EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002061 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 14485 bases
Position: chrreftig_167:63724-78208
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003467	G-patch	PF01585.23	2.2e-15	1	1
ENSCSAVP00000003469	G-patch	PF01585.23	2.3e-15	1	1
ENSCSAVP00000003470	G-patch	PF01585.23	2.3e-15	1	1
ENSCSAVP00000003468	G-patch	PF01585.23	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003522	-	2433	-	ENSCSAVP00000003469	810 (aa)	-	H2YDS1
ENSCSAVT00000003523	-	2424	-	ENSCSAVP00000003470	807 (aa)	-	H2YDS2
ENSCSAVT00000003520	-	2382	-	ENSCSAVP00000003467	793 (aa)	-	H2YDR9
ENSCSAVT00000003521	-	2346	-	ENSCSAVP00000003468	781 (aa)	-	H2YDS0

Gene Model

Click here to download ENSCSAVG00000002061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002061's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002061	-	98	41.484	ENSG00000100109	TFIP11	98	41.969	Homo_sapiens
ENSCSAVG00000002061	-	99	39.571	ENSAPOG00000011350	tfip11	99	40.095	Acanthochromis_polyacanthus
ENSCSAVG00000002061	-	99	41.056	ENSAMEG00000018077	TFIP11	98	40.936	Ailuropoda_melanoleuca
ENSCSAVG00000002061	-	99	39.265	ENSACIG00000020016	tfip11	99	39.387	Amphilophus_citrinellus
ENSCSAVG00000002061	-	99	40.167	ENSAOCG00000014412	tfip11	99	40.145	Amphiprion_ocellaris
ENSCSAVG00000002061	-	99	40.096	ENSAPEG00000021837	tfip11	99	40.145	Amphiprion_percula
ENSCSAVG00000002061	-	98	39.976	ENSATEG00000006472	tfip11	99	39.809	Anabas_testudineus
ENSCSAVG00000002061	-	87	41.541	ENSAPLG00000012229	TFIP11	93	42.225	Anas_platyrhynchos
ENSCSAVG00000002061	-	98	40.948	ENSANAG00000036330	TFIP11	98	40.843	Aotus_nancymaae
ENSCSAVG00000002061	-	99	39.694	ENSACLG00000001959	tfip11	99	39.906	Astatotilapia_calliptera
ENSCSAVG00000002061	-	98	39.616	ENSAMXG00000018840	tfip11	98	39.298	Astyanax_mexicanus
ENSCSAVG00000002061	-	99	40.528	ENSBTAG00000012288	TFIP11	98	40.288	Bos_taurus
ENSCSAVG00000002061	-	98	40.948	ENSCJAG00000008628	TFIP11	98	40.843	Callithrix_jacchus
ENSCSAVG00000002061	-	99	41.176	ENSCAFG00000011741	TFIP11	98	41.056	Canis_familiaris
ENSCSAVG00000002061	-	99	41.176	ENSCAFG00020022398	TFIP11	98	41.056	Canis_lupus_dingo
ENSCSAVG00000002061	-	99	40.647	ENSCHIG00000017173	TFIP11	98	40.670	Capra_hircus
ENSCSAVG00000002061	-	99	41.155	ENSTSYG00000011768	TFIP11	98	40.915	Carlito_syrichta
ENSCSAVG00000002061	-	99	39.329	ENSCAPG00000014283	TFIP11	98	39.089	Cavia_aperea
ENSCSAVG00000002061	-	99	41.127	ENSCPOG00000000358	TFIP11	98	40.887	Cavia_porcellus
ENSCSAVG00000002061	-	98	40.948	ENSCCAG00000022675	TFIP11	98	40.843	Cebus_capucinus
ENSCSAVG00000002061	-	98	41.363	ENSCATG00000040954	TFIP11	98	41.176	Cercocebus_atys
ENSCSAVG00000002061	-	98	41.069	ENSCLAG00000007269	TFIP11	98	41.106	Chinchilla_lanigera
ENSCSAVG00000002061	-	98	41.363	ENSCSAG00000010084	TFIP11	98	41.176	Chlorocebus_sabaeus
ENSCSAVG00000002061	-	88	39.518	ENSCHOG00000008730	TFIP11	88	39.147	Choloepus_hoffmanni
ENSCSAVG00000002061	-	99	41.458	ENSCPBG00000021598	TFIP11	99	41.247	Chrysemys_picta_bellii
ENSCSAVG00000002061	-	99	75.750	ENSCING00000008698	stip	99	75.390	Ciona_intestinalis
ENSCSAVG00000002061	-	98	41.363	ENSCANG00000002400	TFIP11	98	41.176	Colobus_angolensis_palliatus
ENSCSAVG00000002061	-	99	41.388	ENSCGRG00001013439	Tfip11	98	41.078	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002061	-	99	41.388	ENSCGRG00000000420	Tfip11	98	41.078	Cricetulus_griseus_crigri
ENSCSAVG00000002061	-	98	39.490	ENSCSEG00000014082	tfip11	99	39.433	Cynoglossus_semilaevis
ENSCSAVG00000002061	-	99	38.308	ENSCVAG00000011674	tfip11	99	39.427	Cyprinodon_variegatus
ENSCSAVG00000002061	-	98	40.954	ENSDARG00000056932	tfip11	99	40.670	Danio_rerio
ENSCSAVG00000002061	-	99	40.816	ENSDNOG00000042556	TFIP11	98	40.789	Dasypus_novemcinctus
ENSCSAVG00000002061	-	99	41.487	ENSDORG00000006263	Tfip11	98	41.247	Dipodomys_ordii
ENSCSAVG00000002061	-	99	32.360	FBgn0024191	sip1	99	33.139	Drosophila_melanogaster
ENSCSAVG00000002061	-	99	36.644	ENSEBUG00000015059	tfip11	99	36.530	Eptatretus_burgeri
ENSCSAVG00000002061	-	99	38.193	ENSEASG00005014285	-	98	38.175	Equus_asinus_asinus
ENSCSAVG00000002061	-	98	40.948	ENSEASG00005009760	-	98	40.767	Equus_asinus_asinus
ENSCSAVG00000002061	-	98	41.069	ENSECAG00000016242	-	98	40.887	Equus_caballus
ENSCSAVG00000002061	-	99	38.554	ENSECAG00000004795	-	98	38.462	Equus_caballus
ENSCSAVG00000002061	-	92	39.610	ENSEEUG00000015847	TFIP11	99	39.374	Erinaceus_europaeus
ENSCSAVG00000002061	-	99	40.263	ENSELUG00000011596	TFIP11	99	39.904	Esox_lucius
ENSCSAVG00000002061	-	99	40.263	ENSELUG00000022017	tfip11	99	39.904	Esox_lucius
ENSCSAVG00000002061	-	99	41.056	ENSFCAG00000031626	TFIP11	98	40.936	Felis_catus
ENSCSAVG00000002061	-	99	39.529	ENSFALG00000008853	-	99	39.578	Ficedula_albicollis
ENSCSAVG00000002061	-	99	41.219	ENSFALG00000008481	-	99	41.078	Ficedula_albicollis
ENSCSAVG00000002061	-	99	41.317	ENSFDAG00000016663	TFIP11	98	41.148	Fukomys_damarensis
ENSCSAVG00000002061	-	99	38.676	ENSFHEG00000011548	tfip11	99	40.714	Fundulus_heteroclitus
ENSCSAVG00000002061	-	99	39.412	ENSGMOG00000004834	tfip11	99	39.739	Gadus_morhua
ENSCSAVG00000002061	-	99	41.289	ENSGALG00000005623	TFIP11	99	41.127	Gallus_gallus
ENSCSAVG00000002061	-	99	38.480	ENSGAFG00000012142	tfip11	99	39.007	Gambusia_affinis
ENSCSAVG00000002061	-	98	39.016	ENSGACG00000009599	tfip11	99	39.336	Gasterosteus_aculeatus
ENSCSAVG00000002061	-	99	41.577	ENSGAGG00000008196	TFIP11	99	41.367	Gopherus_agassizii
ENSCSAVG00000002061	-	98	41.484	ENSGGOG00000004999	TFIP11	98	41.297	Gorilla_gorilla
ENSCSAVG00000002061	-	99	39.812	ENSHBUG00000009935	tfip11	99	40.024	Haplochromis_burtoni
ENSCSAVG00000002061	-	99	41.127	ENSHGLG00000008873	TFIP11	98	40.887	Heterocephalus_glaber_female
ENSCSAVG00000002061	-	99	41.127	ENSHGLG00100016817	TFIP11	98	40.887	Heterocephalus_glaber_male
ENSCSAVG00000002061	-	99	39.197	ENSHCOG00000015846	tfip11	99	38.941	Hippocampus_comes
ENSCSAVG00000002061	-	99	39.315	ENSIPUG00000011965	tfip11	99	39.760	Ictalurus_punctatus
ENSCSAVG00000002061	-	99	38.471	ENSSTOG00000013530	TFIP11	83	65.217	Ictidomys_tridecemlineatus
ENSCSAVG00000002061	-	98	40.672	ENSKMAG00000013948	tfip11	99	40.511	Kryptolebias_marmoratus
ENSCSAVG00000002061	-	98	39.708	ENSLBEG00000014079	tfip11	99	39.474	Labrus_bergylta
ENSCSAVG00000002061	-	99	40.024	ENSLACG00000009243	TFIP11	99	40.284	Latimeria_chalumnae
ENSCSAVG00000002061	-	99	37.204	ENSLOCG00000008684	tfip11	99	38.415	Lepisosteus_oculatus
ENSCSAVG00000002061	-	98	41.363	ENSMFAG00000043406	TFIP11	98	41.176	Macaca_fascicularis
ENSCSAVG00000002061	-	98	41.363	ENSMMUG00000023446	TFIP11	98	41.176	Macaca_mulatta
ENSCSAVG00000002061	-	94	39.330	ENSMNEG00000039522	TFIP11	99	42.000	Macaca_nemestrina
ENSCSAVG00000002061	-	98	41.363	ENSMLEG00000039426	TFIP11	98	41.176	Mandrillus_leucophaeus
ENSCSAVG00000002061	-	98	39.364	ENSMAMG00000013817	tfip11	99	43.580	Mastacembelus_armatus
ENSCSAVG00000002061	-	99	39.694	ENSMZEG00005016814	tfip11	99	39.906	Maylandia_zebra
ENSCSAVG00000002061	-	99	40.263	ENSMGAG00000006881	TFIP11	99	39.904	Meleagris_gallopavo
ENSCSAVG00000002061	-	99	41.507	ENSMAUG00000016136	Tfip11	98	41.247	Mesocricetus_auratus
ENSCSAVG00000002061	-	99	40.647	ENSMICG00000013732	TFIP11	98	40.479	Microcebus_murinus
ENSCSAVG00000002061	-	99	41.507	ENSMOCG00000021195	Tfip11	98	41.127	Microtus_ochrogaster
ENSCSAVG00000002061	-	99	39.021	ENSMMOG00000017940	tfip11	99	38.817	Mola_mola
ENSCSAVG00000002061	-	98	41.054	ENSMODG00000010710	TFIP11	98	40.843	Monodelphis_domestica
ENSCSAVG00000002061	-	98	40.640	ENSMODG00000025040	-	98	40.557	Monodelphis_domestica
ENSCSAVG00000002061	-	98	40.488	ENSMALG00000011938	tfip11	99	40.238	Monopterus_albus
ENSCSAVG00000002061	-	99	40.093	MGP_CAROLIEiJ_G0027562	Tfip11	92	66.279	Mus_caroli
ENSCSAVG00000002061	-	98	41.425	ENSMUSG00000029345	Tfip11	92	66.279	Mus_musculus
ENSCSAVG00000002061	-	98	41.233	MGP_PahariEiJ_G0024144	-	92	66.279	Mus_pahari
ENSCSAVG00000002061	-	98	41.425	MGP_SPRETEiJ_G0028560	Tfip11	92	66.279	Mus_spretus
ENSCSAVG00000002061	-	97	41.299	ENSMPUG00000013605	TFIP11	91	41.176	Mustela_putorius_furo
ENSCSAVG00000002061	-	99	40.479	ENSMLUG00000008015	TFIP11	98	40.670	Myotis_lucifugus
ENSCSAVG00000002061	-	99	41.737	ENSNGAG00000001168	Tfip11	98	41.496	Nannospalax_galili
ENSCSAVG00000002061	-	99	40.048	ENSNBRG00000005227	tfip11	99	39.928	Neolamprologus_brichardi
ENSCSAVG00000002061	-	99	39.742	ENSNLEG00000007735	TFIP11	98	40.528	Nomascus_leucogenys
ENSCSAVG00000002061	-	98	40.663	ENSMEUG00000006642	TFIP11	98	40.580	Notamacropus_eugenii
ENSCSAVG00000002061	-	65	47.849	ENSOPRG00000013740	TFIP11	63	49.123	Ochotona_princeps
ENSCSAVG00000002061	-	98	41.069	ENSODEG00000017086	TFIP11	98	41.155	Octodon_degus
ENSCSAVG00000002061	-	99	39.787	ENSONIG00000013652	tfip11	99	39.090	Oreochromis_niloticus
ENSCSAVG00000002061	-	98	41.434	ENSOCUG00000006298	TFIP11	98	41.198	Oryctolagus_cuniculus
ENSCSAVG00000002061	-	98	39.360	ENSORLG00000008318	tfip11	99	38.949	Oryzias_latipes
ENSCSAVG00000002061	-	98	39.483	ENSORLG00020012182	tfip11	99	39.125	Oryzias_latipes_hni
ENSCSAVG00000002061	-	98	39.247	ENSORLG00015001303	tfip11	99	39.007	Oryzias_latipes_hsok
ENSCSAVG00000002061	-	98	39.173	ENSOMEG00000000088	tfip11	99	38.690	Oryzias_melastigma
ENSCSAVG00000002061	-	99	37.425	ENSOGAG00000029400	-	99	37.274	Otolemur_garnettii
ENSCSAVG00000002061	-	98	40.705	ENSOGAG00000010584	-	98	40.528	Otolemur_garnettii
ENSCSAVG00000002061	-	99	41.219	ENSOARG00000001236	TFIP11	98	41.437	Ovis_aries
ENSCSAVG00000002061	-	98	41.484	ENSPPAG00000037529	TFIP11	98	41.297	Pan_paniscus
ENSCSAVG00000002061	-	99	41.056	ENSPPRG00000010373	TFIP11	98	40.958	Panthera_pardus
ENSCSAVG00000002061	-	99	41.056	ENSPTIG00000005731	TFIP11	98	40.958	Panthera_tigris_altaica
ENSCSAVG00000002061	-	98	41.484	ENSPTRG00000014196	TFIP11	98	41.297	Pan_troglodytes
ENSCSAVG00000002061	-	98	41.363	ENSPANG00000018711	TFIP11	98	41.176	Papio_anubis
ENSCSAVG00000002061	-	99	39.571	ENSPKIG00000024728	tfip11	99	39.405	Paramormyrops_kingsleyae
ENSCSAVG00000002061	-	99	41.935	ENSPSIG00000009979	TFIP11	99	41.847	Pelodiscus_sinensis
ENSCSAVG00000002061	-	99	38.678	ENSPMGG00000021616	tfip11	99	38.631	Periophthalmus_magnuspinnatus
ENSCSAVG00000002061	-	99	41.268	ENSPEMG00000009979	Tfip11	98	41.127	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002061	-	99	38.462	ENSPMAG00000005546	tfip11	99	38.826	Petromyzon_marinus
ENSCSAVG00000002061	-	98	40.663	ENSPCIG00000020963	TFIP11	98	40.580	Phascolarctos_cinereus
ENSCSAVG00000002061	-	99	39.019	ENSPFOG00000016485	tfip11	99	39.859	Poecilia_formosa
ENSCSAVG00000002061	-	99	39.019	ENSPLAG00000003258	tfip11	99	39.859	Poecilia_latipinna
ENSCSAVG00000002061	-	99	39.136	ENSPMEG00000008257	tfip11	99	39.906	Poecilia_mexicana
ENSCSAVG00000002061	-	98	40.410	ENSPREG00000001742	tfip11	99	40.453	Poecilia_reticulata
ENSCSAVG00000002061	-	99	38.740	ENSPPYG00000011666	TFIP11	98	39.401	Pongo_abelii
ENSCSAVG00000002061	-	92	43.581	ENSPCAG00000005912	TFIP11	91	43.581	Procavia_capensis
ENSCSAVG00000002061	-	99	40.528	ENSPCOG00000027919	TFIP11	98	40.288	Propithecus_coquereli
ENSCSAVG00000002061	-	99	40.024	ENSPNYG00000018025	tfip11	99	39.906	Pundamilia_nyererei
ENSCSAVG00000002061	-	99	40.785	ENSPNAG00000015368	tfip11	99	40.428	Pygocentrus_nattereri
ENSCSAVG00000002061	-	99	41.007	ENSRNOG00000000663	Tfip11	98	40.767	Rattus_norvegicus
ENSCSAVG00000002061	-	98	41.241	ENSRBIG00000044444	TFIP11	98	41.176	Rhinopithecus_bieti
ENSCSAVG00000002061	-	98	41.241	ENSRROG00000034930	TFIP11	98	41.176	Rhinopithecus_roxellana
ENSCSAVG00000002061	-	98	40.948	ENSSBOG00000035111	TFIP11	98	40.843	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002061	-	98	40.686	ENSSHAG00000014104	TFIP11	98	40.580	Sarcophilus_harrisii
ENSCSAVG00000002061	-	99	38.580	ENSSFOG00015013856	tfip11	98	40.433	Scleropages_formosus
ENSCSAVG00000002061	-	98	41.019	ENSSMAG00000011179	tfip11	99	40.451	Scophthalmus_maximus
ENSCSAVG00000002061	-	98	41.098	ENSSDUG00000014159	tfip11	99	40.405	Seriola_dumerili
ENSCSAVG00000002061	-	63	37.500	ENSSLDG00000001011	tfip11	98	38.007	Seriola_lalandi_dorsalis
ENSCSAVG00000002061	-	75	57.895	ENSSARG00000007065	TFIP11	88	60.000	Sorex_araneus
ENSCSAVG00000002061	-	92	41.055	ENSSPUG00000007618	TFIP11	97	40.862	Sphenodon_punctatus
ENSCSAVG00000002061	-	99	40.970	ENSSPAG00000017719	tfip11	99	40.777	Stegastes_partitus
ENSCSAVG00000002061	-	99	40.986	ENSSSCG00000009962	TFIP11	98	40.887	Sus_scrofa
ENSCSAVG00000002061	-	99	41.148	ENSTGUG00000007710	TFIP11	99	40.696	Taeniopygia_guttata
ENSCSAVG00000002061	-	99	38.012	ENSTRUG00000016348	tfip11	99	37.939	Takifugu_rubripes
ENSCSAVG00000002061	-	99	37.866	ENSTNIG00000015914	tfip11	99	38.797	Tetraodon_nigroviridis
ENSCSAVG00000002061	-	73	45.578	ENSTBEG00000007895	TFIP11	69	46.545	Tupaia_belangeri
ENSCSAVG00000002061	-	66	47.177	ENSTTRG00000009421	TFIP11	63	47.899	Tursiops_truncatus
ENSCSAVG00000002061	-	88	42.013	ENSUAMG00000016248	TFIP11	91	42.976	Ursus_americanus
ENSCSAVG00000002061	-	99	41.262	ENSUMAG00000015595	TFIP11	98	41.141	Ursus_maritimus
ENSCSAVG00000002061	-	88	42.148	ENSVVUG00000015797	TFIP11	92	43.115	Vulpes_vulpes
ENSCSAVG00000002061	-	94	39.670	ENSXETG00000003784	tfip11	99	39.417	Xenopus_tropicalis
ENSCSAVG00000002061	-	99	38.129	ENSXCOG00000016947	tfip11	99	38.935	Xiphophorus_couchianus
ENSCSAVG00000002061	-	98	39.566	ENSXMAG00000007524	tfip11	99	39.362	Xiphophorus_maculatus