EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002029 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1941 bases
Position: chrreftig_234:254424-256364
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003411	DUF382	PF04037.13	1.8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003463	-	1878	-	ENSCSAVP00000003411	625 (aa)	-	H2YDL3

Gene Model

Click here to download ENSCSAVG00000002029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002029	-	99	59.779	ENSG00000087365	SF3B2	99	68.750	Homo_sapiens
ENSCSAVG00000002029	-	80	67.921	ENSAPOG00000001974	sf3b2	57	67.594	Acanthochromis_polyacanthus
ENSCSAVG00000002029	-	99	58.529	ENSAMEG00000017206	SF3B2	70	59.781	Ailuropoda_melanoleuca
ENSCSAVG00000002029	-	99	60.032	ENSACIG00000000624	sf3b2	72	61.146	Amphilophus_citrinellus
ENSCSAVG00000002029	-	84	66.856	ENSAOCG00000009207	sf3b2	61	66.855	Amphiprion_ocellaris
ENSCSAVG00000002029	-	99	59.652	ENSAPEG00000002762	sf3b2	61	66.667	Amphiprion_percula
ENSCSAVG00000002029	-	99	50.464	ENSACAG00000008615	SF3B2	71	51.163	Anolis_carolinensis
ENSCSAVG00000002029	-	99	59.779	ENSANAG00000029120	SF3B2	71	60.563	Aotus_nancymaae
ENSCSAVG00000002029	-	99	58.786	ENSACLG00000014771	sf3b2	74	60.577	Astatotilapia_calliptera
ENSCSAVG00000002029	-	83	67.878	ENSAMXG00000007929	sf3b2	76	66.728	Astyanax_mexicanus
ENSCSAVG00000002029	-	99	59.248	ENSBTAG00000002778	SF3B2	70	60.031	Bos_taurus
ENSCSAVG00000002029	-	84	49.546	WBGene00021004	sftb-2	89	49.546	Caenorhabditis_elegans
ENSCSAVG00000002029	-	99	59.779	ENSCJAG00000001656	SF3B2	71	60.563	Callithrix_jacchus
ENSCSAVG00000002029	-	99	58.621	ENSCAFG00000013033	SF3B2	70	59.875	Canis_familiaris
ENSCSAVG00000002029	-	99	58.621	ENSCAFG00020015382	SF3B2	70	59.875	Canis_lupus_dingo
ENSCSAVG00000002029	-	99	59.091	ENSCHIG00000011211	SF3B2	70	59.875	Capra_hircus
ENSCSAVG00000002029	-	99	59.621	ENSTSYG00000000959	SF3B2	61	67.225	Carlito_syrichta
ENSCSAVG00000002029	-	55	68.908	ENSCAPG00000006065	SF3B2	68	69.748	Cavia_aperea
ENSCSAVG00000002029	-	85	59.963	ENSCPOG00000008294	SF3B2	68	60.474	Cavia_porcellus
ENSCSAVG00000002029	-	99	59.779	ENSCCAG00000035256	SF3B2	71	60.563	Cebus_capucinus
ENSCSAVG00000002029	-	99	59.779	ENSCATG00000042240	SF3B2	72	60.754	Cercocebus_atys
ENSCSAVG00000002029	-	99	59.528	ENSCLAG00000016852	SF3B2	71	60.502	Chinchilla_lanigera
ENSCSAVG00000002029	-	99	59.779	ENSCSAG00000008121	SF3B2	70	60.440	Chlorocebus_sabaeus
ENSCSAVG00000002029	-	72	66.409	ENSCHOG00000001476	SF3B2	51	66.795	Choloepus_hoffmanni
ENSCSAVG00000002029	-	99	60.987	ENSCPBG00000022465	SF3B2	86	61.331	Chrysemys_picta_bellii
ENSCSAVG00000002029	-	100	86.146	ENSCING00000005665	-	99	85.646	Ciona_intestinalis
ENSCSAVG00000002029	-	99	59.779	ENSCANG00000039680	SF3B2	71	60.440	Colobus_angolensis_palliatus
ENSCSAVG00000002029	-	99	58.621	ENSCGRG00001015741	Sf3b2	71	60.250	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002029	-	99	58.621	ENSCGRG00000018110	Sf3b2	74	60.250	Cricetulus_griseus_crigri
ENSCSAVG00000002029	-	83	66.667	ENSCSEG00000000230	sf3b2	78	60.032	Cynoglossus_semilaevis
ENSCSAVG00000002029	-	84	66.352	ENSCVAG00000003357	sf3b2	74	60.191	Cyprinodon_variegatus
ENSCSAVG00000002029	-	84	67.669	ENSDARG00000018049	sf3b2	65	68.224	Danio_rerio
ENSCSAVG00000002029	-	84	66.108	ENSDNOG00000009484	SF3B2	79	60.472	Dasypus_novemcinctus
ENSCSAVG00000002029	-	99	60.220	ENSDORG00000002495	Sf3b2	71	59.875	Dipodomys_ordii
ENSCSAVG00000002029	-	84	65.730	ENSEBUG00000013703	sf3b2	58	67.664	Eptatretus_burgeri
ENSCSAVG00000002029	-	99	59.810	ENSEASG00005004508	SF3B2	70	60.601	Equus_asinus_asinus
ENSCSAVG00000002029	-	99	59.810	ENSECAG00000024461	SF3B2	70	60.601	Equus_caballus
ENSCSAVG00000002029	-	84	67.932	ENSELUG00000005586	sf3b2	63	68.037	Esox_lucius
ENSCSAVG00000002029	-	99	58.621	ENSFCAG00000013289	SF3B2	71	59.875	Felis_catus
ENSCSAVG00000002029	-	99	57.348	ENSFALG00000014653	SF3B2	89	57.508	Ficedula_albicollis
ENSCSAVG00000002029	-	99	59.621	ENSFDAG00000019806	SF3B2	70	60.597	Fukomys_damarensis
ENSCSAVG00000002029	-	84	66.919	ENSFHEG00000020968	sf3b2	62	66.792	Fundulus_heteroclitus
ENSCSAVG00000002029	-	84	67.358	ENSGMOG00000012131	sf3b2	82	67.603	Gadus_morhua
ENSCSAVG00000002029	-	84	67.864	ENSGAFG00000001675	sf3b2	62	67.669	Gambusia_affinis
ENSCSAVG00000002029	-	84	66.290	ENSGACG00000019012	sf3b2	81	66.105	Gasterosteus_aculeatus
ENSCSAVG00000002029	-	99	60.759	ENSGAGG00000023916	SF3B2	73	61.392	Gopherus_agassizii
ENSCSAVG00000002029	-	99	59.779	ENSGGOG00000028448	SF3B2	67	69.553	Gorilla_gorilla
ENSCSAVG00000002029	-	99	59.742	ENSHBUG00000017349	sf3b2	74	60.737	Haplochromis_burtoni
ENSCSAVG00000002029	-	99	59.685	ENSHGLG00000010807	SF3B2	71	60.658	Heterocephalus_glaber_female
ENSCSAVG00000002029	-	99	59.685	ENSHGLG00100006361	SF3B2	71	60.658	Heterocephalus_glaber_male
ENSCSAVG00000002029	-	84	67.045	ENSHCOG00000016203	sf3b2	62	67.045	Hippocampus_comes
ENSCSAVG00000002029	-	84	66.041	ENSIPUG00000009383	sf3b2	62	66.480	Ictalurus_punctatus
ENSCSAVG00000002029	-	99	58.934	ENSSTOG00000028892	SF3B2	71	60.630	Ictidomys_tridecemlineatus
ENSCSAVG00000002029	-	99	60.000	ENSJJAG00000018193	Sf3b2	71	60.407	Jaculus_jaculus
ENSCSAVG00000002029	-	84	66.919	ENSKMAG00000020181	sf3b2	63	65.930	Kryptolebias_marmoratus
ENSCSAVG00000002029	-	83	68.451	ENSLBEG00000027739	sf3b2	88	62.158	Labrus_bergylta
ENSCSAVG00000002029	-	86	66.000	ENSLACG00000010429	SF3B2	70	61.076	Latimeria_chalumnae
ENSCSAVG00000002029	-	99	58.777	ENSLAFG00000002128	SF3B2	61	67.039	Loxodonta_africana
ENSCSAVG00000002029	-	99	59.685	ENSMFAG00000003064	SF3B2	72	60.658	Macaca_fascicularis
ENSCSAVG00000002029	-	99	56.309	ENSMMUG00000011743	SF3B2	71	56.515	Macaca_mulatta
ENSCSAVG00000002029	-	99	59.779	ENSMNEG00000034437	SF3B2	72	60.754	Macaca_nemestrina
ENSCSAVG00000002029	-	99	59.779	ENSMLEG00000029373	SF3B2	72	60.440	Mandrillus_leucophaeus
ENSCSAVG00000002029	-	84	66.667	ENSMAMG00000014103	sf3b2	72	59.937	Mastacembelus_armatus
ENSCSAVG00000002029	-	99	58.786	ENSMZEG00005020789	sf3b2	73	60.577	Maylandia_zebra
ENSCSAVG00000002029	-	60	66.048	ENSMAUG00000017040	Sf3b2	67	67.109	Mesocricetus_auratus
ENSCSAVG00000002029	-	99	58.983	ENSMICG00000016942	-	74	60.063	Microcebus_murinus
ENSCSAVG00000002029	-	84	66.108	ENSMICG00000008565	-	61	67.039	Microcebus_murinus
ENSCSAVG00000002029	-	99	58.934	ENSMOCG00000003136	Sf3b2	71	60.630	Microtus_ochrogaster
ENSCSAVG00000002029	-	83	67.048	ENSMMOG00000012928	sf3b2	62	67.232	Mola_mola
ENSCSAVG00000002029	-	99	57.480	ENSMODG00000025020	-	99	58.320	Monodelphis_domestica
ENSCSAVG00000002029	-	85	65.328	ENSMODG00000008490	-	67	66.241	Monodelphis_domestica
ENSCSAVG00000002029	-	99	58.019	ENSMALG00000015137	sf3b2	62	66.290	Monopterus_albus
ENSCSAVG00000002029	-	99	59.810	MGP_CAROLIEiJ_G0022539	Sf3b2	71	60.787	Mus_caroli
ENSCSAVG00000002029	-	84	66.294	ENSMUSG00000024853	Sf3b2	61	67.225	Mus_musculus
ENSCSAVG00000002029	-	99	58.934	MGP_PahariEiJ_G0014036	Sf3b2	71	60.250	Mus_pahari
ENSCSAVG00000002029	-	84	66.294	MGP_SPRETEiJ_G0023453	Sf3b2	61	67.225	Mus_spretus
ENSCSAVG00000002029	-	99	58.621	ENSMPUG00000011349	SF3B2	70	59.875	Mustela_putorius_furo
ENSCSAVG00000002029	-	99	59.464	ENSMLUG00000011136	SF3B2	59	67.039	Myotis_lucifugus
ENSCSAVG00000002029	-	84	66.108	ENSNGAG00000012103	Sf3b2	72	60.472	Nannospalax_galili
ENSCSAVG00000002029	-	99	57.342	ENSNLEG00000006007	SF3B2	60	65.177	Nomascus_leucogenys
ENSCSAVG00000002029	-	72	63.866	ENSMEUG00000000019	SF3B2	54	64.986	Notamacropus_eugenii
ENSCSAVG00000002029	-	99	57.098	ENSODEG00000017764	SF3B2	71	57.233	Octodon_degus
ENSCSAVG00000002029	-	84	67.045	ENSONIG00000013068	sf3b2	64	65.636	Oreochromis_niloticus
ENSCSAVG00000002029	-	72	69.623	ENSOANG00000012482	SF3B2	58	69.845	Ornithorhynchus_anatinus
ENSCSAVG00000002029	-	99	58.934	ENSOCUG00000015722	-	74	60.031	Oryctolagus_cuniculus
ENSCSAVG00000002029	-	66	41.766	ENSOCUG00000024154	-	59	46.440	Oryctolagus_cuniculus
ENSCSAVG00000002029	-	99	59.744	ENSORLG00000008235	sf3b2	72	60.703	Oryzias_latipes
ENSCSAVG00000002029	-	99	59.744	ENSORLG00020005357	sf3b2	74	60.640	Oryzias_latipes_hni
ENSCSAVG00000002029	-	99	59.744	ENSORLG00015022454	sf3b2	75	67.542	Oryzias_latipes_hsok
ENSCSAVG00000002029	-	84	66.353	ENSOMEG00000017480	sf3b2	74	60.925	Oryzias_melastigma
ENSCSAVG00000002029	-	84	66.294	ENSOGAG00000005799	SF3B2	60	67.225	Otolemur_garnettii
ENSCSAVG00000002029	-	99	59.091	ENSOARG00000002125	SF3B2	85	59.404	Ovis_aries
ENSCSAVG00000002029	-	99	59.779	ENSPPAG00000007359	SF3B2	71	60.440	Pan_paniscus
ENSCSAVG00000002029	-	99	58.621	ENSPPRG00000013334	SF3B2	71	59.875	Panthera_pardus
ENSCSAVG00000002029	-	99	58.621	ENSPTIG00000015022	SF3B2	71	59.875	Panthera_tigris_altaica
ENSCSAVG00000002029	-	99	59.779	ENSPTRG00000003912	SF3B2	71	60.440	Pan_troglodytes
ENSCSAVG00000002029	-	99	59.779	ENSPANG00000008593	SF3B2	72	60.754	Papio_anubis
ENSCSAVG00000002029	-	84	67.797	ENSPKIG00000016576	sf3b2	75	67.985	Paramormyrops_kingsleyae
ENSCSAVG00000002029	-	99	61.224	ENSPSIG00000003158	SF3B2	82	61.792	Pelodiscus_sinensis
ENSCSAVG00000002029	-	84	63.364	ENSPMGG00000000819	sf3b2	63	63.653	Periophthalmus_magnuspinnatus
ENSCSAVG00000002029	-	84	61.381	ENSPEMG00000015451	-	68	62.570	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002029	-	84	66.294	ENSPEMG00000015437	Sf3b2	71	60.630	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002029	-	84	66.294	ENSPCIG00000008381	SF3B2	62	67.225	Phascolarctos_cinereus
ENSCSAVG00000002029	-	84	66.919	ENSPFOG00000002552	sf3b2	62	66.790	Poecilia_formosa
ENSCSAVG00000002029	-	84	66.919	ENSPLAG00000001471	sf3b2	62	67.481	Poecilia_latipinna
ENSCSAVG00000002029	-	84	66.415	ENSPMEG00000013180	sf3b2	62	66.419	Poecilia_mexicana
ENSCSAVG00000002029	-	84	67.108	ENSPREG00000002665	sf3b2	62	67.669	Poecilia_reticulata
ENSCSAVG00000002029	-	99	59.937	ENSPCAG00000005129	SF3B2	70	60.188	Procavia_capensis
ENSCSAVG00000002029	-	99	59.464	ENSPCOG00000025375	SF3B2	71	60.597	Propithecus_coquereli
ENSCSAVG00000002029	-	99	59.494	ENSPNYG00000023594	sf3b2	84	60.190	Pundamilia_nyererei
ENSCSAVG00000002029	-	83	66.792	ENSPNAG00000001891	sf3b2	61	66.604	Pygocentrus_nattereri
ENSCSAVG00000002029	-	99	59.306	ENSRNOG00000020412	Sf3b2	71	59.969	Rattus_norvegicus
ENSCSAVG00000002029	-	99	59.621	ENSRBIG00000034065	SF3B2	71	59.812	Rhinopithecus_bieti
ENSCSAVG00000002029	-	99	59.621	ENSRROG00000034496	SF3B2	71	59.812	Rhinopithecus_roxellana
ENSCSAVG00000002029	-	99	59.621	ENSSBOG00000026337	SF3B2	71	60.563	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002029	-	99	56.495	ENSSHAG00000010933	-	58	65.160	Sarcophilus_harrisii
ENSCSAVG00000002029	-	85	58.727	ENSSHAG00000018043	-	65	58.909	Sarcophilus_harrisii
ENSCSAVG00000002029	-	84	67.932	ENSSFOG00015021125	sf3b2	70	61.378	Scleropages_formosus
ENSCSAVG00000002029	-	83	66.922	ENSSMAG00000004079	sf3b2	63	67.232	Scophthalmus_maximus
ENSCSAVG00000002029	-	83	67.113	ENSSDUG00000008499	sf3b2	70	59.742	Seriola_dumerili
ENSCSAVG00000002029	-	83	67.113	ENSSLDG00000006838	sf3b2	63	66.239	Seriola_lalandi_dorsalis
ENSCSAVG00000002029	-	86	66.484	ENSSPUG00000009198	SF3B2	61	68.421	Sphenodon_punctatus
ENSCSAVG00000002029	-	84	67.045	ENSSPAG00000004406	sf3b2	73	59.322	Stegastes_partitus
ENSCSAVG00000002029	-	99	59.779	ENSSSCG00000012957	SF3B2	70	59.875	Sus_scrofa
ENSCSAVG00000002029	-	99	54.140	ENSTRUG00000007611	sf3b2	78	59.515	Takifugu_rubripes
ENSCSAVG00000002029	-	84	64.583	ENSTNIG00000007441	sf3b2	65	64.353	Tetraodon_nigroviridis
ENSCSAVG00000002029	-	89	61.972	ENSTBEG00000004258	SF3B2	63	64.085	Tupaia_belangeri
ENSCSAVG00000002029	-	99	59.652	ENSTTRG00000014339	SF3B2	70	60.407	Tursiops_truncatus
ENSCSAVG00000002029	-	95	59.187	ENSUAMG00000020754	SF3B2	67	59.498	Ursus_americanus
ENSCSAVG00000002029	-	99	58.621	ENSUMAG00000010994	SF3B2	70	59.875	Ursus_maritimus
ENSCSAVG00000002029	-	99	59.621	ENSVVUG00000027029	SF3B2	59	67.225	Vulpes_vulpes
ENSCSAVG00000002029	-	99	60.095	ENSXETG00000008422	sf3b2	80	60.447	Xenopus_tropicalis
ENSCSAVG00000002029	-	84	67.108	ENSXCOG00000008943	sf3b2	75	67.730	Xiphophorus_couchianus
ENSCSAVG00000002029	-	84	67.108	ENSXMAG00000008467	sf3b2	62	67.730	Xiphophorus_maculatus