias_marmoratus
ENSCSAVG00000001959-9975.691ENSLBEG00000026532arf59975.691Labrus_bergylta
ENSCSAVG00000001959-9875.978ENSLBEG00000012002-9875.978Labrus_bergylta
ENSCSAVG00000001959-9974.033ENSLAFG00000011469ARF59974.033Loxodonta_africana
ENSCSAVG00000001959-9974.033ENSMFAG00000019772ARF59974.033Macaca_fascicularis
ENSCSAVG00000001959-9974.033ENSMMUG00000046381ARF59974.033Macaca_mulatta
ENSCSAVG00000001959-9974.033ENSMNEG00000040893ARF59974.033Macaca_nemestrina
ENSCSAVG00000001959-10074.176ENSMAMG00000008223-10074.176Mastacembelus_armatus
ENSCSAVG00000001959-9975.691ENSMAMG00000021160arf59975.691Mastacembelus_armatus
ENSCSAVG00000001959-9976.243ENSMZEG00005015033arf56676.243Maylandia_zebra
ENSCSAVG00000001959-8875.000ENSMZEG00005019741-9475.000Maylandia_zebra
ENSCSAVG00000001959-9974.033ENSMAUG00000014825Arf59974.033Mesocricetus_auratus
ENSCSAVG00000001959-9974.033ENSMICG00000000091ARF59974.033Microcebus_murinus
ENSCSAVG00000001959-9974.033ENSMOCG00000022861Arf59974.033Microtus_ochrogaster
ENSCSAVG00000001959-9974.586ENSMODG00000015229ARF59974.586Monodelphis_domestica
ENSCSAVG00000001959-9967.956ENSMALG00000022638zgc:11028610067.956Monopterus_albus
ENSCSAVG00000001959-9976.243ENSMALG00000010117-9976.243Monopterus_albus
ENSCSAVG00000001959-10073.626ENSMALG00000006020-10073.626Monopterus_albus
ENSCSAVG00000001959-9974.033MGP_CAROLIEiJ_G0028156Arf59974.033Mus_caroli
ENSCSAVG00000001959-9974.033ENSMUSG00000020440Arf59974.033Mus_musculus
ENSCSAVG00000001959-9974.033MGP_PahariEiJ_G0021914Arf59974.033Mus_pahari
ENSCSAVG00000001959-9974.033MGP_SPRETEiJ_G0029156Arf59974.033Mus_spretus
ENSCSAVG00000001959-9974.033ENSMPUG00000006675ARF59974.033Mustela_putorius_furo
ENSCSAVG00000001959-9974.033ENSMLUG00000017122ARF59974.033Myotis_lucifugus
ENSCSAVG00000001959-9974.033ENSNGAG00000011743Arf59974.033Nannospalax_galili
ENSCSAVG00000001959-9976.243ENSNBRG00000018854arf59976.243Neolamprologus_brichardi
ENSCSAVG00000001959-9974.033ENSODEG00000011800ARF59974.033Octodon_degus
ENSCSAVG00000001959-10074.725ENSONIG00000014890-10074.725Oreochromis_niloticus
ENSCSAVG00000001959-9976.243ENSONIG00000007594arf59976.243Oreochromis_niloticus
ENSCSAVG00000001959-9974.033ENSOCUG00000024365ARF59974.033Oryctolagus_cuniculus
ENSCSAVG00000001959-10074.725ENSORLG00020001755-10074.725Oryzias_latipes_hni
ENSCSAVG00000001959-10074.725ENSOMEG00000000211-6574.725Oryzias_melastigma
ENSCSAVG00000001959-9976.796ENSOMEG00000020821ARF59976.796Oryzias_melastigma
ENSCSAVG00000001959-9974.033ENSOGAG00000013336ARF59974.033Otolemur_garnettii
ENSCSAVG00000001959-9974.033ENSPPAG00000037755ARF59974.033Pan_paniscus
ENSCSAVG00000001959-9974.033ENSPPRG00000004674ARF59974.033Panthera_pardus
ENSCSAVG00000001959-9974.033ENSPTRG00000019651ARF59974.033Pan_troglodytes
ENSCSAVG00000001959-9974.033ENSPANG00000032970ARF59974.033Papio_anubis
ENSCSAVG00000001959-9976.796ENSPKIG00000025381-9976.796Paramormyrops_kingsleyae
ENSCSAVG00000001959-9975.138ENSPKIG00000025349arf4a9975.138Paramormyrops_kingsleyae
ENSCSAVG00000001959-10075.824ENSPKIG00000013814-10075.824Paramormyrops_kingsleyae
ENSCSAVG00000001959-9975.691ENSPMGG00000009985-9975.691Periophthalmus_magnuspinnatus
ENSCSAVG00000001959-9974.033ENSPEMG00000021476Arf59974.033Peromyscus_maniculatus_bairdii
ENSCSAVG00000001959-9972.376ENSPMAG00000009600arf4a10072.376Petromyzon_marinus
ENSCSAVG00000001959-10073.077ENSPFOG00000017992-10073.077Poecilia_formosa
ENSCSAVG00000001959-9976.243ENSPFOG00000015817arf59976.243Poecilia_formosa
ENSCSAVG00000001959-9976.243ENSPLAG00000006742arf59976.243Poecilia_latipinna
ENSCSAVG00000001959-10073.077ENSPLAG00000015630-10073.077Poecilia_latipinna
ENSCSAVG00000001959-10073.077ENSPMEG00000004624-10073.077Poecilia_mexicana
ENSCSAVG00000001959-9976.243ENSPMEG00000009605arf59976.243Poecilia_mexicana
ENSCSAVG00000001959-9974.033ENSPCOG00000027640ARF59974.033Propithecus_coquereli
ENSCSAVG00000001959-9974.033ENSPVAG00000013940ARF59974.033Pteropus_vampyrus
ENSCSAVG00000001959-9976.243ENSPNYG00000001663arf59976.243Pundamilia_nyererei
ENSCSAVG00000001959-10074.725ENSPNYG00000004931-10074.725Pundamilia_nyererei
ENSCSAVG00000001959-9974.586ENSPNAG00000004745arf4a9974.586Pygocentrus_nattereri
ENSCSAVG00000001959-9971.271ENSPNAG00000005054-9971.271Pygocentrus_nattereri
ENSCSAVG00000001959-9977.901ENSPNAG00000024427-9977.901Pygocentrus_nattereri
ENSCSAVG00000001959-9962.983ENSPNAG00000004475-9962.983Pygocentrus_nattereri
ENSCSAVG00000001959-9974.033ENSRNOG00000007806Arf59974.033Rattus_norvegicus
ENSCSAVG00000001959-9974.033ENSRBIG00000039868ARF59974.033Rhinopithecus_bieti
ENSCSAVG00000001959-9974.033ENSRROG00000041157ARF59974.033Rhinopithecus_roxellana
ENSCSAVG00000001959-9974.033ENSSBOG00000021669ARF59974.033Saimiri_boliviensis_boliviensis
ENSCSAVG00000001959-9974.586ENSSHAG00000015053ARF59974.586Sarcophilus_harrisii
ENSCSAVG00000001959-9970.166ENSSFOG00015007701-9970.166Scleropages_formosus
ENSCSAVG00000001959-9976.796ENSSFOG00015020707ARF59976.796Scleropages_formosus
ENSCSAVG00000001959-10074.176ENSSMAG00000004541-10074.176Scophthalmus_maximus
ENSCSAVG00000001959-9976.243ENSSMAG00000011361arf59976.243Scophthalmus_maximus
ENSCSAVG00000001959-9976.243ENSSDUG00000005105arf59976.243Seriola_dumerili
ENSCSAVG00000001959-9976.243ENSSLDG00000017188arf59976.243Seriola_lalandi_dorsalis
ENSCSAVG00000001959-10075.275ENSSPAG00000022680-10075.275Stegastes_partitus
ENSCSAVG00000001959-9975.691ENSSPAG00000014434arf59975.691Stegastes_partitus
ENSCSAVG00000001959-9974.033ENSSSCG00000016593ARF59974.033Sus_scrofa
ENSCSAVG00000001959-9975.138ENSTRUG00000025462-10075.138Takifugu_rubripes
ENSCSAVG00000001959-9972.928ENSTNIG00000017954-10072.928Tetraodon_nigroviridis
ENSCSAVG00000001959-9977.348ENSTNIG00000003348arf510077.348Tetraodon_nigroviridis
ENSCSAVG00000001959-9076.074ENSTTRG00000006043ARF59976.074Tursiops_truncatus
ENSCSAVG00000001959-9974.033ENSUAMG00000012982ARF59974.033Ursus_americanus
ENSCSAVG00000001959-9974.033ENSVVUG00000007062ARF59974.033Vulpes_vulpes
ENSCSAVG00000001959-10073.077ENSXCOG00000020384-10073.077Xiphophorus_couchianus
ENSCSAVG00000001959-10073.077ENSXMAG00000004558-10073.077Xiphophorus_maculatus
ENSCSAVG00000001959-9976.243ENSXMAG00000015306arf59976.243Xiphophorus_maculatus

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