EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000002146 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3963 bases
Position: chrreftig_31:702863-706825
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003619	TUDOR	PF00567.24	1.9e-08	1	1
ENSCSAVP00000003618	TUDOR	PF00567.24	2.1e-08	1	1
ENSCSAVP00000003618	DEAD	PF00270.29	5e-10	1	1
ENSCSAVP00000003619	HA2	PF04408.23	4.2e-10	1	1
ENSCSAVP00000003618	HA2	PF04408.23	5.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003673	-	3630	-	ENSCSAVP00000003618	1210 (aa)	-	H2YE70
ENSCSAVT00000003674	-	2613	-	ENSCSAVP00000003619	871 (aa)	-	H2YE71

Gene Model

Click here to download ENSCSAVG00000002146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002146	-	50	30.449	ENSCSAVG00000003870	-	64	30.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002146	-	100	39.086	ENSG00000156414	TDRD9	99	37.108	Homo_sapiens
ENSCSAVG00000002146	-	96	39.984	ENSAPOG00000015220	tdrd9	92	39.984	Acanthochromis_polyacanthus
ENSCSAVG00000002146	-	100	38.959	ENSAMEG00000018095	TDRD9	90	38.959	Ailuropoda_melanoleuca
ENSCSAVG00000002146	-	98	34.002	ENSACIG00000024299	tdrd9	98	34.027	Amphilophus_citrinellus
ENSCSAVG00000002146	-	96	38.903	ENSAOCG00000007386	tdrd9	94	38.820	Amphiprion_ocellaris
ENSCSAVG00000002146	-	96	37.705	ENSAPEG00000023023	tdrd9	92	37.705	Amphiprion_percula
ENSCSAVG00000002146	-	99	38.310	ENSATEG00000015827	tdrd9	97	38.310	Anabas_testudineus
ENSCSAVG00000002146	-	95	36.470	ENSAPLG00000007429	TDRD9	99	36.470	Anas_platyrhynchos
ENSCSAVG00000002146	-	100	39.953	ENSACAG00000010862	TDRD9	92	39.953	Anolis_carolinensis
ENSCSAVG00000002146	-	100	37.746	ENSANAG00000020949	TDRD9	96	37.746	Aotus_nancymaae
ENSCSAVG00000002146	-	97	37.632	ENSACLG00000020660	tdrd9	91	37.632	Astatotilapia_calliptera
ENSCSAVG00000002146	-	93	37.833	ENSAMXG00000021360	tdrd9	93	37.750	Astyanax_mexicanus
ENSCSAVG00000002146	-	100	37.362	ENSBTAG00000020402	TDRD9	93	38.230	Bos_taurus
ENSCSAVG00000002146	-	100	38.510	ENSCJAG00000017235	TDRD9	95	38.510	Callithrix_jacchus
ENSCSAVG00000002146	-	90	37.034	ENSCAFG00000018311	TDRD9	99	37.248	Canis_familiaris
ENSCSAVG00000002146	-	100	38.950	ENSCAFG00020008631	TDRD9	99	36.473	Canis_lupus_dingo
ENSCSAVG00000002146	-	100	38.898	ENSCHIG00000011541	TDRD9	91	38.898	Capra_hircus
ENSCSAVG00000002146	-	100	39.100	ENSTSYG00000003253	TDRD9	99	37.233	Carlito_syrichta
ENSCSAVG00000002146	-	100	36.871	ENSCAPG00000009518	TDRD9	91	36.871	Cavia_aperea
ENSCSAVG00000002146	-	100	39.038	ENSCPOG00000002760	TDRD9	92	39.038	Cavia_porcellus
ENSCSAVG00000002146	-	100	38.959	ENSCCAG00000022528	TDRD9	90	38.959	Cebus_capucinus
ENSCSAVG00000002146	-	100	39.007	ENSCATG00000032905	TDRD9	90	39.007	Cercocebus_atys
ENSCSAVG00000002146	-	100	39.249	ENSCLAG00000006616	TDRD9	92	39.249	Chinchilla_lanigera
ENSCSAVG00000002146	-	100	39.007	ENSCSAG00000009835	TDRD9	90	39.007	Chlorocebus_sabaeus
ENSCSAVG00000002146	-	86	43.052	ENSCPBG00000020203	TDRD9	88	43.052	Chrysemys_picta_bellii
ENSCSAVG00000002146	-	100	73.399	ENSCING00000019779	-	99	73.399	Ciona_intestinalis
ENSCSAVG00000002146	-	100	39.192	ENSCANG00000031870	TDRD9	95	39.192	Colobus_angolensis_palliatus
ENSCSAVG00000002146	-	100	39.069	ENSCGRG00001023336	Tdrd9	90	39.069	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002146	-	100	39.069	ENSCGRG00000004013	Tdrd9	90	39.069	Cricetulus_griseus_crigri
ENSCSAVG00000002146	-	97	37.842	ENSCSEG00000001411	tdrd9	93	37.842	Cynoglossus_semilaevis
ENSCSAVG00000002146	-	97	37.088	ENSCVAG00000007427	tdrd9	97	37.088	Cyprinodon_variegatus
ENSCSAVG00000002146	-	100	37.983	ENSDARG00000013453	tdrd9	93	37.983	Danio_rerio
ENSCSAVG00000002146	-	100	39.572	ENSDORG00000015167	Tdrd9	90	39.509	Dipodomys_ordii
ENSCSAVG00000002146	-	81	40.634	FBgn0003483	spn-E	71	40.634	Drosophila_melanogaster
ENSCSAVG00000002146	-	81	38.636	ENSETEG00000015130	TDRD9	89	37.091	Echinops_telfairi
ENSCSAVG00000002146	-	93	40.763	ENSEBUG00000010711	tdrd9	87	40.763	Eptatretus_burgeri
ENSCSAVG00000002146	-	100	38.565	ENSEASG00005004203	TDRD9	99	35.288	Equus_asinus_asinus
ENSCSAVG00000002146	-	100	38.876	ENSECAG00000023843	TDRD9	99	35.706	Equus_caballus
ENSCSAVG00000002146	-	100	38.575	ENSELUG00000010798	tdrd9	97	38.450	Esox_lucius
ENSCSAVG00000002146	-	100	38.692	ENSFCAG00000013807	TDRD9	91	38.976	Felis_catus
ENSCSAVG00000002146	-	100	37.078	ENSFALG00000002911	TDRD9	99	37.078	Ficedula_albicollis
ENSCSAVG00000002146	-	100	39.500	ENSFDAG00000004582	TDRD9	91	39.500	Fukomys_damarensis
ENSCSAVG00000002146	-	90	52.632	ENSFHEG00000008883	tdrd9	99	52.632	Fundulus_heteroclitus
ENSCSAVG00000002146	-	85	48.214	ENSGMOG00000010725	tdrd9	89	48.214	Gadus_morhua
ENSCSAVG00000002146	-	89	35.185	ENSGALG00000011565	TDRD9	94	35.323	Gallus_gallus
ENSCSAVG00000002146	-	99	36.344	ENSGACG00000008322	tdrd9	96	50.230	Gasterosteus_aculeatus
ENSCSAVG00000002146	-	100	39.086	ENSGGOG00000000812	TDRD9	90	39.086	Gorilla_gorilla
ENSCSAVG00000002146	-	69	33.758	ENSHBUG00000022779	tdrd9	96	34.721	Haplochromis_burtoni
ENSCSAVG00000002146	-	100	38.631	ENSHGLG00000007727	TDRD9	91	38.631	Heterocephalus_glaber_female
ENSCSAVG00000002146	-	100	38.631	ENSHGLG00100019237	TDRD9	91	38.631	Heterocephalus_glaber_male
ENSCSAVG00000002146	-	89	36.848	ENSHCOG00000020886	tdrd9	99	34.067	Hippocampus_comes
ENSCSAVG00000002146	-	100	38.132	ENSIPUG00000002814	tdrd9	94	37.899	Ictalurus_punctatus
ENSCSAVG00000002146	-	100	39.069	ENSSTOG00000007890	TDRD9	90	39.069	Ictidomys_tridecemlineatus
ENSCSAVG00000002146	-	100	38.570	ENSJJAG00000022462	Tdrd9	90	38.570	Jaculus_jaculus
ENSCSAVG00000002146	-	99	37.823	ENSKMAG00000005523	tdrd9	99	37.823	Kryptolebias_marmoratus
ENSCSAVG00000002146	-	96	38.154	ENSLBEG00000022006	tdrd9	91	37.704	Labrus_bergylta
ENSCSAVG00000002146	-	100	36.593	ENSLACG00000002257	TDRD9	98	36.593	Latimeria_chalumnae
ENSCSAVG00000002146	-	99	37.549	ENSLOCG00000009992	tdrd9	99	37.549	Lepisosteus_oculatus
ENSCSAVG00000002146	-	95	38.640	ENSLAFG00000007580	TDRD9	92	48.741	Loxodonta_africana
ENSCSAVG00000002146	-	100	39.007	ENSMFAG00000001293	TDRD9	99	37.220	Macaca_fascicularis
ENSCSAVG00000002146	-	100	39.007	ENSMMUG00000006243	TDRD9	99	37.191	Macaca_mulatta
ENSCSAVG00000002146	-	100	39.007	ENSMNEG00000044098	TDRD9	90	39.007	Macaca_nemestrina
ENSCSAVG00000002146	-	100	39.007	ENSMLEG00000032473	TDRD9	95	39.007	Mandrillus_leucophaeus
ENSCSAVG00000002146	-	100	37.618	ENSMAMG00000002068	tdrd9	95	37.618	Mastacembelus_armatus
ENSCSAVG00000002146	-	97	39.433	ENSMZEG00005007746	tdrd9	91	39.514	Maylandia_zebra
ENSCSAVG00000002146	-	100	38.256	ENSMGAG00000013431	TDRD9	99	38.256	Meleagris_gallopavo
ENSCSAVG00000002146	-	100	37.760	ENSMAUG00000020617	Tdrd9	89	37.540	Mesocricetus_auratus
ENSCSAVG00000002146	-	100	39.100	ENSMICG00000000428	TDRD9	90	39.100	Microcebus_murinus
ENSCSAVG00000002146	-	100	38.893	ENSMOCG00000017012	Tdrd9	90	38.893	Microtus_ochrogaster
ENSCSAVG00000002146	-	100	38.971	ENSMMOG00000013849	tdrd9	96	38.971	Mola_mola
ENSCSAVG00000002146	-	68	34.205	ENSMODG00000013609	TDRD9	99	34.205	Monodelphis_domestica
ENSCSAVG00000002146	-	96	37.713	ENSMALG00000008927	tdrd9	90	38.041	Monopterus_albus
ENSCSAVG00000002146	-	100	38.468	MGP_CAROLIEiJ_G0018145	Tdrd9	98	50.379	Mus_caroli
ENSCSAVG00000002146	-	100	38.389	ENSMUSG00000054003	Tdrd9	97	50.379	Mus_musculus
ENSCSAVG00000002146	-	100	38.753	MGP_PahariEiJ_G0029902	Tdrd9	98	50.189	Mus_pahari
ENSCSAVG00000002146	-	100	38.310	MGP_SPRETEiJ_G0018994	Tdrd9	98	50.189	Mus_spretus
ENSCSAVG00000002146	-	92	37.928	ENSMPUG00000002286	TDRD9	99	37.928	Mustela_putorius_furo
ENSCSAVG00000002146	-	87	40.076	ENSMLUG00000011984	TDRD9	95	39.677	Myotis_lucifugus
ENSCSAVG00000002146	-	100	39.076	ENSNGAG00000021858	Tdrd9	91	39.076	Nannospalax_galili
ENSCSAVG00000002146	-	100	37.785	ENSNBRG00000008735	tdrd9	99	37.785	Neolamprologus_brichardi
ENSCSAVG00000002146	-	100	39.165	ENSNLEG00000016251	TDRD9	90	39.165	Nomascus_leucogenys
ENSCSAVG00000002146	-	87	33.501	ENSMEUG00000014017	-	89	33.130	Notamacropus_eugenii
ENSCSAVG00000002146	-	100	38.963	ENSODEG00000002255	TDRD9	91	38.928	Octodon_degus
ENSCSAVG00000002146	-	100	38.564	ENSONIG00000020126	tdrd9	93	38.564	Oreochromis_niloticus
ENSCSAVG00000002146	-	87	39.322	ENSOANG00000000797	TDRD9	99	36.993	Ornithorhynchus_anatinus
ENSCSAVG00000002146	-	100	37.983	ENSOCUG00000014788	TDRD9	94	37.983	Oryctolagus_cuniculus
ENSCSAVG00000002146	-	87	35.180	ENSORLG00000015842	tdrd9	93	34.815	Oryzias_latipes
ENSCSAVG00000002146	-	98	37.315	ENSORLG00020009475	tdrd9	98	37.315	Oryzias_latipes_hni
ENSCSAVG00000002146	-	87	36.611	ENSORLG00015008417	tdrd9	97	34.778	Oryzias_latipes_hsok
ENSCSAVG00000002146	-	100	37.421	ENSOMEG00000006369	tdrd9	94	37.421	Oryzias_melastigma
ENSCSAVG00000002146	-	100	38.492	ENSOGAG00000007626	TDRD9	89	38.649	Otolemur_garnettii
ENSCSAVG00000002146	-	98	39.291	ENSOARG00000006675	TDRD9	91	39.291	Ovis_aries
ENSCSAVG00000002146	-	100	39.165	ENSPPAG00000027180	TDRD9	95	39.165	Pan_paniscus
ENSCSAVG00000002146	-	100	38.638	ENSPPRG00000021286	TDRD9	91	38.717	Panthera_pardus
ENSCSAVG00000002146	-	90	43.084	ENSPTIG00000017411	TDRD9	83	43.197	Panthera_tigris_altaica
ENSCSAVG00000002146	-	100	39.209	ENSPTRG00000006765	TDRD9	90	39.209	Pan_troglodytes
ENSCSAVG00000002146	-	100	38.928	ENSPANG00000004811	TDRD9	99	34.884	Papio_anubis
ENSCSAVG00000002146	-	100	38.173	ENSPKIG00000017763	tdrd9	93	38.173	Paramormyrops_kingsleyae
ENSCSAVG00000002146	-	100	39.216	ENSPSIG00000010466	TDRD9	98	39.216	Pelodiscus_sinensis
ENSCSAVG00000002146	-	92	40.343	ENSPMGG00000010265	tdrd9	94	40.343	Periophthalmus_magnuspinnatus
ENSCSAVG00000002146	-	100	38.963	ENSPEMG00000012496	Tdrd9	90	38.963	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002146	-	70	33.516	ENSPCIG00000016427	TDRD9	99	33.516	Phascolarctos_cinereus
ENSCSAVG00000002146	-	100	38.121	ENSPFOG00000002400	tdrd9	99	38.121	Poecilia_formosa
ENSCSAVG00000002146	-	93	38.425	ENSPLAG00000005202	tdrd9	99	37.040	Poecilia_latipinna
ENSCSAVG00000002146	-	93	38.543	ENSPMEG00000017922	tdrd9	99	37.040	Poecilia_mexicana
ENSCSAVG00000002146	-	89	37.055	ENSPREG00000015184	tdrd9	95	37.055	Poecilia_reticulata
ENSCSAVG00000002146	-	99	37.419	ENSPPYG00000006180	-	99	37.419	Pongo_abelii
ENSCSAVG00000002146	-	93	37.332	ENSPCOG00000015323	TDRD9	89	37.332	Propithecus_coquereli
ENSCSAVG00000002146	-	59	46.591	ENSPVAG00000011551	-	60	46.591	Pteropus_vampyrus
ENSCSAVG00000002146	-	97	38.288	ENSPNYG00000022319	tdrd9	95	38.048	Pundamilia_nyererei
ENSCSAVG00000002146	-	100	38.036	ENSPNAG00000010714	tdrd9	94	37.896	Pygocentrus_nattereri
ENSCSAVG00000002146	-	100	38.310	ENSRNOG00000053631	Tdrd9	90	38.310	Rattus_norvegicus
ENSCSAVG00000002146	-	100	39.086	ENSRBIG00000040614	TDRD9	99	36.819	Rhinopithecus_bieti
ENSCSAVG00000002146	-	100	38.928	ENSRROG00000037241	TDRD9	90	38.928	Rhinopithecus_roxellana
ENSCSAVG00000002146	-	100	38.613	ENSSBOG00000027466	TDRD9	95	38.613	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002146	-	90	37.511	ENSSHAG00000013742	TDRD9	99	37.511	Sarcophilus_harrisii
ENSCSAVG00000002146	-	97	38.736	ENSSFOG00015012742	tdrd9	88	43.192	Scleropages_formosus
ENSCSAVG00000002146	-	100	37.510	ENSSMAG00000001831	tdrd9	99	36.928	Scophthalmus_maximus
ENSCSAVG00000002146	-	96	37.552	ENSSDUG00000000483	tdrd9	94	37.552	Seriola_dumerili
ENSCSAVG00000002146	-	97	38.412	ENSSLDG00000011875	tdrd9	94	38.412	Seriola_lalandi_dorsalis
ENSCSAVG00000002146	-	97	37.070	ENSSPUG00000004504	TDRD9	98	37.070	Sphenodon_punctatus
ENSCSAVG00000002146	-	100	36.994	ENSSPAG00000012556	tdrd9	94	37.692	Stegastes_partitus
ENSCSAVG00000002146	-	100	39.336	ENSSSCG00000002552	TDRD9	90	39.336	Sus_scrofa
ENSCSAVG00000002146	-	95	36.000	ENSTGUG00000012887	-	99	36.000	Taeniopygia_guttata
ENSCSAVG00000002146	-	96	35.954	ENSTRUG00000009586	tdrd9	91	35.954	Takifugu_rubripes
ENSCSAVG00000002146	-	95	36.207	ENSTNIG00000017353	tdrd9	99	36.207	Tetraodon_nigroviridis
ENSCSAVG00000002146	-	99	37.744	ENSTTRG00000006405	TDRD9	99	37.744	Tursiops_truncatus
ENSCSAVG00000002146	-	100	38.801	ENSUAMG00000017361	TDRD9	99	36.976	Ursus_americanus
ENSCSAVG00000002146	-	100	38.880	ENSUMAG00000024822	TDRD9	99	36.976	Ursus_maritimus
ENSCSAVG00000002146	-	99	39.196	ENSVVUG00000002584	TDRD9	99	39.196	Vulpes_vulpes
ENSCSAVG00000002146	-	93	37.374	ENSXETG00000023069	tdrd9	99	37.374	Xenopus_tropicalis
ENSCSAVG00000002146	-	100	37.832	ENSXCOG00000009311	tdrd9	99	37.832	Xiphophorus_couchianus
ENSCSAVG00000002146	-	100	37.832	ENSXMAG00000018300	tdrd9	99	37.832	Xiphophorus_maculatus