EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7067 bases
Position: chrreftig_304:57580-64646
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003409	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003462	-	727	-	ENSCSAVP00000003410	228 (aa)	-	H2YDL2
ENSCSAVT00000003461	-	2103	-	ENSCSAVP00000003409	701 (aa)	-	H2YDL1

Gene Model

Click here to download ENSCSAVG00000002028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002028	-	99	43.065	ENSG00000258366	RTEL1	96	42.899	Homo_sapiens
ENSCSAVG00000002028	-	77	30.605	ENSG00000104884	ERCC2	71	30.605	Homo_sapiens
ENSCSAVG00000002028	-	99	42.819	ENSAMEG00000001689	-	56	42.951	Ailuropoda_melanoleuca
ENSCSAVG00000002028	-	84	49.123	ENSCJAG00000001292	BRIP1	67	49.123	Callithrix_jacchus
ENSCSAVG00000002028	-	99	43.254	ENSCAFG00020001919	-	57	43.519	Canis_lupus_dingo
ENSCSAVG00000002028	-	76	50.877	ENSCCAG00000024685	BRIP1	56	50.877	Cebus_capucinus
ENSCSAVG00000002028	-	96	49.123	ENSCATG00000041725	BRIP1	56	49.123	Cercocebus_atys
ENSCSAVG00000002028	-	99	43.461	ENSCATG00000013982	-	56	43.461	Cercocebus_atys
ENSCSAVG00000002028	-	99	43.009	ENSCLAG00000005519	-	62	43.009	Chinchilla_lanigera
ENSCSAVG00000002028	-	99	44.126	ENSDORG00000013483	Rtel1	67	44.126	Dipodomys_ordii
ENSCSAVG00000002028	-	99	44.459	ENSEASG00005023163	-	65	42.237	Equus_asinus_asinus
ENSCSAVG00000002028	-	99	44.122	ENSECAG00000021707	-	66	44.122	Equus_caballus
ENSCSAVG00000002028	-	87	45.333	ENSECAG00000024392	BRIP1	67	45.333	Equus_caballus
ENSCSAVG00000002028	-	99	35.462	ENSGGOG00000042405	RTEL1	59	34.953	Gorilla_gorilla
ENSCSAVG00000002028	-	99	42.629	ENSHGLG00000005511	-	59	42.629	Heterocephalus_glaber_female
ENSCSAVG00000002028	-	99	42.629	ENSHGLG00100002438	-	59	42.629	Heterocephalus_glaber_male
ENSCSAVG00000002028	-	99	40.927	ENSLAFG00000021665	-	59	40.927	Loxodonta_africana
ENSCSAVG00000002028	-	99	42.933	ENSMFAG00000043680	-	56	42.933	Macaca_fascicularis
ENSCSAVG00000002028	-	99	42.781	ENSMMUG00000000167	-	57	42.517	Macaca_mulatta
ENSCSAVG00000002028	-	89	49.123	ENSMNEG00000040728	BRIP1	61	49.123	Macaca_nemestrina
ENSCSAVG00000002028	-	60	31.724	ENSMMOG00000005162	ercc2	58	31.724	Mola_mola
ENSCSAVG00000002028	-	99	34.868	ENSPPAG00000033509	-	58	34.868	Pan_paniscus
ENSCSAVG00000002028	-	99	30.876	ENSPTRG00000048787	-	57	30.876	Pan_troglodytes
ENSCSAVG00000002028	-	99	42.933	ENSPANG00000020635	-	56	42.933	Papio_anubis
ENSCSAVG00000002028	-	89	30.345	ENSPKIG00000006883	ercc2	89	30.345	Paramormyrops_kingsleyae
ENSCSAVG00000002028	-	52	41.935	ENSPMAG00000008098	-	99	41.935	Petromyzon_marinus
ENSCSAVG00000002028	-	99	42.562	ENSPCIG00000017939	-	59	42.562	Phascolarctos_cinereus
ENSCSAVG00000002028	-	89	31.034	ENSPREG00000019280	ercc2	91	31.034	Poecilia_reticulata
ENSCSAVG00000002028	-	99	42.147	ENSPCOG00000013374	-	58	42.147	Propithecus_coquereli
ENSCSAVG00000002028	-	99	42.688	ENSRNOG00000027513	Rtel1	58	42.688	Rattus_norvegicus
ENSCSAVG00000002028	-	99	43.140	ENSRROG00000038795	-	57	43.140	Rhinopithecus_roxellana
ENSCSAVG00000002028	-	86	49.123	ENSSBOG00000035665	BRIP1	60	49.123	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002028	-	89	31.724	ENSSPAG00000002074	ercc2	91	31.724	Stegastes_partitus
ENSCSAVG00000002028	-	99	43.692	ENSUAMG00000009334	-	69	43.692	Ursus_americanus
ENSCSAVG00000002028	-	99	44.508	ENSUMAG00000022059	-	63	44.508	Ursus_maritimus
ENSCSAVG00000002028	-	99	42.781	ENSVVUG00000015049	-	61	42.781	Vulpes_vulpes