EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002050 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 14841 bases
Position: chrreftig_51:194724-209564
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003444	IPPT	PF01715.17	7.4e-68	1	1
ENSCSAVP00000003442	DNA_pol_A_exo1	PF01612.20	1.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003496	-	1279	-	ENSCSAVP00000003443	340 (aa)	-	H2YDP5
ENSCSAVT00000003497	-	1511	-	ENSCSAVP00000003444	453 (aa)	-	H2YDP6
ENSCSAVT00000003495	-	814	-	ENSCSAVP00000003442	271 (aa)	-	H2YDP4

Gene Model

Click here to download ENSCSAVG00000002050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002050	-	96	41.913	ENSG00000043514	TRIT1	99	46.429	Homo_sapiens
ENSCSAVG00000002050	-	91	44.258	ENSAPOG00000020918	trit1	88	44.258	Acanthochromis_polyacanthus
ENSCSAVG00000002050	-	93	41.412	ENSAMEG00000004342	TRIT1	89	41.412	Ailuropoda_melanoleuca
ENSCSAVG00000002050	-	87	45.202	ENSACIG00000017409	trit1	86	45.060	Amphilophus_citrinellus
ENSCSAVG00000002050	-	91	44.604	ENSAOCG00000009850	trit1	84	44.604	Amphiprion_ocellaris
ENSCSAVG00000002050	-	91	44.604	ENSAPEG00000001481	trit1	84	44.604	Amphiprion_percula
ENSCSAVG00000002050	-	91	45.000	ENSATEG00000005426	trit1	86	45.000	Anabas_testudineus
ENSCSAVG00000002050	-	73	35.693	ENSAPLG00000011421	TRIT1	94	35.693	Anas_platyrhynchos
ENSCSAVG00000002050	-	92	42.959	ENSACAG00000002280	TRIT1	83	42.959	Anolis_carolinensis
ENSCSAVG00000002050	-	75	67.647	ENSANAG00000030732	TRIT1	85	67.647	Aotus_nancymaae
ENSCSAVG00000002050	-	91	44.762	ENSACLG00000004920	trit1	85	44.762	Astatotilapia_calliptera
ENSCSAVG00000002050	-	92	45.346	ENSAMXG00000010959	trit1	90	45.346	Astyanax_mexicanus
ENSCSAVG00000002050	-	96	42.141	ENSBTAG00000013832	TRIT1	89	42.824	Bos_taurus
ENSCSAVG00000002050	-	91	32.414	WBGene00001740	gro-1	97	33.409	Caenorhabditis_elegans
ENSCSAVG00000002050	-	75	67.647	ENSCJAG00000002620	TRIT1	85	67.647	Callithrix_jacchus
ENSCSAVG00000002050	-	93	41.412	ENSCAFG00000003048	TRIT1	89	41.412	Canis_familiaris
ENSCSAVG00000002050	-	93	39.954	ENSCAFG00020003875	TRIT1	93	44.675	Canis_lupus_dingo
ENSCSAVG00000002050	-	96	41.855	ENSCHIG00000013259	TRIT1	89	42.523	Capra_hircus
ENSCSAVG00000002050	-	94	41.628	ENSTSYG00000004363	TRIT1	90	41.628	Carlito_syrichta
ENSCSAVG00000002050	-	78	38.592	ENSCAPG00000017001	TRIT1	88	38.592	Cavia_aperea
ENSCSAVG00000002050	-	98	42.539	ENSCPOG00000012820	TRIT1	93	42.539	Cavia_porcellus
ENSCSAVG00000002050	-	75	67.647	ENSCCAG00000031271	TRIT1	85	67.647	Cebus_capucinus
ENSCSAVG00000002050	-	93	40.141	ENSCATG00000034344	TRIT1	90	46.082	Cercocebus_atys
ENSCSAVG00000002050	-	94	43.458	ENSCLAG00000009828	TRIT1	89	43.458	Chinchilla_lanigera
ENSCSAVG00000002050	-	86	38.931	ENSCSAG00000001137	TRIT1	93	38.931	Chlorocebus_sabaeus
ENSCSAVG00000002050	-	93	42.118	ENSCHOG00000000435	TRIT1	89	42.118	Choloepus_hoffmanni
ENSCSAVG00000002050	-	75	67.647	ENSCANG00000043008	TRIT1	86	67.647	Colobus_angolensis_palliatus
ENSCSAVG00000002050	-	95	42.725	ENSCGRG00001001894	Trit1	90	42.725	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002050	-	88	41.191	ENSCGRG00000007059	Trit1	88	40.148	Cricetulus_griseus_crigri
ENSCSAVG00000002050	-	87	45.499	ENSCSEG00000009574	trit1	87	45.070	Cynoglossus_semilaevis
ENSCSAVG00000002050	-	91	46.043	ENSDARG00000032876	trit1	95	50.000	Danio_rerio
ENSCSAVG00000002050	-	93	36.646	ENSDNOG00000001994	TRIT1	90	36.646	Dasypus_novemcinctus
ENSCSAVG00000002050	-	96	37.757	ENSDORG00000012449	Trit1	94	37.757	Dipodomys_ordii
ENSCSAVG00000002050	-	93	35.398	FBgn0043799	CG31381	92	35.398	Drosophila_melanogaster
ENSCSAVG00000002050	-	88	42.298	ENSETEG00000008733	TRIT1	94	42.298	Echinops_telfairi
ENSCSAVG00000002050	-	93	42.290	ENSEBUG00000012845	trit1	93	42.290	Eptatretus_burgeri
ENSCSAVG00000002050	-	93	41.339	ENSECAG00000010597	TRIT1	67	67.647	Equus_caballus
ENSCSAVG00000002050	-	72	41.716	ENSEEUG00000009269	TRIT1	70	41.716	Erinaceus_europaeus
ENSCSAVG00000002050	-	90	40.143	ENSELUG00000017278	trit1	84	40.143	Esox_lucius
ENSCSAVG00000002050	-	74	67.647	ENSFCAG00000006029	TRIT1	85	67.647	Felis_catus
ENSCSAVG00000002050	-	83	42.257	ENSFALG00000000532	TRIT1	93	42.257	Ficedula_albicollis
ENSCSAVG00000002050	-	90	41.232	ENSFDAG00000003098	TRIT1	91	41.232	Fukomys_damarensis
ENSCSAVG00000002050	-	69	42.949	ENSFHEG00000022274	trit1	94	42.949	Fundulus_heteroclitus
ENSCSAVG00000002050	-	91	44.181	ENSGMOG00000006522	trit1	96	44.181	Gadus_morhua
ENSCSAVG00000002050	-	92	42.959	ENSGALG00000003851	TRIT1	90	42.959	Gallus_gallus
ENSCSAVG00000002050	-	69	47.923	ENSGAFG00000018636	trit1	96	46.286	Gambusia_affinis
ENSCSAVG00000002050	-	91	43.499	ENSGACG00000008493	trit1	95	43.499	Gasterosteus_aculeatus
ENSCSAVG00000002050	-	85	42.051	ENSGAGG00000000522	TRIT1	94	42.051	Gopherus_agassizii
ENSCSAVG00000002050	-	96	41.458	ENSGGOG00000010070	TRIT1	90	46.395	Gorilla_gorilla
ENSCSAVG00000002050	-	91	44.762	ENSHBUG00000018999	trit1	85	44.762	Haplochromis_burtoni
ENSCSAVG00000002050	-	93	37.882	ENSHGLG00000009564	-	90	37.882	Heterocephalus_glaber_female
ENSCSAVG00000002050	-	95	41.839	ENSHGLG00000010308	-	92	41.379	Heterocephalus_glaber_female
ENSCSAVG00000002050	-	85	30.334	ENSHGLG00100018159	-	97	30.334	Heterocephalus_glaber_male
ENSCSAVG00000002050	-	95	41.839	ENSHGLG00100015382	-	92	41.379	Heterocephalus_glaber_male
ENSCSAVG00000002050	-	88	43.689	ENSHCOG00000006755	trit1	79	43.689	Hippocampus_comes
ENSCSAVG00000002050	-	91	45.433	ENSIPUG00000021822	trit1	84	45.433	Ictalurus_punctatus
ENSCSAVG00000002050	-	94	40.930	ENSSTOG00000006446	TRIT1	87	40.930	Ictidomys_tridecemlineatus
ENSCSAVG00000002050	-	93	38.118	ENSJJAG00000000316	-	92	38.118	Jaculus_jaculus
ENSCSAVG00000002050	-	93	38.407	ENSJJAG00000000300	-	89	38.407	Jaculus_jaculus
ENSCSAVG00000002050	-	91	45.192	ENSKMAG00000021788	trit1	85	45.192	Kryptolebias_marmoratus
ENSCSAVG00000002050	-	96	43.596	ENSLBEG00000024262	trit1	89	43.596	Labrus_bergylta
ENSCSAVG00000002050	-	96	43.750	ENSLACG00000013861	TRIT1	90	43.750	Latimeria_chalumnae
ENSCSAVG00000002050	-	95	44.866	ENSLOCG00000002057	trit1	92	44.866	Lepisosteus_oculatus
ENSCSAVG00000002050	-	92	40.995	ENSLAFG00000016876	TRIT1	88	40.995	Loxodonta_africana
ENSCSAVG00000002050	-	93	40.941	ENSMFAG00000001316	TRIT1	90	46.082	Macaca_fascicularis
ENSCSAVG00000002050	-	93	40.941	ENSMMUG00000016220	TRIT1	90	46.082	Macaca_mulatta
ENSCSAVG00000002050	-	93	40.941	ENSMNEG00000023137	TRIT1	90	46.082	Macaca_nemestrina
ENSCSAVG00000002050	-	93	40.941	ENSMLEG00000035296	TRIT1	90	46.082	Mandrillus_leucophaeus
ENSCSAVG00000002050	-	89	43.447	ENSMAMG00000005868	trit1	83	49.211	Mastacembelus_armatus
ENSCSAVG00000002050	-	91	44.762	ENSMZEG00005011506	trit1	85	44.762	Maylandia_zebra
ENSCSAVG00000002050	-	83	40.682	ENSMGAG00000005516	TRIT1	99	40.682	Meleagris_gallopavo
ENSCSAVG00000002050	-	92	42.891	ENSMAUG00000000399	Trit1	88	42.891	Mesocricetus_auratus
ENSCSAVG00000002050	-	75	67.647	ENSMICG00000016294	TRIT1	86	67.647	Microcebus_murinus
ENSCSAVG00000002050	-	93	42.353	ENSMOCG00000008173	Trit1	89	42.353	Microtus_ochrogaster
ENSCSAVG00000002050	-	86	41.266	ENSMMOG00000021140	trit1	89	41.266	Mola_mola
ENSCSAVG00000002050	-	94	42.202	ENSMODG00000017650	TRIT1	93	41.950	Monodelphis_domestica
ENSCSAVG00000002050	-	91	43.405	ENSMALG00000017843	trit1	86	43.405	Monopterus_albus
ENSCSAVG00000002050	-	91	42.857	MGP_CAROLIEiJ_G0026428	Trit1	87	42.857	Mus_caroli
ENSCSAVG00000002050	-	91	42.131	ENSMUSG00000028653	Trit1	87	42.131	Mus_musculus
ENSCSAVG00000002050	-	92	43.365	MGP_PahariEiJ_G0028758	Trit1	88	43.365	Mus_pahari
ENSCSAVG00000002050	-	91	42.857	MGP_SPRETEiJ_G0027408	Trit1	87	42.857	Mus_spretus
ENSCSAVG00000002050	-	93	42.254	ENSMPUG00000014291	TRIT1	89	42.254	Mustela_putorius_furo
ENSCSAVG00000002050	-	92	41.627	ENSMLUG00000000334	TRIT1	87	41.627	Myotis_lucifugus
ENSCSAVG00000002050	-	93	42.588	ENSNLEG00000012038	TRIT1	90	46.395	Nomascus_leucogenys
ENSCSAVG00000002050	-	92	38.810	ENSMEUG00000005217	TRIT1	88	38.810	Notamacropus_eugenii
ENSCSAVG00000002050	-	63	42.945	ENSOPRG00000003205	-	60	42.945	Ochotona_princeps
ENSCSAVG00000002050	-	95	41.876	ENSODEG00000006117	TRIT1	90	41.876	Octodon_degus
ENSCSAVG00000002050	-	91	43.662	ENSONIG00000015407	trit1	87	43.662	Oreochromis_niloticus
ENSCSAVG00000002050	-	83	40.000	ENSOANG00000002779	TRIT1	96	39.535	Ornithorhynchus_anatinus
ENSCSAVG00000002050	-	91	43.478	ENSOCUG00000002054	TRIT1	87	43.478	Oryctolagus_cuniculus
ENSCSAVG00000002050	-	91	45.564	ENSORLG00000005802	trit1	89	45.564	Oryzias_latipes
ENSCSAVG00000002050	-	91	45.084	ENSORLG00020005519	trit1	89	45.084	Oryzias_latipes_hni
ENSCSAVG00000002050	-	92	44.208	ENSORLG00015018715	trit1	90	44.208	Oryzias_latipes_hsok
ENSCSAVG00000002050	-	93	45.154	ENSOMEG00000006569	trit1	89	45.390	Oryzias_melastigma
ENSCSAVG00000002050	-	91	42.995	ENSOGAG00000009571	TRIT1	87	42.995	Otolemur_garnettii
ENSCSAVG00000002050	-	96	42.727	ENSOARG00000020140	TRIT1	89	43.427	Ovis_aries
ENSCSAVG00000002050	-	96	41.913	ENSPPAG00000023930	TRIT1	90	46.395	Pan_paniscus
ENSCSAVG00000002050	-	93	41.647	ENSPPRG00000009680	TRIT1	87	50.943	Panthera_pardus
ENSCSAVG00000002050	-	93	41.647	ENSPTIG00000021134	TRIT1	87	50.943	Panthera_tigris_altaica
ENSCSAVG00000002050	-	96	41.913	ENSPTRG00000000579	TRIT1	90	46.395	Pan_troglodytes
ENSCSAVG00000002050	-	93	40.941	ENSPANG00000018125	TRIT1	90	46.082	Papio_anubis
ENSCSAVG00000002050	-	84	44.156	ENSPKIG00000024527	trit1	96	44.156	Paramormyrops_kingsleyae
ENSCSAVG00000002050	-	80	31.793	ENSPSIG00000017073	TRIT1	99	31.793	Pelodiscus_sinensis
ENSCSAVG00000002050	-	81	42.547	ENSPMGG00000018445	trit1	91	42.257	Periophthalmus_magnuspinnatus
ENSCSAVG00000002050	-	93	42.353	ENSPEMG00000022418	Trit1	89	42.353	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002050	-	85	42.424	ENSPMAG00000008892	trit1	97	42.424	Petromyzon_marinus
ENSCSAVG00000002050	-	92	43.091	ENSPCIG00000020666	TRIT1	91	48.276	Phascolarctos_cinereus
ENSCSAVG00000002050	-	92	42.925	ENSPFOG00000014626	trit1	87	42.925	Poecilia_formosa
ENSCSAVG00000002050	-	69	48.243	ENSPLAG00000011669	trit1	91	48.243	Poecilia_latipinna
ENSCSAVG00000002050	-	54	48.361	ENSPMEG00000023788	trit1	88	48.361	Poecilia_mexicana
ENSCSAVG00000002050	-	69	47.771	ENSPREG00000018182	trit1	88	47.771	Poecilia_reticulata
ENSCSAVG00000002050	-	93	42.824	ENSPPYG00000001499	TRIT1	89	41.882	Pongo_abelii
ENSCSAVG00000002050	-	75	34.311	ENSPCAG00000014680	TRIT1	92	34.311	Procavia_capensis
ENSCSAVG00000002050	-	93	40.471	ENSPCOG00000014150	TRIT1	89	40.471	Propithecus_coquereli
ENSCSAVG00000002050	-	93	37.176	ENSPVAG00000003344	TRIT1	89	37.176	Pteropus_vampyrus
ENSCSAVG00000002050	-	62	50.871	ENSPNYG00000001003	trit1	94	50.172	Pundamilia_nyererei
ENSCSAVG00000002050	-	91	46.135	ENSPNAG00000009466	trit1	87	49.855	Pygocentrus_nattereri
ENSCSAVG00000002050	-	92	41.972	ENSRNOG00000014274	Trit1	89	41.972	Rattus_norvegicus
ENSCSAVG00000002050	-	93	41.882	ENSRBIG00000043179	TRIT1	90	46.082	Rhinopithecus_bieti
ENSCSAVG00000002050	-	93	41.882	ENSRROG00000042670	TRIT1	90	46.082	Rhinopithecus_roxellana
ENSCSAVG00000002050	-	95	33.040	YOR274W	-	99	33.040	Saccharomyces_cerevisiae
ENSCSAVG00000002050	-	75	67.647	ENSSBOG00000024417	TRIT1	85	67.647	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002050	-	85	39.695	ENSSHAG00000018363	TRIT1	91	39.695	Sarcophilus_harrisii
ENSCSAVG00000002050	-	91	44.578	ENSSFOG00015007284	trit1	80	44.578	Scleropages_formosus
ENSCSAVG00000002050	-	91	43.645	ENSSMAG00000020730	trit1	86	43.405	Scophthalmus_maximus
ENSCSAVG00000002050	-	91	45.455	ENSSDUG00000001683	trit1	85	45.455	Seriola_dumerili
ENSCSAVG00000002050	-	87	45.409	ENSSLDG00000008379	trit1	85	45.215	Seriola_lalandi_dorsalis
ENSCSAVG00000002050	-	92	43.124	ENSSARG00000004540	TRIT1	89	43.124	Sorex_araneus
ENSCSAVG00000002050	-	85	41.432	ENSSPUG00000003472	TRIT1	78	41.432	Sphenodon_punctatus
ENSCSAVG00000002050	-	87	43.890	ENSSPAG00000020745	trit1	87	43.890	Stegastes_partitus
ENSCSAVG00000002050	-	83	41.579	ENSTGUG00000001242	TRIT1	99	41.579	Taeniopygia_guttata
ENSCSAVG00000002050	-	91	45.933	ENSTRUG00000013936	trit1	90	44.819	Takifugu_rubripes
ENSCSAVG00000002050	-	89	44.853	ENSTNIG00000009240	trit1	88	44.853	Tetraodon_nigroviridis
ENSCSAVG00000002050	-	76	58.537	ENSTBEG00000001317	TRIT1	71	58.537	Tupaia_belangeri
ENSCSAVG00000002050	-	93	43.529	ENSTTRG00000005064	TRIT1	89	43.529	Tursiops_truncatus
ENSCSAVG00000002050	-	54	49.187	ENSUAMG00000000522	-	90	53.750	Ursus_americanus
ENSCSAVG00000002050	-	93	42.353	ENSUMAG00000017299	TRIT1	80	42.353	Ursus_maritimus
ENSCSAVG00000002050	-	93	37.882	ENSVPAG00000003008	TRIT1	89	37.882	Vicugna_pacos
ENSCSAVG00000002050	-	91	43.602	ENSXETG00000010952	trit1	90	43.602	Xenopus_tropicalis
ENSCSAVG00000002050	-	69	48.243	ENSXMAG00000016302	trit1	86	48.243	Xiphophorus_maculatus