EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000002088 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
6705 bases
Position
chrreftig_107:416012-422716
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000003509MMR_HSR1PF01926.237.6e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000003564-1336-ENSCSAVP00000003509213 (aa)-H2YDW1
Gene Model
Click here to download ENSCSAVG00000002088's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002088's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000002088-9734.286ENSCSAVG00000009503-9734.286
ENSCSAVG00000002088-7533.333ENSCSAVG00000006042-7533.333
ENSCSAVG00000002088-9660.784ENSCSAVG00000000160-9160.784
ENSCSAVG00000002088-7230.380ENSCSAVG00000006409-5930.380
ENSCSAVG00000002088-7235.669ENSCSAVG00000005450-6935.669
ENSCSAVG00000002088-7346.154ENSCSAVG00000008995-9746.154
ENSCSAVG00000002088-10035.211ENSCSAVG00000005120-8137.306
ENSCSAVG00000002088-8236.111ENSCSAVG00000005689-8636.111
ENSCSAVG00000002088-7742.073ENSCSAVG00000010245-5842.073
ENSCSAVG00000002088-7736.628ENSCSAVG00000002804-8236.628
ENSCSAVG00000002088-7437.267ENSCSAVG00000007813-6137.267
ENSCSAVG00000002088-9737.220ENSCSAVG00000000613-8742.553
ENSCSAVG00000002088-9345.960ENSCSAVG00000009147-9645.960
ENSCSAVG00000002088-7837.349ENSCSAVG00000001356-6937.349
ENSCSAVG00000002088-9150.761ENSCSAVG00000010348-9650.761
ENSCSAVG00000002088-9038.384ENSCSAVG00000011162-9538.384
ENSCSAVG00000002088-8750.532ENSCSAVG00000008684-9050.532
ENSCSAVG00000002088-7442.405ENSCSAVG00000009128-7642.405
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000002088-9294.388ENSG00000104388RAB2A10090.610Homo_sapiens
ENSCSAVG00000002088-10084.259ENSG00000129472RAB2B10093.548Homo_sapiens
ENSCSAVG00000002088-10089.671ENSAPOG00000009138rab2a10089.671Acanthochromis_polyacanthus
ENSCSAVG00000002088-10083.796ENSAMEG00000006285RAB2B10083.796Ailuropoda_melanoleuca
ENSCSAVG00000002088-10089.671ENSAOCG00000014658rab2a10089.671Amphiprion_ocellaris
ENSCSAVG00000002088-10089.671ENSAPEG00000010294rab2a10089.671Amphiprion_percula
ENSCSAVG00000002088-10089.671ENSATEG00000002553rab2a9895.385Anabas_testudineus
ENSCSAVG00000002088-8975.132ENSACAG00000003034RAB2B9075.132Anolis_carolinensis
ENSCSAVG00000002088-9096.859ENSACAG00000005694RAB2A10090.141Anolis_carolinensis
ENSCSAVG00000002088-9294.388ENSANAG00000035405RAB2A10090.610Aotus_nancymaae
ENSCSAVG00000002088-10084.259ENSANAG00000018900RAB2B10084.259Aotus_nancymaae
ENSCSAVG00000002088-9294.872ENSAMXG00000036772rab2a10089.862Astyanax_mexicanus
ENSCSAVG00000002088-9282.653ENSBTAG00000000948RAB2A10079.343Bos_taurus
ENSCSAVG00000002088-10083.796ENSBTAG00000044207RAB2B10083.796Bos_taurus
ENSCSAVG00000002088-9295.385WBGene00006833unc-10810090.187Caenorhabditis_elegans
ENSCSAVG00000002088-10084.259ENSCJAG00000008981RAB2B10084.259Callithrix_jacchus
ENSCSAVG00000002088-9294.388ENSCAFG00000007153RAB2A9190.610Canis_familiaris
ENSCSAVG00000002088-10083.333ENSCAFG00000005641RAB2B10083.333Canis_familiaris
ENSCSAVG00000002088-8894.149ENSCAFG00020021797-9390.244Canis_lupus_dingo
ENSCSAVG00000002088-9294.388ENSCHIG00000020374RAB2A10090.141Capra_hircus
ENSCSAVG00000002088-10084.259ENSCHIG00000017531-10084.259Capra_hircus
ENSCSAVG00000002088-9294.388ENSTSYG00000030301RAB2A10090.610Carlito_syrichta
ENSCSAVG00000002088-10083.796ENSTSYG00000033832RAB2B10083.796Carlito_syrichta
ENSCSAVG00000002088-10085.648ENSCPOG00000026575RAB2B10085.648Cavia_porcellus
ENSCSAVG00000002088-9294.388ENSCCAG00000025945RAB2A10090.610Cebus_capucinus
ENSCSAVG00000002088-10068.519ENSCCAG00000028745RAB2B10068.519Cebus_capucinus
ENSCSAVG00000002088-10084.259ENSCATG00000044849RAB2B10084.259Cercocebus_atys
ENSCSAVG00000002088-9294.388ENSCATG00000028334RAB2A10090.610Cercocebus_atys
ENSCSAVG00000002088-9294.388ENSCLAG00000005708RAB2A10090.141Chinchilla_lanigera
ENSCSAVG00000002088-10083.796ENSCLAG00000002400RAB2B10083.796Chinchilla_lanigera
ENSCSAVG00000002088-10084.259ENSCSAG00000016480RAB2B10084.259Chlorocebus_sabaeus
ENSCSAVG00000002088-9294.388ENSCSAG00000014359RAB2A10090.610Chlorocebus_sabaeus
ENSCSAVG00000002088-10079.343ENSCHOG00000000710RAB2B10079.343Choloepus_hoffmanni
ENSCSAVG00000002088-9294.388ENSCPBG00000023254RAB2A10090.610Chrysemys_picta_bellii
ENSCSAVG00000002088-10083.721ENSCPBG00000012691RAB2B10083.721Chrysemys_picta_bellii
ENSCSAVG00000002088-85100.000ENSCING00000019877-91100.000Ciona_intestinalis
ENSCSAVG00000002088-10084.259ENSCANG00000029206RAB2B9986.829Colobus_angolensis_palliatus
ENSCSAVG00000002088-9294.388ENSCGRG00001020076Rab2a10090.610Cricetulus_griseus_chok1gshd
ENSCSAVG00000002088-10084.259ENSCGRG00001020833-10084.259Cricetulus_griseus_chok1gshd
ENSCSAVG00000002088-10084.259ENSCGRG00000010264-10084.259Cricetulus_griseus_crigri
ENSCSAVG00000002088-10089.671ENSCSEG00000017211rab2a10089.671Cynoglossus_semilaevis
ENSCSAVG00000002088-10089.401ENSCVAG00000017623rab2a10089.401Cyprinodon_variegatus
ENSCSAVG00000002088-9294.872ENSDARG00000020261rab2a10090.610Danio_rerio
ENSCSAVG00000002088-10084.722ENSDORG00000012048Rab2b10084.722Dipodomys_ordii
ENSCSAVG00000002088-9294.388ENSDORG00000025014Rab2a10090.141Dipodomys_ordii
ENSCSAVG00000002088-10087.793FBgn0014009Rab210087.793Drosophila_melanogaster
ENSCSAVG00000002088-10089.671ENSETEG00000010340RAB2A10089.671Echinops_telfairi
ENSCSAVG00000002088-9294.388ENSEASG00005016261RAB2A10090.610Equus_asinus_asinus
ENSCSAVG00000002088-10075.000ENSEASG00005011485RAB2B10075.000Equus_asinus_asinus
ENSCSAVG00000002088-10083.333ENSECAG00000006219RAB2B10083.333Equus_caballus
ENSCSAVG00000002088-9294.388ENSECAG00000012124RAB2A10090.610Equus_caballus
ENSCSAVG00000002088-9294.872ENSELUG00000023964rab2a10090.141Esox_lucius
ENSCSAVG00000002088-10083.796ENSFCAG00000007745RAB2B10083.796Felis_catus
ENSCSAVG00000002088-9294.388ENSFCAG00000024352RAB2A10090.610Felis_catus
ENSCSAVG00000002088-9294.388ENSFALG00000005613RAB2A10090.610Ficedula_albicollis
ENSCSAVG00000002088-10084.722ENSFDAG00000017456RAB2B10084.722Fukomys_damarensis
ENSCSAVG00000002088-10089.862ENSFHEG00000001296rab2a10089.862Fundulus_heteroclitus
ENSCSAVG00000002088-9294.388ENSGALG00000015450RAB2A9696.354Gallus_gallus
ENSCSAVG00000002088-10089.202ENSGAFG00000006846rab2a10089.202Gambusia_affinis
ENSCSAVG00000002088-10085.514ENSGACG00000014905rab2a10085.514Gasterosteus_aculeatus
ENSCSAVG00000002088-10084.186ENSGAGG00000023041RAB2B10084.186Gopherus_agassizii
ENSCSAVG00000002088-9293.878ENSGAGG00000005606RAB2A10090.141Gopherus_agassizii
ENSCSAVG00000002088-10084.259ENSGGOG00000014650RAB2B9986.829Gorilla_gorilla
ENSCSAVG00000002088-10089.671ENSGGOG00000043049RAB2A10090.610Gorilla_gorilla
ENSCSAVG00000002088-10090.141ENSHBUG00000019164rab2a10090.141Haplochromis_burtoni
ENSCSAVG00000002088-9984.259ENSHGLG00000004071RAB2B10084.259Heterocephalus_glaber_female
ENSCSAVG00000002088-9294.388ENSHGLG00000019399RAB2A10090.610Heterocephalus_glaber_female
ENSCSAVG00000002088-9294.388ENSHGLG00100015803RAB2A10090.610Heterocephalus_glaber_male
ENSCSAVG00000002088-10089.671ENSHCOG00000014428rab2a10090.141Hippocampus_comes
ENSCSAVG00000002088-9294.872ENSIPUG00000007539rab2a10089.862Ictalurus_punctatus
ENSCSAVG00000002088-10083.333ENSSTOG00000001886RAB2B10083.333Ictidomys_tridecemlineatus
ENSCSAVG00000002088-9294.388ENSJJAG00000000676Rab2a10090.610Jaculus_jaculus
ENSCSAVG00000002088-10089.671ENSKMAG00000009799rab2a10089.671Kryptolebias_marmoratus
ENSCSAVG00000002088-10089.671ENSLBEG00000020796rab2a10090.141Labrus_bergylta
ENSCSAVG00000002088-10089.671ENSLACG00000012521RAB2A10089.671Latimeria_chalumnae
ENSCSAVG00000002088-7593.125ENSLACG00000014446RAB2B9793.125Latimeria_chalumnae
ENSCSAVG00000002088-9294.388ENSLOCG00000005108rab2a10090.610Lepisosteus_oculatus
ENSCSAVG00000002088-9294.388ENSLAFG00000015567RAB2A10090.141Loxodonta_africana
ENSCSAVG00000002088-10084.259ENSMFAG00000027114RAB2B10084.259Macaca_fascicularis
ENSCSAVG00000002088-9294.388ENSMFAG00000037805RAB2A10090.610Macaca_fascicularis
ENSCSAVG00000002088-10084.259ENSMMUG00000014992RAB2B9986.829Macaca_mulatta
ENSCSAVG00000002088-9294.388ENSMMUG00000017038RAB2A9696.226Macaca_mulatta
ENSCSAVG00000002088-9294.388ENSMNEG00000037175RAB2A10090.610Macaca_nemestrina
ENSCSAVG00000002088-10084.259ENSMNEG00000032275RAB2B10084.259Macaca_nemestrina
ENSCSAVG00000002088-10084.259ENSMLEG00000043065RAB2B10084.259Mandrillus_leucophaeus
ENSCSAVG00000002088-10089.671ENSMAMG00000011549rab2a10090.323Mastacembelus_armatus
ENSCSAVG00000002088-10090.141ENSMZEG00005010611rab2a10090.141Maylandia_zebra
ENSCSAVG00000002088-9294.388ENSMAUG00000017792Rab2a10090.610Mesocricetus_auratus
ENSCSAVG00000002088-9294.388ENSMICG00000034540RAB2A10090.610Microcebus_murinus
ENSCSAVG00000002088-9294.388ENSMOCG00000014140Rab2a10090.610Microtus_ochrogaster
ENSCSAVG00000002088-10084.259ENSMOCG00000013161Rab2b10084.259Microtus_ochrogaster
ENSCSAVG00000002088-9294.388ENSMODG00000008556RAB2A10090.141Monodelphis_domestica
ENSCSAVG00000002088-10083.333ENSMODG00000006121RAB2B10084.332Monodelphis_domestica
ENSCSAVG00000002088-10089.671ENSMALG00000004342rab2a10090.141Monopterus_albus
ENSCSAVG00000002088-10085.253MGP_CAROLIEiJ_G0019238Rab2b10085.253Mus_caroli
ENSCSAVG00000002088-9493.035MGP_CAROLIEiJ_G0025796Rab2a10090.610Mus_caroli
ENSCSAVG00000002088-9493.035ENSMUSG00000047187Rab2a10090.610Mus_musculus
ENSCSAVG00000002088-10084.793ENSMUSG00000022159Rab2b10084.793Mus_musculus
ENSCSAVG00000002088-10083.796MGP_PahariEiJ_G0030259Rab2b10083.796Mus_pahari
ENSCSAVG00000002088-9493.035MGP_PahariEiJ_G0023919Rab2a10090.610Mus_pahari
ENSCSAVG00000002088-10084.793MGP_SPRETEiJ_G0020130Rab2b10084.793Mus_spretus
ENSCSAVG00000002088-9493.035MGP_SPRETEiJ_G0026744Rab2a10090.610Mus_spretus
ENSCSAVG00000002088-9983.333ENSMPUG00000000177RAB2B9883.333Mustela_putorius_furo
ENSCSAVG00000002088-9294.388ENSMLUG00000002855RAB2A10090.610Myotis_lucifugus
ENSCSAVG00000002088-10083.796ENSMLUG00000001902RAB2B10083.796Myotis_lucifugus
ENSCSAVG00000002088-10084.722ENSNGAG00000017091Rab2b10084.722Nannospalax_galili
ENSCSAVG00000002088-9294.388ENSNGAG00000020764Rab2a10090.610Nannospalax_galili
ENSCSAVG00000002088-10089.401ENSNBRG00000001241rab2a10089.401Neolamprologus_brichardi
ENSCSAVG00000002088-9294.388ENSNLEG00000036148RAB2A10090.610Nomascus_leucogenys
ENSCSAVG00000002088-10084.259ENSNLEG00000014534RAB2B9986.829Nomascus_leucogenys
ENSCSAVG00000002088-10082.870ENSMEUG00000010489RAB2B10084.332Notamacropus_eugenii
ENSCSAVG00000002088-10084.651ENSOPRG00000016163RAB2B10084.651Ochotona_princeps
ENSCSAVG00000002088-9786.473ENSODEG00000016788-9691.579Octodon_degus
ENSCSAVG00000002088-9294.388ENSODEG00000002369-10090.610Octodon_degus
ENSCSAVG00000002088-10083.796ENSODEG00000001343RAB2B10083.796Octodon_degus
ENSCSAVG00000002088-10089.671ENSONIG00000016622rab2a10089.671Oreochromis_niloticus
ENSCSAVG00000002088-9295.385ENSOANG00000005041RAB2A10091.080Ornithorhynchus_anatinus
ENSCSAVG00000002088-10083.721ENSOCUG00000000331RAB2B10083.721Oryctolagus_cuniculus
ENSCSAVG00000002088-10089.401ENSORLG00000013432rab2a10089.401Oryzias_latipes
ENSCSAVG00000002088-10089.401ENSORLG00020020035rab2a10089.401Oryzias_latipes_hni
ENSCSAVG00000002088-10089.401ENSORLG00015020900rab2a10089.401Oryzias_latipes_hsok
ENSCSAVG00000002088-10089.401ENSOMEG00000016752rab2a10089.401Oryzias_melastigma
ENSCSAVG00000002088-10083.333ENSOGAG00000002728-10083.333Otolemur_garnettii
ENSCSAVG00000002088-9983.721ENSOARG00000019625RAB2B9883.721Ovis_aries
ENSCSAVG00000002088-10084.259ENSPPAG00000035840RAB2B10084.259Pan_paniscus
ENSCSAVG00000002088-9294.388ENSPPRG00000012945RAB2A10090.610Panthera_pardus
ENSCSAVG00000002088-10083.796ENSPPRG00000005831RAB2B10083.796Panthera_pardus
ENSCSAVG00000002088-10083.796ENSPTIG00000021935RAB2B10083.796Panthera_tigris_altaica
ENSCSAVG00000002088-9294.388ENSPTRG00000020284RAB2A10090.610Pan_troglodytes
ENSCSAVG00000002088-8591.713ENSPTRG00000006125-10091.713Pan_troglodytes
ENSCSAVG00000002088-9294.388ENSPANG00000021867RAB2A10090.610Papio_anubis
ENSCSAVG00000002088-10084.259ENSPANG00000021789RAB2B10084.259Papio_anubis
ENSCSAVG00000002088-10089.671ENSPKIG00000005764RAB2A10089.671Paramormyrops_kingsleyae
ENSCSAVG00000002088-10090.141ENSPKIG00000009739rab2a10090.610Paramormyrops_kingsleyae
ENSCSAVG00000002088-9293.878ENSPSIG00000011994RAB2A10090.141Pelodiscus_sinensis
ENSCSAVG00000002088-10090.141ENSPMAG00000006171-10090.141Petromyzon_marinus
ENSCSAVG00000002088-8493.855ENSPMAG00000008764RAB2B9793.855Petromyzon_marinus
ENSCSAVG00000002088-10082.870ENSPCIG00000021943RAB2B10084.332Phascolarctos_cinereus
ENSCSAVG00000002088-8589.796ENSPCIG00000000024-8489.796Phascolarctos_cinereus
ENSCSAVG00000002088-10089.671ENSPFOG00000004786rab2a10089.671Poecilia_formosa
ENSCSAVG00000002088-10089.671ENSPLAG00000023374rab2a10089.671Poecilia_latipinna
ENSCSAVG00000002088-10089.671ENSPREG00000014888rab2a10089.671Poecilia_reticulata
ENSCSAVG00000002088-10083.333ENSPPYG00000005597RAB2B10083.333Pongo_abelii
ENSCSAVG00000002088-9294.388ENSPPYG00000018617RAB2A10090.610Pongo_abelii
ENSCSAVG00000002088-9294.388ENSPCOG00000020717RAB2A10090.610Propithecus_coquereli
ENSCSAVG00000002088-10083.333ENSPVAG00000000273RAB2B10083.333Pteropus_vampyrus
ENSCSAVG00000002088-10090.141ENSPNYG00000012426rab2a10090.141Pundamilia_nyererei
ENSCSAVG00000002088-9294.872ENSPNAG00000011193rab2a10089.862Pygocentrus_nattereri
ENSCSAVG00000002088-10083.796ENSRNOG00000012488Rab2b10083.796Rattus_norvegicus
ENSCSAVG00000002088-8994.737ENSRNOG00000005963Rab2a10091.304Rattus_norvegicus
ENSCSAVG00000002088-10084.259ENSRBIG00000027517RAB2B9986.829Rhinopithecus_bieti
ENSCSAVG00000002088-9294.388ENSRBIG00000037603RAB2A10090.141Rhinopithecus_bieti
ENSCSAVG00000002088-10084.259ENSRROG00000039326RAB2B9986.829Rhinopithecus_roxellana
ENSCSAVG00000002088-9294.388ENSRROG00000031181RAB2A10090.610Rhinopithecus_roxellana
ENSCSAVG00000002088-10068.519ENSSBOG00000034839RAB2B10068.519Saimiri_boliviensis_boliviensis
ENSCSAVG00000002088-9294.388ENSSBOG00000025313RAB2A10090.610Saimiri_boliviensis_boliviensis
ENSCSAVG00000002088-10082.791ENSSHAG00000013149-10082.791Sarcophilus_harrisii
ENSCSAVG00000002088-9294.388ENSSFOG00015015034rab2a10091.080Scleropages_formosus
ENSCSAVG00000002088-10089.671ENSSFOG00015000865-10089.671Scleropages_formosus
ENSCSAVG00000002088-10089.671ENSSMAG00000001002rab2a10090.141Scophthalmus_maximus
ENSCSAVG00000002088-10089.671ENSSDUG00000013724rab2a10090.141Seriola_dumerili
ENSCSAVG00000002088-10089.671ENSSLDG00000022555rab2a10090.141Seriola_lalandi_dorsalis
ENSCSAVG00000002088-10083.410ENSSPUG00000010112RAB2B10085.714Sphenodon_punctatus
ENSCSAVG00000002088-10083.333ENSSSCG00000029544RAB2B10083.333Sus_scrofa
ENSCSAVG00000002088-9294.388ENSSSCG00000006232RAB2A10090.141Sus_scrofa
ENSCSAVG00000002088-9294.388ENSTGUG00000011182RAB2A10090.610Taeniopygia_guttata
ENSCSAVG00000002088-10090.141ENSTRUG00000003363rab2a10090.141Takifugu_rubripes
ENSCSAVG00000002088-10087.850ENSTNIG00000003472rab2a10088.532Tetraodon_nigroviridis
ENSCSAVG00000002088-10083.796ENSUMAG00000004940RAB2B10083.796Ursus_maritimus
ENSCSAVG00000002088-10081.776ENSVPAG00000007360RAB2B10081.776Vicugna_pacos
ENSCSAVG00000002088-9294.388ENSVVUG00000018053-10090.610Vulpes_vulpes
ENSCSAVG00000002088-9391.414ENSVVUG00000011426-9491.414Vulpes_vulpes
ENSCSAVG00000002088-10084.651ENSXETG00000017184rab2b10084.651Xenopus_tropicalis
ENSCSAVG00000002088-10089.862ENSXMAG00000024267rab2a10089.862Xiphophorus_maculatus

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