EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000002001 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
8654 bases
Position
chrreftig_107:367870-376523
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000003369RRM_1PF00076.222e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000003420-1017-ENSCSAVP00000003369168 (aa)-H2YDH1
Gene Model
Click here to download ENSCSAVG00000002001's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002001's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000002001-6838.525ENSCSAVG00000005996-5938.525
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000002001-9362.275ENSG00000258643BCL2L2-PABPN15360.674Homo_sapiens
ENSCSAVG00000002001-9362.275ENSG00000100836PABPN110060.674Homo_sapiens
ENSCSAVG00000002001-9361.677ENSAPOG00000016425pabpn17664.045Acanthochromis_polyacanthus
ENSCSAVG00000002001-9362.275ENSAMEG00000007048BCL2L2-PABPN19460.674Ailuropoda_melanoleuca
ENSCSAVG00000002001-9361.677ENSACIG00000021744pabpn110066.854Amphilophus_citrinellus
ENSCSAVG00000002001-9361.677ENSAOCG00000015805pabpn17664.045Amphiprion_ocellaris
ENSCSAVG00000002001-9361.677ENSAPEG00000009623pabpn17664.045Amphiprion_percula
ENSCSAVG00000002001-9361.677ENSATEG00000020531pabpn17664.045Anabas_testudineus
ENSCSAVG00000002001-9359.524ENSACAG00000006185-6360.894Anolis_carolinensis
ENSCSAVG00000002001-9362.275ENSANAG00000024513-6460.674Aotus_nancymaae
ENSCSAVG00000002001-9360.714ENSAMXG00000000452pabpn110064.804Astyanax_mexicanus
ENSCSAVG00000002001-9361.677ENSBTAG00000053753-6660.674Bos_taurus
ENSCSAVG00000002001-9359.236ENSBTAG00000050594-6256.897Bos_taurus
ENSCSAVG00000002001-9362.275ENSBTAG00000006884PABPN15860.674Bos_taurus
ENSCSAVG00000002001-7857.576WBGene00003904pabp-28451.724Caenorhabditis_elegans
ENSCSAVG00000002001-9362.275ENSCJAG00000007960-6660.674Callithrix_jacchus
ENSCSAVG00000002001-9361.078ENSCJAG00000004407-8959.551Callithrix_jacchus
ENSCSAVG00000002001-9362.275ENSCAFG00000011482PABPN15860.674Canis_familiaris
ENSCSAVG00000002001-9362.275ENSCAFG00020006651-5860.674Canis_lupus_dingo
ENSCSAVG00000002001-9362.275ENSCAFG00020007298-5860.674Canis_lupus_dingo
ENSCSAVG00000002001-9362.275ENSCHIG00000012184PABPN15860.674Capra_hircus
ENSCSAVG00000002001-9362.275ENSTSYG00000033996BCL2L2-PABPN110060.674Carlito_syrichta
ENSCSAVG00000002001-7961.364ENSCAPG00000009461-9461.364Cavia_aperea
ENSCSAVG00000002001-9361.677ENSCPOG00000025574PABPN15860.112Cavia_porcellus
ENSCSAVG00000002001-9362.275ENSCCAG00000033954BCL2L2-PABPN16660.674Cebus_capucinus
ENSCSAVG00000002001-9362.275ENSCATG00000038536BCL2L2-PABPN16660.674Cercocebus_atys
ENSCSAVG00000002001-8062.759ENSCLAG00000012423PABPN15459.310Chinchilla_lanigera
ENSCSAVG00000002001-9361.677ENSCSAG00000016036PABPN15860.112Chlorocebus_sabaeus
ENSCSAVG00000002001-9358.084ENSCHOG00000004798BCL2L2-PABPN17756.742Choloepus_hoffmanni
ENSCSAVG00000002001-9362.874ENSCPBG00000026060-10061.236Chrysemys_picta_bellii
ENSCSAVG00000002001-10090.476ENSCING00000012468-7490.476Ciona_intestinalis
ENSCSAVG00000002001-9354.491ENSCANG00000030980-6353.933Colobus_angolensis_palliatus
ENSCSAVG00000002001-9362.275ENSCANG00000009750BCL2L2-PABPN110060.674Colobus_angolensis_palliatus
ENSCSAVG00000002001-9361.677ENSCGRG00001019696Pabpn110060.112Cricetulus_griseus_chok1gshd
ENSCSAVG00000002001-9361.677ENSCGRG00000011102Pabpn110060.112Cricetulus_griseus_crigri
ENSCSAVG00000002001-9361.677ENSCSEG00000008774pabpn17664.607Cynoglossus_semilaevis
ENSCSAVG00000002001-9361.310ENSCVAG00000003152pabpn17662.570Cyprinodon_variegatus
ENSCSAVG00000002001-9361.078ENSDARG00000045373pabpn17666.292Danio_rerio
ENSCSAVG00000002001-9551.220ENSDARG00000087996pabpn1l7357.025Danio_rerio
ENSCSAVG00000002001-9362.275ENSDNOG00000023682PABPN15860.674Dasypus_novemcinctus
ENSCSAVG00000002001-9361.078ENSDORG00000028966-5859.551Dipodomys_ordii
ENSCSAVG00000002001-7960.606ENSDORG00000023928-9060.769Dipodomys_ordii
ENSCSAVG00000002001-10056.069FBgn0005648Pabp27653.179Drosophila_melanogaster
ENSCSAVG00000002001-10063.128ENSEBUG00000002322pabpn17763.128Eptatretus_burgeri
ENSCSAVG00000002001-9362.275ENSEASG00005011716PABPN15860.674Equus_asinus_asinus
ENSCSAVG00000002001-9261.212ENSECAG00000011652PABPN15662.424Equus_caballus
ENSCSAVG00000002001-9360.241ENSEEUG00000012973-6058.757Erinaceus_europaeus
ENSCSAVG00000002001-9359.524ENSELUG00000022654pabpn17560.335Esox_lucius
ENSCSAVG00000002001-9362.275ENSFCAG00000031922PABPN15860.674Felis_catus
ENSCSAVG00000002001-9361.078ENSFDAG00000018381BCL2L2-PABPN110059.551Fukomys_damarensis
ENSCSAVG00000002001-9362.048ENSFHEG00000007215pabpn17662.147Fundulus_heteroclitus
ENSCSAVG00000002001-9359.172ENSGALG00000052930-5259.218Gallus_gallus
ENSCSAVG00000002001-9360.355ENSGAFG00000017099pabpn17662.222Gambusia_affinis
ENSCSAVG00000002001-7770.992ENSGACG00000002167pabpn17758.549Gasterosteus_aculeatus
ENSCSAVG00000002001-9362.275ENSGGOG00000022683-6660.674Gorilla_gorilla
ENSCSAVG00000002001-9352.096ENSGGOG00000039675-6553.933Gorilla_gorilla
ENSCSAVG00000002001-9355.090ENSGGOG00000025919-9953.933Gorilla_gorilla
ENSCSAVG00000002001-9361.677ENSHBUG00000019523pabpn17666.854Haplochromis_burtoni
ENSCSAVG00000002001-9354.140ENSHGLG00000018588-5952.571Heterocephalus_glaber_female
ENSCSAVG00000002001-9361.677ENSHGLG00000002927-8267.692Heterocephalus_glaber_female
ENSCSAVG00000002001-9350.943ENSHGLG00000009842-10052.941Heterocephalus_glaber_female
ENSCSAVG00000002001-9357.485ENSHGLG00100018935-10057.303Heterocephalus_glaber_male
ENSCSAVG00000002001-9361.677ENSHGLG00100006673-10060.112Heterocephalus_glaber_male
ENSCSAVG00000002001-9354.140ENSHGLG00100015565-6052.571Heterocephalus_glaber_male
ENSCSAVG00000002001-9363.855ENSHCOG00000004655pabpn17665.537Hippocampus_comes
ENSCSAVG00000002001-9360.479ENSIPUG00000000180-7862.921Ictalurus_punctatus
ENSCSAVG00000002001-9361.078ENSIPUG00000008085PABPN17663.483Ictalurus_punctatus
ENSCSAVG00000002001-9362.275ENSSTOG00000029847BCL2L2-PABPN110060.674Ictidomys_tridecemlineatus
ENSCSAVG00000002001-9362.275ENSJJAG00000023507Gm2052110060.674Jaculus_jaculus
ENSCSAVG00000002001-9361.310ENSKMAG00000018748pabpn17665.556Kryptolebias_marmoratus
ENSCSAVG00000002001-9361.677ENSLBEG00000027266pabpn17664.045Labrus_bergylta
ENSCSAVG00000002001-7868.182ENSLACG00000000646pabpn15770.229Latimeria_chalumnae
ENSCSAVG00000002001-10055.556ENSLOCG00000004694pabpn1l8256.180Lepisosteus_oculatus
ENSCSAVG00000002001-8063.448ENSLAFG00000031227-9660.000Loxodonta_africana
ENSCSAVG00000002001-7857.447ENSMFAG00000031355-9957.447Macaca_fascicularis
ENSCSAVG00000002001-9362.275ENSMFAG00000032183BCL2L2-PABPN110060.674Macaca_fascicularis
ENSCSAVG00000002001-8057.931ENSMMUG00000048382-5953.591Macaca_mulatta
ENSCSAVG00000002001-9362.275ENSMMUG00000014747BCL2L2-PABPN19960.000Macaca_mulatta
ENSCSAVG00000002001-9452.976ENSMNEG00000035750-9957.447Macaca_nemestrina
ENSCSAVG00000002001-9362.275ENSMNEG00000045065BCL2L2-PABPN16660.674Macaca_nemestrina
ENSCSAVG00000002001-9362.275ENSMLEG00000043862BCL2L2-PABPN110060.674Mandrillus_leucophaeus
ENSCSAVG00000002001-9453.049ENSMLEG00000034623-9956.934Mandrillus_leucophaeus
ENSCSAVG00000002001-8068.889ENSMAMG00000007979pabpn16062.857Mastacembelus_armatus
ENSCSAVG00000002001-9361.677ENSMAUG00000007383Gm205216060.112Mesocricetus_auratus
ENSCSAVG00000002001-9362.275ENSMICG00000010002BCL2L2-PABPN16660.674Microcebus_murinus
ENSCSAVG00000002001-9361.677ENSMOCG00000018557Gm205217967.692Microtus_ochrogaster
ENSCSAVG00000002001-9361.677ENSMMOG00000005405pabpn17666.854Mola_mola
ENSCSAVG00000002001-9259.146ENSMODG00000004535-5858.857Monodelphis_domestica
ENSCSAVG00000002001-8068.889ENSMALG00000019612pabpn15962.857Monopterus_albus
ENSCSAVG00000002001-9361.677MGP_CAROLIEiJ_G0019276Gm205215360.112Mus_caroli
ENSCSAVG00000002001-9361.677MGP_CAROLIEiJ_G0019277Pabpn110060.112Mus_caroli
ENSCSAVG00000002001-9361.677ENSMUSG00000092232Gm205215360.112Mus_musculus
ENSCSAVG00000002001-9361.677ENSMUSG00000022194Pabpn110060.112Mus_musculus
ENSCSAVG00000002001-9361.677MGP_PahariEiJ_G0030294Gm205215360.112Mus_pahari
ENSCSAVG00000002001-9361.677MGP_PahariEiJ_G0030295Pabpn19878.049Mus_pahari
ENSCSAVG00000002001-9361.677MGP_SPRETEiJ_G0020166Pabpn110060.112Mus_spretus
ENSCSAVG00000002001-9361.677MGP_SPRETEiJ_G0020165Gm205215360.112Mus_spretus
ENSCSAVG00000002001-9261.039ENSMPUG00000006775-9862.424Mustela_putorius_furo
ENSCSAVG00000002001-8064.179ENSMLUG00000012452-5961.667Myotis_lucifugus
ENSCSAVG00000002001-10062.921ENSMLUG00000003800-9460.112Myotis_lucifugus
ENSCSAVG00000002001-9361.078ENSMLUG00000028677-6559.551Myotis_lucifugus
ENSCSAVG00000002001-9362.275ENSNGAG00000019529Gm205215360.674Nannospalax_galili
ENSCSAVG00000002001-9361.677ENSNBRG00000023955pabpn110066.854Neolamprologus_brichardi
ENSCSAVG00000002001-9362.275ENSNLEG00000015007-6360.674Nomascus_leucogenys
ENSCSAVG00000002001-9054.545ENSNLEG00000030598-6455.294Nomascus_leucogenys
ENSCSAVG00000002001-8048.980ENSNLEG00000035292-9748.980Nomascus_leucogenys
ENSCSAVG00000002001-9361.677ENSODEG00000002083BCL2L2-PABPN15860.112Octodon_degus
ENSCSAVG00000002001-9359.119ENSODEG00000003739-5959.412Octodon_degus
ENSCSAVG00000002001-10052.809ENSODEG00000011555-9551.685Octodon_degus
ENSCSAVG00000002001-8062.759ENSOANG00000009218-9960.000Ornithorhynchus_anatinus
ENSCSAVG00000002001-9361.677ENSOCUG00000016174PABPN16560.112Oryctolagus_cuniculus
ENSCSAVG00000002001-8068.889ENSORLG00000027900pabpn16561.272Oryzias_latipes
ENSCSAVG00000002001-8068.889ENSORLG00020004681pabpn15964.773Oryzias_latipes_hni
ENSCSAVG00000002001-9361.677ENSORLG00015000018pabpn17666.854Oryzias_latipes_hsok
ENSCSAVG00000002001-8068.889ENSOMEG00000016618pabpn15761.272Oryzias_melastigma
ENSCSAVG00000002001-9362.275ENSOGAG00000008710PABPN15860.674Otolemur_garnettii
ENSCSAVG00000002001-9362.275ENSPPAG00000028984BCL2L2-PABPN19862.424Pan_paniscus
ENSCSAVG00000002001-9352.695ENSPPAG00000039421-10054.494Pan_paniscus
ENSCSAVG00000002001-9362.275ENSPPRG00000010567PABPN15860.674Panthera_pardus
ENSCSAVG00000002001-9362.275ENSPTIG00000001063BCL2L2-PABPN110060.674Panthera_tigris_altaica
ENSCSAVG00000002001-9362.275ENSPTRG00000006167BCL2L26660.674Pan_troglodytes
ENSCSAVG00000002001-9350.898ENSPTRG00000047273-6552.809Pan_troglodytes
ENSCSAVG00000002001-9362.275ENSPANG00000021100BCL2L2-PABPN16660.674Papio_anubis
ENSCSAVG00000002001-9454.167ENSPANG00000023326-9958.156Papio_anubis
ENSCSAVG00000002001-9360.479ENSPKIG00000008144-5964.773Paramormyrops_kingsleyae
ENSCSAVG00000002001-9358.101ENSPKIG00000018052pabpn17660.894Paramormyrops_kingsleyae
ENSCSAVG00000002001-10054.118ENSPKIG00000008340pabpn1l8252.809Paramormyrops_kingsleyae
ENSCSAVG00000002001-6565.138ENSPSIG00000011959-7063.918Pelodiscus_sinensis
ENSCSAVG00000002001-8765.385ENSPMGG00000022027pabpn15661.272Periophthalmus_magnuspinnatus
ENSCSAVG00000002001-9361.677ENSPEMG00000008332Gm205217967.692Peromyscus_maniculatus_bairdii
ENSCSAVG00000002001-7770.000ENSPMAG00000006212pabpn17761.622Petromyzon_marinus
ENSCSAVG00000002001-9360.479ENSPCIG00000027751-5860.112Phascolarctos_cinereus
ENSCSAVG00000002001-7371.545ENSPFOG00000010351pabpn17562.222Poecilia_formosa
ENSCSAVG00000002001-7371.545ENSPLAG00000022696pabpn16061.017Poecilia_latipinna
ENSCSAVG00000002001-7371.545ENSPMEG00000020856pabpn17662.222Poecilia_mexicana
ENSCSAVG00000002001-7371.545ENSPREG00000011278pabpn17662.222Poecilia_reticulata
ENSCSAVG00000002001-9261.039ENSPPYG00000005663PABPN15962.424Pongo_abelii
ENSCSAVG00000002001-9248.718ENSPCAG00000005902PABPN15750.898Procavia_capensis
ENSCSAVG00000002001-9362.275ENSPCOG00000028047BCL2L2-PABPN16660.674Propithecus_coquereli
ENSCSAVG00000002001-9359.880ENSPVAG00000005270PABPN15861.236Pteropus_vampyrus
ENSCSAVG00000002001-9361.677ENSPNYG00000013182pabpn17666.854Pundamilia_nyererei
ENSCSAVG00000002001-10054.971ENSPNAG00000021666pabpn1l8454.971Pygocentrus_nattereri
ENSCSAVG00000002001-9361.078ENSPNAG00000023526pabpn17666.292Pygocentrus_nattereri
ENSCSAVG00000002001-9361.677ENSRNOG00000042195Pabpn15960.112Rattus_norvegicus
ENSCSAVG00000002001-9261.039ENSRBIG00000040762BCL2L2-PABPN15162.424Rhinopithecus_bieti
ENSCSAVG00000002001-9355.090ENSRBIG00000039547-6454.494Rhinopithecus_bieti
ENSCSAVG00000002001-9354.601ENSRBIG00000042811-7356.322Rhinopithecus_bieti
ENSCSAVG00000002001-9355.689ENSRROG00000040409-6455.056Rhinopithecus_roxellana
ENSCSAVG00000002001-9362.275ENSRROG00000045535BCL2L2-PABPN110060.674Rhinopithecus_roxellana
ENSCSAVG00000002001-9351.497ENSRROG00000036409-5352.247Rhinopithecus_roxellana
ENSCSAVG00000002001-9261.039ENSSBOG00000026930BCL2L2-PABPN19862.424Saimiri_boliviensis_boliviensis
ENSCSAVG00000002001-10052.809ENSSHAG00000007707-7552.809Sarcophilus_harrisii
ENSCSAVG00000002001-9360.479ENSSHAG00000014841-8260.112Sarcophilus_harrisii
ENSCSAVG00000002001-9360.479ENSSFOG00015014718pabpn17662.921Scleropages_formosus
ENSCSAVG00000002001-7760.000ENSSFOG00015015833pabpn1l6060.000Scleropages_formosus
ENSCSAVG00000002001-9361.078ENSSFOG00015012565pabpn17963.483Scleropages_formosus
ENSCSAVG00000002001-9361.677ENSSMAG00000020157pabpn17664.045Scophthalmus_maximus
ENSCSAVG00000002001-8068.889ENSSDUG00000020582pabpn15962.857Seriola_dumerili
ENSCSAVG00000002001-9361.677ENSSLDG00000007118pabpn17664.045Seriola_lalandi_dorsalis
ENSCSAVG00000002001-9359.880ENSSPUG00000018308-10061.798Sphenodon_punctatus
ENSCSAVG00000002001-9359.649ENSSPAG00000021658pabpn17667.039Stegastes_partitus
ENSCSAVG00000002001-6057.426ENSSSCG00000038472-7157.426Sus_scrofa
ENSCSAVG00000002001-9362.275ENSSSCG00000002023PABPN15860.674Sus_scrofa
ENSCSAVG00000002001-9951.497ENSSSCG00000034805-6650.898Sus_scrofa
ENSCSAVG00000002001-9360.479ENSTRUG00000023664pabpn17662.921Takifugu_rubripes
ENSCSAVG00000002001-8068.148ENSTNIG00000005369pabpn17160.694Tetraodon_nigroviridis
ENSCSAVG00000002001-9362.275ENSUAMG00000024460PABPN15860.674Ursus_americanus
ENSCSAVG00000002001-9362.275ENSUMAG00000014288BCL2L2-PABPN15360.674Ursus_maritimus
ENSCSAVG00000002001-9362.275ENSVVUG00000019912BCL2L2-PABPN17060.674Vulpes_vulpes
ENSCSAVG00000002001-9362.048ENSXETG00000014597pabpn16061.582Xenopus_tropicalis
ENSCSAVG00000002001-6075.248ENSXCOG00000005158pabpn19854.598Xiphophorus_couchianus
ENSCSAVG00000002001-7371.545ENSXMAG00000006196pabpn17662.222Xiphophorus_maculatus

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