EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000002065 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
865 bases
Position
chrreftig_98:223608-224472
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000003476LSMPF01423.222.5e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000003529-276-ENSCSAVP0000000347682 (aa)-H2YDS8
Gene Model
Click here to download ENSCSAVG00000002065's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002065's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000002065-8048.485ENSCSAVG00000007498-7548.485
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000002065-9397.368ENSG00000164167LSM69597.368Homo_sapiens
ENSCSAVG00000002065-9396.053ENSAPOG00000019832lsm69596.053Acanthochromis_polyacanthus
ENSCSAVG00000002065-9397.368ENSAMEG00000016671LSM69597.368Ailuropoda_melanoleuca
ENSCSAVG00000002065-9396.053ENSACIG00000016711lsm69596.053Amphilophus_citrinellus
ENSCSAVG00000002065-9396.053ENSAPEG00000023992lsm69596.053Amphiprion_percula
ENSCSAVG00000002065-9396.053ENSATEG00000012610lsm69596.053Anabas_testudineus
ENSCSAVG00000002065-9397.368ENSAPLG00000012594LSM69797.368Anas_platyrhynchos
ENSCSAVG00000002065-9397.368ENSACAG00000004004LSM69597.368Anolis_carolinensis
ENSCSAVG00000002065-9397.368ENSANAG00000030568-9597.368Aotus_nancymaae
ENSCSAVG00000002065-9382.895ENSANAG00000021839-9582.895Aotus_nancymaae
ENSCSAVG00000002065-9396.053ENSACLG00000025621lsm69596.053Astatotilapia_calliptera
ENSCSAVG00000002065-9396.053ENSAMXG00000038738lsm69596.053Astyanax_mexicanus
ENSCSAVG00000002065-9192.000ENSBTAG00000052085-9492.000Bos_taurus
ENSCSAVG00000002065-9397.368ENSBTAG00000014060LSM69597.368Bos_taurus
ENSCSAVG00000002065-9480.519WBGene00003080lsm-610080.519Caenorhabditis_elegans
ENSCSAVG00000002065-9397.368ENSCJAG00000002482LSM69597.368Callithrix_jacchus
ENSCSAVG00000002065-9397.368ENSCAFG00000007738LSM69597.368Canis_familiaris
ENSCSAVG00000002065-9397.368ENSCAFG00020025902LSM69597.368Canis_lupus_dingo
ENSCSAVG00000002065-8398.529ENSCHIG00000012864-9698.529Capra_hircus
ENSCSAVG00000002065-9381.579ENSCHIG00000024198-8981.579Capra_hircus
ENSCSAVG00000002065-9397.368ENSCHIG00000010334-9597.368Capra_hircus
ENSCSAVG00000002065-9397.368ENSTSYG00000026972LSM69597.368Carlito_syrichta
ENSCSAVG00000002065-9381.579ENSTSYG00000012759-10081.579Carlito_syrichta
ENSCSAVG00000002065-9397.368ENSCAPG00000008104LSM69597.368Cavia_aperea
ENSCSAVG00000002065-7696.774ENSCAPG00000011179-9596.774Cavia_aperea
ENSCSAVG00000002065-9397.368ENSCPOG00000032655LSM69597.368Cavia_porcellus
ENSCSAVG00000002065-9397.368ENSCCAG00000036437LSM69597.368Cebus_capucinus
ENSCSAVG00000002065-9494.805ENSCCAG00000020665-9694.805Cebus_capucinus
ENSCSAVG00000002065-9173.333ENSCATG00000038799-9373.333Cercocebus_atys
ENSCSAVG00000002065-9397.368ENSCATG00000002770-9597.368Cercocebus_atys
ENSCSAVG00000002065-8580.282ENSCLAG00000005685-10080.282Chinchilla_lanigera
ENSCSAVG00000002065-9397.368ENSCLAG00000005495LSM69597.368Chinchilla_lanigera
ENSCSAVG00000002065-9397.368ENSCSAG00000003421LSM69597.368Chlorocebus_sabaeus
ENSCSAVG00000002065-9375.000ENSCHOG00000003420LSM69475.000Choloepus_hoffmanni
ENSCSAVG00000002065-9397.368ENSCPBG00000027472LSM68097.368Chrysemys_picta_bellii
ENSCSAVG00000002065-10097.561ENSCING00000019152-10097.561Ciona_intestinalis
ENSCSAVG00000002065-9368.421ENSCANG00000035214-9468.421Colobus_angolensis_palliatus
ENSCSAVG00000002065-9397.368ENSCANG00000006849-9597.368Colobus_angolensis_palliatus
ENSCSAVG00000002065-9397.368ENSCANG00000041263-9597.368Colobus_angolensis_palliatus
ENSCSAVG00000002065-9397.368ENSCGRG00001017142Lsm69597.368Cricetulus_griseus_chok1gshd
ENSCSAVG00000002065-9397.368ENSCGRG00000008320Lsm69597.368Cricetulus_griseus_crigri
ENSCSAVG00000002065-9396.053ENSCSEG00000000423lsm69596.053Cynoglossus_semilaevis
ENSCSAVG00000002065-9396.053ENSCVAG00000001592lsm69596.053Cyprinodon_variegatus
ENSCSAVG00000002065-9396.053ENSDARG00000036995lsm69596.053Danio_rerio
ENSCSAVG00000002065-9396.053ENSDNOG00000044848-9596.053Dasypus_novemcinctus
ENSCSAVG00000002065-80100.000ENSDNOG00000040186-71100.000Dasypus_novemcinctus
ENSCSAVG00000002065-9397.368ENSDORG00000000933Lsm69597.368Dipodomys_ordii
ENSCSAVG00000002065-9584.615FBgn0034564CG93449984.615Drosophila_melanogaster
ENSCSAVG00000002065-5795.745ENSETEG00000013098LSM69895.745Echinops_telfairi
ENSCSAVG00000002065-9397.368ENSEBUG00000017073lsm69597.368Eptatretus_burgeri
ENSCSAVG00000002065-80100.000ENSEASG00005001533LSM669100.000Equus_asinus_asinus
ENSCSAVG00000002065-9397.368ENSECAG00000021036LSM69597.368Equus_caballus
ENSCSAVG00000002065-9368.421ENSEEUG00000002101LSM69668.421Erinaceus_europaeus
ENSCSAVG00000002065-9396.053ENSELUG00000014301LSM69596.053Esox_lucius
ENSCSAVG00000002065-9397.368ENSFCAG00000003047LSM69597.368Felis_catus
ENSCSAVG00000002065-9397.368ENSFALG00000005509LSM68797.368Ficedula_albicollis
ENSCSAVG00000002065-9385.526ENSFDAG00000019073-9585.526Fukomys_damarensis
ENSCSAVG00000002065-9397.368ENSFDAG00000020913-9597.368Fukomys_damarensis
ENSCSAVG00000002065-9396.053ENSFHEG00000007948lsm69596.053Fundulus_heteroclitus
ENSCSAVG00000002065-9396.053ENSGMOG00000015550lsm69596.053Gadus_morhua
ENSCSAVG00000002065-9397.368ENSGALG00000009985LSM69597.368Gallus_gallus
ENSCSAVG00000002065-9396.053ENSGAFG00000017763lsm69596.053Gambusia_affinis
ENSCSAVG00000002065-9494.805ENSGACG00000017223lsm69694.805Gasterosteus_aculeatus
ENSCSAVG00000002065-9397.368ENSGAGG00000020980LSM69597.368Gopherus_agassizii
ENSCSAVG00000002065-9397.368ENSGGOG00000001310LSM69597.368Gorilla_gorilla
ENSCSAVG00000002065-9396.053ENSHBUG00000008618lsm69596.053Haplochromis_burtoni
ENSCSAVG00000002065-9397.368ENSHGLG00000000205LSM69597.368Heterocephalus_glaber_female
ENSCSAVG00000002065-9397.368ENSHGLG00100014341LSM69597.368Heterocephalus_glaber_male
ENSCSAVG00000002065-9396.053ENSHCOG00000005591lsm69596.053Hippocampus_comes
ENSCSAVG00000002065-9396.053ENSIPUG00000004508lsm69596.053Ictalurus_punctatus
ENSCSAVG00000002065-9397.368ENSSTOG00000002678LSM69597.368Ictidomys_tridecemlineatus
ENSCSAVG00000002065-9397.368ENSJJAG00000013845-9597.368Jaculus_jaculus
ENSCSAVG00000002065-9575.641ENSJJAG00000016942-9975.641Jaculus_jaculus
ENSCSAVG00000002065-9389.474ENSJJAG00000011211-9589.474Jaculus_jaculus
ENSCSAVG00000002065-9396.053ENSKMAG00000004105lsm69596.053Kryptolebias_marmoratus
ENSCSAVG00000002065-9396.053ENSLBEG00000018441lsm69596.053Labrus_bergylta
ENSCSAVG00000002065-9397.368ENSLACG00000006937LSM69597.368Latimeria_chalumnae
ENSCSAVG00000002065-9394.737ENSLOCG00000017683-9594.737Lepisosteus_oculatus
ENSCSAVG00000002065-9396.053ENSLOCG00000008852lsm69596.053Lepisosteus_oculatus
ENSCSAVG00000002065-9397.368ENSLAFG00000001952LSM69597.368Loxodonta_africana
ENSCSAVG00000002065-9397.368ENSMFAG00000033073LSM69597.368Macaca_fascicularis
ENSCSAVG00000002065-9397.368ENSMNEG00000034820-9597.368Macaca_nemestrina
ENSCSAVG00000002065-9373.684ENSMNEG00000040412-9473.684Macaca_nemestrina
ENSCSAVG00000002065-9397.368ENSMLEG00000035153LSM69597.368Mandrillus_leucophaeus
ENSCSAVG00000002065-9396.053ENSMAMG00000014029lsm69596.053Mastacembelus_armatus
ENSCSAVG00000002065-9396.053ENSMZEG00005009146lsm69596.053Maylandia_zebra
ENSCSAVG00000002065-9397.368ENSMGAG00000003802LSM69597.368Meleagris_gallopavo
ENSCSAVG00000002065-9397.368ENSMAUG00000014938Lsm69597.368Mesocricetus_auratus
ENSCSAVG00000002065-9189.333ENSMICG00000047411-8889.333Microcebus_murinus
ENSCSAVG00000002065-9397.368ENSMICG00000042599LSM69597.368Microcebus_murinus
ENSCSAVG00000002065-9397.368ENSMOCG00000020049Lsm69597.368Microtus_ochrogaster
ENSCSAVG00000002065-9396.053ENSMMOG00000005470lsm69596.053Mola_mola
ENSCSAVG00000002065-9389.474ENSMMOG00000007379-9589.474Mola_mola
ENSCSAVG00000002065-9397.368ENSMODG00000000526LSM69597.368Monodelphis_domestica
ENSCSAVG00000002065-9396.053ENSMALG00000002419lsm69596.053Monopterus_albus
ENSCSAVG00000002065-9397.368MGP_CAROLIEiJ_G0031245Lsm69597.368Mus_caroli
ENSCSAVG00000002065-9397.368ENSMUSG00000031683Lsm69597.368Mus_musculus
ENSCSAVG00000002065-9397.368MGP_PahariEiJ_G0022851Lsm69597.368Mus_pahari
ENSCSAVG00000002065-9397.368MGP_SPRETEiJ_G0032365Lsm69597.368Mus_spretus
ENSCSAVG00000002065-9397.368ENSMPUG00000006936LSM68897.368Mustela_putorius_furo
ENSCSAVG00000002065-9397.368ENSMLUG00000026355LSM69597.368Myotis_lucifugus
ENSCSAVG00000002065-9397.368ENSNGAG00000019116Lsm69597.368Nannospalax_galili
ENSCSAVG00000002065-9396.053ENSNBRG00000004887lsm69596.053Neolamprologus_brichardi
ENSCSAVG00000002065-9397.368ENSNLEG00000005584LSM69597.368Nomascus_leucogenys
ENSCSAVG00000002065-9397.368ENSOPRG00000011199LSM69597.368Ochotona_princeps
ENSCSAVG00000002065-9396.053ENSODEG00000002307-9596.053Octodon_degus
ENSCSAVG00000002065-9086.486ENSODEG00000018684-9686.486Octodon_degus
ENSCSAVG00000002065-9394.737ENSODEG00000020420-9594.737Octodon_degus
ENSCSAVG00000002065-9396.053ENSODEG00000019419-9596.053Octodon_degus
ENSCSAVG00000002065-9396.053ENSONIG00000010005lsm69596.053Oreochromis_niloticus
ENSCSAVG00000002065-9371.053ENSOANG00000006894-9771.053Ornithorhynchus_anatinus
ENSCSAVG00000002065-9371.053ENSOANG00000006895-9771.053Ornithorhynchus_anatinus
ENSCSAVG00000002065-9396.053ENSORLG00000024158lsm69596.053Oryzias_latipes
ENSCSAVG00000002065-9396.053ENSORLG00020017383lsm69596.053Oryzias_latipes_hni
ENSCSAVG00000002065-9396.053ENSORLG00015016903lsm69596.053Oryzias_latipes_hsok
ENSCSAVG00000002065-9396.053ENSOMEG00000000074lsm69596.053Oryzias_melastigma
ENSCSAVG00000002065-9397.368ENSOGAG00000026665-9597.368Otolemur_garnettii
ENSCSAVG00000002065-9397.368ENSOGAG00000033153-9597.368Otolemur_garnettii
ENSCSAVG00000002065-80100.000ENSOARG00000008509-85100.000Ovis_aries
ENSCSAVG00000002065-9392.105ENSOARG00000011641-8892.105Ovis_aries
ENSCSAVG00000002065-9397.368ENSPPAG00000037929LSM69597.368Pan_paniscus
ENSCSAVG00000002065-9397.368ENSPPRG00000012806LSM69597.368Panthera_pardus
ENSCSAVG00000002065-9397.368ENSPTIG00000019769LSM69597.368Panthera_tigris_altaica
ENSCSAVG00000002065-9397.368ENSPTRG00000016488LSM69597.368Pan_troglodytes
ENSCSAVG00000002065-9397.368ENSPANG00000006552LSM69597.368Papio_anubis
ENSCSAVG00000002065-9396.053ENSPKIG00000016176lsm69596.053Paramormyrops_kingsleyae
ENSCSAVG00000002065-9397.368ENSPSIG00000016942LSM69597.368Pelodiscus_sinensis
ENSCSAVG00000002065-9396.053ENSPMGG00000018004lsm69596.053Periophthalmus_magnuspinnatus
ENSCSAVG00000002065-9397.368ENSPEMG00000012410Lsm69597.368Peromyscus_maniculatus_bairdii
ENSCSAVG00000002065-9397.368ENSPMAG00000006949lsm69597.368Petromyzon_marinus
ENSCSAVG00000002065-9397.368ENSPCIG00000023469LSM677100.000Phascolarctos_cinereus
ENSCSAVG00000002065-9396.053ENSPFOG00000008881lsm69596.053Poecilia_formosa
ENSCSAVG00000002065-9396.053ENSPLAG00000003202lsm69596.053Poecilia_latipinna
ENSCSAVG00000002065-9396.053ENSPMEG00000004000lsm69596.053Poecilia_mexicana
ENSCSAVG00000002065-9396.053ENSPREG00000023235lsm69596.053Poecilia_reticulata
ENSCSAVG00000002065-9397.368ENSPPYG00000015105LSM69597.368Pongo_abelii
ENSCSAVG00000002065-9397.368ENSPCOG00000013899LSM69597.368Propithecus_coquereli
ENSCSAVG00000002065-9396.053ENSPNYG00000012614lsm69596.053Pundamilia_nyererei
ENSCSAVG00000002065-9396.053ENSPNAG00000018779lsm69596.053Pygocentrus_nattereri
ENSCSAVG00000002065-9397.368ENSRNOG00000049370LOC1003607509597.368Rattus_norvegicus
ENSCSAVG00000002065-9397.368ENSRNOG00000030374Lsm69597.368Rattus_norvegicus
ENSCSAVG00000002065-9397.368ENSRBIG00000027878LSM69597.368Rhinopithecus_bieti
ENSCSAVG00000002065-9397.368ENSRROG00000024868LSM69597.368Rhinopithecus_roxellana
ENSCSAVG00000002065-8543.243YDR378C-8647.297Saccharomyces_cerevisiae
ENSCSAVG00000002065-9170.667ENSSBOG00000028103-9370.667Saimiri_boliviensis_boliviensis
ENSCSAVG00000002065-9397.368ENSSBOG00000021229-9597.368Saimiri_boliviensis_boliviensis
ENSCSAVG00000002065-9396.053ENSSFOG00015016480lsm69596.053Scleropages_formosus
ENSCSAVG00000002065-9396.053ENSSMAG00000004550lsm69596.053Scophthalmus_maximus
ENSCSAVG00000002065-8096.970ENSSLDG00000004136-5796.970Seriola_lalandi_dorsalis
ENSCSAVG00000002065-9396.053ENSSLDG00000020533lsm67996.053Seriola_lalandi_dorsalis
ENSCSAVG00000002065-5795.745ENSSARG00000000689LSM69895.745Sorex_araneus
ENSCSAVG00000002065-9397.368ENSSPUG00000008657LSM69597.368Sphenodon_punctatus
ENSCSAVG00000002065-9396.053ENSSPAG00000003246lsm69596.053Stegastes_partitus
ENSCSAVG00000002065-9397.368ENSSSCG00000035973LSM69597.368Sus_scrofa
ENSCSAVG00000002065-9397.368ENSTGUG00000002663LSM69597.368Taeniopygia_guttata
ENSCSAVG00000002065-9396.053ENSTRUG00000023398lsm69596.053Takifugu_rubripes
ENSCSAVG00000002065-9396.053ENSTNIG00000017725lsm69596.053Tetraodon_nigroviridis
ENSCSAVG00000002065-9397.368ENSTTRG00000004609LSM69597.368Tursiops_truncatus
ENSCSAVG00000002065-9488.312ENSUAMG00000014213LSM66388.312Ursus_americanus
ENSCSAVG00000002065-9488.312ENSUMAG00000015727LSM66388.312Ursus_maritimus
ENSCSAVG00000002065-9397.368ENSVPAG00000006922LSM69597.368Vicugna_pacos
ENSCSAVG00000002065-9397.368ENSVVUG00000009254LSM66597.368Vulpes_vulpes
ENSCSAVG00000002065-9397.368ENSXETG00000023683lsm69597.368Xenopus_tropicalis
ENSCSAVG00000002065-9396.053ENSXMAG00000009606lsm69596.053Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us