EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000002027 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
13338 bases
Position
chrreftig_388:185922-199259
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000003405Prp19PF08606.112.5e-3311
ENSCSAVP00000003408Prp19PF08606.112.6e-3311
ENSCSAVP00000003406Prp19PF08606.112.7e-3311
ENSCSAVP00000003407Prp19PF08606.114.9e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000003457-1801-ENSCSAVP00000003405501 (aa)-H2YDK7
ENSCSAVT00000003460-1629-ENSCSAVP00000003408483 (aa)-H2YDL0
ENSCSAVT00000003458-1749-ENSCSAVP00000003406520 (aa)-H2YDK8
ENSCSAVT00000003459-1476-ENSCSAVP00000003407429 (aa)-H2YDK9
Gene Model
Click here to download ENSCSAVG00000002027's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002027's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000002027-5330.736ENSCSAVG00000011041-7130.736
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000002027-9968.452ENSG00000110107PRPF1910068.452Homo_sapiens
ENSCSAVG00000002027-10069.170ENSAPOG00000017823prpf1910068.775Acanthochromis_polyacanthus
ENSCSAVG00000002027-9868.008ENSAMEG00000007375PRPF199968.008Ailuropoda_melanoleuca
ENSCSAVG00000002027-9968.515ENSACIG00000015876prpf199968.515Amphilophus_citrinellus
ENSCSAVG00000002027-10069.170ENSAOCG00000020444prpf1910068.775Amphiprion_ocellaris
ENSCSAVG00000002027-10069.170ENSAPEG00000016076prpf1910068.775Amphiprion_percula
ENSCSAVG00000002027-10069.565ENSATEG00000008840prpf1910069.170Anabas_testudineus
ENSCSAVG00000002027-9969.048ENSACAG00000017797PRPF1910069.048Anolis_carolinensis
ENSCSAVG00000002027-9968.452ENSANAG00000021762PRPF1910068.452Aotus_nancymaae
ENSCSAVG00000002027-10069.565ENSACLG00000009416prpf1910069.170Astatotilapia_calliptera
ENSCSAVG00000002027-10070.659ENSAMXG00000011547prpf199970.659Astyanax_mexicanus
ENSCSAVG00000002027-9968.254ENSBTAG00000014366PRPF1910068.254Bos_taurus
ENSCSAVG00000002027-10050.797WBGene00020423prp-1910050.797Caenorhabditis_elegans
ENSCSAVG00000002027-9968.452ENSCJAG00000016509PRPF1910068.452Callithrix_jacchus
ENSCSAVG00000002027-9968.056ENSCAFG00000016438PRPF199868.056Canis_familiaris
ENSCSAVG00000002027-9968.056ENSCAFG00020012565PRPF1910068.056Canis_lupus_dingo
ENSCSAVG00000002027-9968.254ENSCHIG00000018281PRPF1910068.254Capra_hircus
ENSCSAVG00000002027-9968.072ENSTSYG00000006860PRPF199968.263Carlito_syrichta
ENSCSAVG00000002027-9967.936ENSCAPG00000016225PRPF1910068.563Cavia_aperea
ENSCSAVG00000002027-9968.452ENSCPOG00000020688PRPF1910068.452Cavia_porcellus
ENSCSAVG00000002027-9968.452ENSCCAG00000025839PRPF1910068.452Cebus_capucinus
ENSCSAVG00000002027-9968.452ENSCATG00000041921PRPF1910068.452Cercocebus_atys
ENSCSAVG00000002027-9968.072ENSCLAG00000003338PRPF1910068.563Chinchilla_lanigera
ENSCSAVG00000002027-9968.452ENSCSAG00000006254PRPF1910068.452Chlorocebus_sabaeus
ENSCSAVG00000002027-5568.317ENSCHOG00000005840PRPF1910057.878Choloepus_hoffmanni
ENSCSAVG00000002027-9968.254ENSCPBG00000027061PRPF1910068.254Chrysemys_picta_bellii
ENSCSAVG00000002027-8690.046ENSCING00000016625-9989.583Ciona_intestinalis
ENSCSAVG00000002027-9973.856ENSCANG00000027155PRPF195972.611Colobus_angolensis_palliatus
ENSCSAVG00000002027-9968.056ENSCGRG00001002699Prpf1910068.056Cricetulus_griseus_chok1gshd
ENSCSAVG00000002027-9967.460ENSCGRG00000008964Prpf1910067.460Cricetulus_griseus_crigri
ENSCSAVG00000002027-10069.505ENSCSEG00000010411prpf1910069.109Cynoglossus_semilaevis
ENSCSAVG00000002027-9968.911ENSCVAG00000012011prpf1910069.170Cyprinodon_variegatus
ENSCSAVG00000002027-10070.060ENSDARG00000015239prpf199970.060Danio_rerio
ENSCSAVG00000002027-9968.452ENSDNOG00000005797PRPF1910068.452Dasypus_novemcinctus
ENSCSAVG00000002027-9968.452ENSDORG00000006906Prpf1910068.452Dipodomys_ordii
ENSCSAVG00000002027-10064.103FBgn0261119Prp199966.866Drosophila_melanogaster
ENSCSAVG00000002027-9969.737ENSETEG00000012295PRPF198869.737Echinops_telfairi
ENSCSAVG00000002027-8368.258ENSEBUG00000013075prpf1910068.258Eptatretus_burgeri
ENSCSAVG00000002027-9368.856ENSEASG00005008056PRPF199768.856Equus_asinus_asinus
ENSCSAVG00000002027-9968.254ENSECAG00000007322PRPF1910068.254Equus_caballus
ENSCSAVG00000002027-10069.216ENSELUG00000020276-10069.246Esox_lucius
ENSCSAVG00000002027-9965.020ENSELUG00000004578prpf1910065.020Esox_lucius
ENSCSAVG00000002027-9968.056ENSFCAG00000013668PRPF1910068.056Felis_catus
ENSCSAVG00000002027-9967.857ENSFALG00000012084PRPF1910067.857Ficedula_albicollis
ENSCSAVG00000002027-8368.009ENSFDAG00000009420PRPF199668.563Fukomys_damarensis
ENSCSAVG00000002027-9969.368ENSFHEG00000022135prpf1910068.972Fundulus_heteroclitus
ENSCSAVG00000002027-9970.949ENSGMOG00000014756prpf1910070.297Gadus_morhua
ENSCSAVG00000002027-9968.056ENSGALG00000036530PRPF1910068.056Gallus_gallus
ENSCSAVG00000002027-9969.368ENSGAFG00000008931prpf1910068.775Gambusia_affinis
ENSCSAVG00000002027-10068.972ENSGACG00000017976prpf1910068.775Gasterosteus_aculeatus
ENSCSAVG00000002027-9968.452ENSGAGG00000013328PRPF1910068.452Gopherus_agassizii
ENSCSAVG00000002027-10069.307ENSGGOG00000008648PRPF1910068.452Gorilla_gorilla
ENSCSAVG00000002027-10069.565ENSHBUG00000008394prpf1910069.170Haplochromis_burtoni
ENSCSAVG00000002027-9968.452ENSHGLG00000003934PRPF1910068.452Heterocephalus_glaber_female
ENSCSAVG00000002027-9855.131ENSHGLG00100010649PRPF1910051.710Heterocephalus_glaber_male
ENSCSAVG00000002027-10068.515ENSHCOG00000016720prpf1910068.515Hippocampus_comes
ENSCSAVG00000002027-10068.775ENSIPUG00000013084prpf199969.760Ictalurus_punctatus
ENSCSAVG00000002027-9968.452ENSSTOG00000001598PRPF1910068.452Ictidomys_tridecemlineatus
ENSCSAVG00000002027-9968.254ENSJJAG00000020609Prpf1910068.254Jaculus_jaculus
ENSCSAVG00000002027-9969.368ENSKMAG00000010257prpf1910068.972Kryptolebias_marmoratus
ENSCSAVG00000002027-9969.307ENSLBEG00000027436prpf1910068.713Labrus_bergylta
ENSCSAVG00000002027-9969.643ENSLACG00000003434PRPF199970.659Latimeria_chalumnae
ENSCSAVG00000002027-9161.325ENSLOCG00000008123prpf1910061.111Lepisosteus_oculatus
ENSCSAVG00000002027-9965.835ENSLAFG00000002644PRPF199968.263Loxodonta_africana
ENSCSAVG00000002027-9968.452ENSMFAG00000036743PRPF1910068.452Macaca_fascicularis
ENSCSAVG00000002027-9968.452ENSMMUG00000014530PRPF1910068.452Macaca_mulatta
ENSCSAVG00000002027-9968.452ENSMNEG00000044485PRPF1910068.452Macaca_nemestrina
ENSCSAVG00000002027-9968.452ENSMLEG00000043312PRPF1910068.452Mandrillus_leucophaeus
ENSCSAVG00000002027-10068.972ENSMAMG00000006843prpf1910068.577Mastacembelus_armatus
ENSCSAVG00000002027-10069.565ENSMZEG00005013356prpf1910069.170Maylandia_zebra
ENSCSAVG00000002027-9566.186ENSMGAG00000003180PRPF1910065.281Meleagris_gallopavo
ENSCSAVG00000002027-9967.262ENSMAUG00000012585Prpf1910067.262Mesocricetus_auratus
ENSCSAVG00000002027-9968.452ENSMICG00000011236PRPF1910068.452Microcebus_murinus
ENSCSAVG00000002027-9968.056ENSMOCG00000010383Prpf1910068.056Microtus_ochrogaster
ENSCSAVG00000002027-10069.643ENSMMOG00000003138prpf1910069.246Mola_mola
ENSCSAVG00000002027-9968.849ENSMODG00000020338PRPF1910068.849Monodelphis_domestica
ENSCSAVG00000002027-9963.301ENSMALG00000010981prpf199962.913Monopterus_albus
ENSCSAVG00000002027-9968.056MGP_CAROLIEiJ_G0022704Prpf1910068.056Mus_caroli
ENSCSAVG00000002027-9968.056ENSMUSG00000024735Prpf1910068.056Mus_musculus
ENSCSAVG00000002027-9968.056MGP_PahariEiJ_G0014198Prpf1910068.056Mus_pahari
ENSCSAVG00000002027-9968.056MGP_SPRETEiJ_G0023618Prpf1910068.056Mus_spretus
ENSCSAVG00000002027-9968.056ENSMPUG00000014432PRPF1910068.056Mustela_putorius_furo
ENSCSAVG00000002027-9965.511ENSMLUG00000017597PRPF199967.964Myotis_lucifugus
ENSCSAVG00000002027-9968.254ENSNGAG00000012671Prpf1910068.254Nannospalax_galili
ENSCSAVG00000002027-10069.565ENSNBRG00000000055prpf1910069.170Neolamprologus_brichardi
ENSCSAVG00000002027-9968.452ENSNLEG00000013618PRPF1910068.452Nomascus_leucogenys
ENSCSAVG00000002027-9865.996ENSOPRG00000008630PRPF1910065.996Ochotona_princeps
ENSCSAVG00000002027-9968.651ENSODEG00000004043PRPF1910068.651Octodon_degus
ENSCSAVG00000002027-10069.565ENSONIG00000004880prpf1910069.170Oreochromis_niloticus
ENSCSAVG00000002027-9965.714ENSOCUG00000015689PRPF199968.563Oryctolagus_cuniculus
ENSCSAVG00000002027-10069.170ENSORLG00000004666prpf1910068.775Oryzias_latipes
ENSCSAVG00000002027-10069.170ENSORLG00020013561prpf1910068.775Oryzias_latipes_hni
ENSCSAVG00000002027-10069.170ENSORLG00015022196prpf1910068.775Oryzias_latipes_hsok
ENSCSAVG00000002027-10068.713ENSOMEG00000004424prpf1910068.577Oryzias_melastigma
ENSCSAVG00000002027-9968.452ENSOGAG00000016756PRPF1910068.452Otolemur_garnettii
ENSCSAVG00000002027-9968.254ENSOARG00000015596PRPF1910068.254Ovis_aries
ENSCSAVG00000002027-9967.387ENSPPAG00000030246PRPF199968.563Pan_paniscus
ENSCSAVG00000002027-9968.056ENSPPRG00000002470PRPF1910068.056Panthera_pardus
ENSCSAVG00000002027-9867.807ENSPTIG00000006541PRPF199967.964Panthera_tigris_altaica
ENSCSAVG00000002027-9968.452ENSPTRG00000003724PRPF1910068.452Pan_troglodytes
ENSCSAVG00000002027-9968.452ENSPANG00000002762PRPF1910068.452Papio_anubis
ENSCSAVG00000002027-10068.379ENSPKIG00000019715prpf199969.461Paramormyrops_kingsleyae
ENSCSAVG00000002027-8367.780ENSPSIG00000007497PRPF1910068.263Pelodiscus_sinensis
ENSCSAVG00000002027-10069.565ENSPMGG00000017527prpf1910069.522Periophthalmus_magnuspinnatus
ENSCSAVG00000002027-9967.460ENSPEMG00000019270Prpf1910067.460Peromyscus_maniculatus_bairdii
ENSCSAVG00000002027-9268.951ENSPCIG00000003485PRPF197969.868Phascolarctos_cinereus
ENSCSAVG00000002027-9969.368ENSPFOG00000002558prpf1910068.972Poecilia_formosa
ENSCSAVG00000002027-9969.368ENSPLAG00000017942prpf1910068.972Poecilia_latipinna
ENSCSAVG00000002027-9969.368ENSPMEG00000008638prpf1910068.972Poecilia_mexicana
ENSCSAVG00000002027-8769.615ENSPREG00000002489prpf199669.161Poecilia_reticulata
ENSCSAVG00000002027-9468.922ENSPPYG00000003202PRPF199068.922Pongo_abelii
ENSCSAVG00000002027-9968.056ENSPCAG00000001930PRPF1910068.056Procavia_capensis
ENSCSAVG00000002027-9369.068ENSPCOG00000014017PRPF1910069.068Propithecus_coquereli
ENSCSAVG00000002027-9968.056ENSPVAG00000014669PRPF1910068.056Pteropus_vampyrus
ENSCSAVG00000002027-10069.565ENSPNYG00000000859prpf1910069.170Pundamilia_nyererei
ENSCSAVG00000002027-10070.158ENSPNAG00000019245prpf199971.257Pygocentrus_nattereri
ENSCSAVG00000002027-9968.056ENSRNOG00000020897Prpf1910068.056Rattus_norvegicus
ENSCSAVG00000002027-9969.000ENSRBIG00000036672PRPF1910068.452Rhinopithecus_bieti
ENSCSAVG00000002027-9969.000ENSRROG00000041572PRPF1910068.452Rhinopithecus_roxellana
ENSCSAVG00000002027-9968.452ENSSBOG00000022840PRPF1910068.452Saimiri_boliviensis_boliviensis
ENSCSAVG00000002027-9968.651ENSSHAG00000009462PRPF1910068.651Sarcophilus_harrisii
ENSCSAVG00000002027-10068.775ENSSFOG00015001236prpf1910068.775Scleropages_formosus
ENSCSAVG00000002027-9969.565ENSSMAG00000002273prpf1910069.170Scophthalmus_maximus
ENSCSAVG00000002027-10069.565ENSSDUG00000003299prpf1910069.170Seriola_dumerili
ENSCSAVG00000002027-10069.565ENSSLDG00000003019prpf1910069.170Seriola_lalandi_dorsalis
ENSCSAVG00000002027-9968.452ENSSPUG00000019328PRPF1910068.452Sphenodon_punctatus
ENSCSAVG00000002027-10069.368ENSSPAG00000008546prpf1910068.972Stegastes_partitus
ENSCSAVG00000002027-9968.452ENSSSCG00000013107PRPF1910068.452Sus_scrofa
ENSCSAVG00000002027-9968.056ENSTGUG00000006319PRPF1910068.056Taeniopygia_guttata
ENSCSAVG00000002027-10069.505ENSTRUG00000008502prpf199970.958Takifugu_rubripes
ENSCSAVG00000002027-10067.898ENSTNIG00000014219prpf199967.898Tetraodon_nigroviridis
ENSCSAVG00000002027-9968.056ENSTTRG00000012476PRPF1910068.056Tursiops_truncatus
ENSCSAVG00000002027-9968.056ENSUAMG00000011280PRPF1910068.056Ursus_americanus
ENSCSAVG00000002027-8367.299ENSUMAG00000011609PRPF198367.665Ursus_maritimus
ENSCSAVG00000002027-9068.282ENSVPAG00000010516PRPF1910069.072Vicugna_pacos
ENSCSAVG00000002027-9968.056ENSVVUG00000005291PRPF1910068.056Vulpes_vulpes
ENSCSAVG00000002027-8768.337ENSXETG00000011938prpf199969.145Xenopus_tropicalis
ENSCSAVG00000002027-9969.170ENSXCOG00000003141prpf1910068.775Xiphophorus_couchianus
ENSCSAVG00000002027-9969.368ENSXMAG00000008485prpf1910068.972Xiphophorus_maculatus

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