EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002211 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1479 bases
Position: chrreftig_12:952272-953750
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003732	PseudoU_synth_1	PF01416.20	7.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003789	-	1323	-	ENSCSAVP00000003732	441 (aa)	-	H2YEI4

Gene Model

Click here to download ENSCSAVG00000002211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002211	-	95	34.813	ENSG00000110060	PUS3	85	40.789	Homo_sapiens
ENSCSAVG00000002211	-	95	34.679	ENSAPOG00000019483	pus3	90	34.928	Acanthochromis_polyacanthus
ENSCSAVG00000002211	-	94	36.190	ENSAMEG00000000144	PUS3	85	35.849	Ailuropoda_melanoleuca
ENSCSAVG00000002211	-	67	42.810	ENSACIG00000024479	pus3	93	42.807	Amphilophus_citrinellus
ENSCSAVG00000002211	-	95	35.681	ENSAOCG00000006589	pus3	82	35.681	Amphiprion_ocellaris
ENSCSAVG00000002211	-	90	36.453	ENSAPEG00000014617	pus3	78	36.453	Amphiprion_percula
ENSCSAVG00000002211	-	90	35.162	ENSATEG00000022731	pus3	80	35.162	Anabas_testudineus
ENSCSAVG00000002211	-	97	34.732	ENSAPLG00000013285	PUS3	93	34.499	Anas_platyrhynchos
ENSCSAVG00000002211	-	90	36.908	ENSACAG00000000186	PUS3	85	36.908	Anolis_carolinensis
ENSCSAVG00000002211	-	95	34.579	ENSANAG00000035614	PUS3	85	34.112	Aotus_nancymaae
ENSCSAVG00000002211	-	95	35.377	ENSACLG00000007356	pus3	84	35.142	Astatotilapia_calliptera
ENSCSAVG00000002211	-	90	32.688	ENSAMXG00000019534	pus3	78	32.688	Astyanax_mexicanus
ENSCSAVG00000002211	-	94	36.905	ENSBTAG00000014339	PUS3	85	36.557	Bos_taurus
ENSCSAVG00000002211	-	72	32.099	WBGene00006473	tag-124	79	32.099	Caenorhabditis_elegans
ENSCSAVG00000002211	-	95	34.965	ENSCJAG00000046645	PUS3	85	34.346	Callithrix_jacchus
ENSCSAVG00000002211	-	94	36.085	ENSCAFG00000010534	PUS3	85	36.085	Canis_familiaris
ENSCSAVG00000002211	-	94	36.085	ENSCAFG00020010659	PUS3	85	36.085	Canis_lupus_dingo
ENSCSAVG00000002211	-	94	36.905	ENSCHIG00000012260	PUS3	85	36.557	Capra_hircus
ENSCSAVG00000002211	-	94	35.952	ENSTSYG00000014744	PUS3	84	35.613	Carlito_syrichta
ENSCSAVG00000002211	-	95	35.748	ENSCAPG00000012231	PUS3	85	35.748	Cavia_aperea
ENSCSAVG00000002211	-	95	35.748	ENSCPOG00000032587	PUS3	85	35.748	Cavia_porcellus
ENSCSAVG00000002211	-	95	34.813	ENSCCAG00000035999	PUS3	85	34.346	Cebus_capucinus
ENSCSAVG00000002211	-	95	35.581	ENSCATG00000043123	PUS3	85	35.116	Cercocebus_atys
ENSCSAVG00000002211	-	95	34.803	ENSCLAG00000014947	PUS3	85	34.571	Chinchilla_lanigera
ENSCSAVG00000002211	-	95	35.047	ENSCSAG00000002281	PUS3	85	35.116	Chlorocebus_sabaeus
ENSCSAVG00000002211	-	77	38.728	ENSCHOG00000008442	PUS3	90	38.439	Choloepus_hoffmanni
ENSCSAVG00000002211	-	52	31.760	ENSCPBG00000011173	PUS3	80	30.901	Chrysemys_picta_bellii
ENSCSAVG00000002211	-	63	36.859	ENSCING00000009062	-	60	36.218	Ciona_intestinalis
ENSCSAVG00000002211	-	95	34.670	ENSCANG00000038729	PUS3	85	34.198	Colobus_angolensis_palliatus
ENSCSAVG00000002211	-	95	36.620	ENSCGRG00001019842	Pus3	85	36.279	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002211	-	95	36.385	ENSCGRG00000010155	Pus3	85	36.047	Cricetulus_griseus_crigri
ENSCSAVG00000002211	-	89	36.591	ENSCSEG00000007948	pus3	86	35.697	Cynoglossus_semilaevis
ENSCSAVG00000002211	-	95	33.488	ENSCVAG00000022150	pus3	83	33.256	Cyprinodon_variegatus
ENSCSAVG00000002211	-	94	34.615	ENSDARG00000028976	pus3	84	34.615	Danio_rerio
ENSCSAVG00000002211	-	89	35.768	ENSDNOG00000040719	PUS3	80	35.661	Dasypus_novemcinctus
ENSCSAVG00000002211	-	89	36.725	ENSDORG00000001819	Pus3	80	36.476	Dipodomys_ordii
ENSCSAVG00000002211	-	90	32.775	FBgn0034703	CG3045	81	33.014	Drosophila_melanogaster
ENSCSAVG00000002211	-	92	31.311	ENSETEG00000013067	PUS3	87	31.034	Echinops_telfairi
ENSCSAVG00000002211	-	88	39.091	ENSEBUG00000002154	pus3	59	40.000	Eptatretus_burgeri
ENSCSAVG00000002211	-	94	36.691	ENSEASG00005023003	PUS3	84	36.342	Equus_asinus_asinus
ENSCSAVG00000002211	-	94	36.451	ENSECAG00000007581	PUS3	84	36.105	Equus_caballus
ENSCSAVG00000002211	-	99	37.054	ENSEEUG00000010543	PUS3	89	36.726	Erinaceus_europaeus
ENSCSAVG00000002211	-	98	34.318	ENSELUG00000004425	pus3	88	34.318	Esox_lucius
ENSCSAVG00000002211	-	94	36.792	ENSFCAG00000005340	PUS3	85	36.682	Felis_catus
ENSCSAVG00000002211	-	90	34.901	ENSFALG00000005159	PUS3	81	34.250	Ficedula_albicollis
ENSCSAVG00000002211	-	95	36.131	ENSFDAG00000020745	PUS3	85	35.797	Fukomys_damarensis
ENSCSAVG00000002211	-	90	35.396	ENSFHEG00000010984	pus3	74	35.396	Fundulus_heteroclitus
ENSCSAVG00000002211	-	90	34.826	ENSGMOG00000004534	pus3	86	34.826	Gadus_morhua
ENSCSAVG00000002211	-	99	33.560	ENSGALG00000000962	PUS3	94	33.107	Gallus_gallus
ENSCSAVG00000002211	-	89	35.930	ENSGAFG00000005615	pus3	79	36.139	Gambusia_affinis
ENSCSAVG00000002211	-	89	34.750	ENSGACG00000002125	pus3	81	34.975	Gasterosteus_aculeatus
ENSCSAVG00000002211	-	90	38.750	ENSGAGG00000000160	PUS3	79	38.250	Gopherus_agassizii
ENSCSAVG00000002211	-	95	35.499	ENSGGOG00000015047	PUS3	85	35.035	Gorilla_gorilla
ENSCSAVG00000002211	-	95	35.377	ENSHBUG00000016532	pus3	84	35.142	Haplochromis_burtoni
ENSCSAVG00000002211	-	95	35.664	ENSHGLG00000000565	PUS3	85	35.335	Heterocephalus_glaber_female
ENSCSAVG00000002211	-	78	35.429	ENSHGLG00000006599	-	70	35.143	Heterocephalus_glaber_female
ENSCSAVG00000002211	-	89	30.402	ENSHGLG00000018861	-	80	30.100	Heterocephalus_glaber_female
ENSCSAVG00000002211	-	68	38.944	ENSHGLG00000015753	-	81	39.016	Heterocephalus_glaber_female
ENSCSAVG00000002211	-	64	40.068	ENSHGLG00100008656	-	94	39.865	Heterocephalus_glaber_male
ENSCSAVG00000002211	-	65	38.567	ENSHGLG00100007519	-	65	38.225	Heterocephalus_glaber_male
ENSCSAVG00000002211	-	54	41.224	ENSHGLG00100002435	-	85	40.964	Heterocephalus_glaber_male
ENSCSAVG00000002211	-	92	34.845	ENSHGLG00100014825	-	86	34.752	Heterocephalus_glaber_male
ENSCSAVG00000002211	-	90	35.910	ENSHCOG00000015705	pus3	82	35.661	Hippocampus_comes
ENSCSAVG00000002211	-	99	32.426	ENSIPUG00000000105	pus3	86	32.426	Ictalurus_punctatus
ENSCSAVG00000002211	-	94	36.429	ENSSTOG00000003721	PUS3	85	36.190	Ictidomys_tridecemlineatus
ENSCSAVG00000002211	-	89	36.500	ENSJJAG00000011306	Pus3	85	35.446	Jaculus_jaculus
ENSCSAVG00000002211	-	90	34.165	ENSKMAG00000016715	pus3	78	34.165	Kryptolebias_marmoratus
ENSCSAVG00000002211	-	90	32.000	ENSLBEG00000004143	pus3	82	31.750	Labrus_bergylta
ENSCSAVG00000002211	-	100	33.406	ENSLACG00000011161	PUS3	88	33.333	Latimeria_chalumnae
ENSCSAVG00000002211	-	90	35.644	ENSLOCG00000011922	pus3	82	35.644	Lepisosteus_oculatus
ENSCSAVG00000002211	-	94	35.613	ENSLAFG00000000535	PUS3	85	35.280	Loxodonta_africana
ENSCSAVG00000002211	-	89	36.070	ENSMFAG00000041002	PUS3	80	35.572	Macaca_fascicularis
ENSCSAVG00000002211	-	89	36.070	ENSMMUG00000041875	PUS3	80	35.572	Macaca_mulatta
ENSCSAVG00000002211	-	89	36.070	ENSMNEG00000045347	PUS3	80	35.572	Macaca_nemestrina
ENSCSAVG00000002211	-	95	35.581	ENSMLEG00000029053	PUS3	85	35.116	Mandrillus_leucophaeus
ENSCSAVG00000002211	-	89	35.427	ENSMAMG00000016741	pus3	79	35.149	Mastacembelus_armatus
ENSCSAVG00000002211	-	95	35.377	ENSMZEG00005015950	pus3	84	35.142	Maylandia_zebra
ENSCSAVG00000002211	-	82	36.264	ENSMGAG00000000851	PUS3	93	34.890	Meleagris_gallopavo
ENSCSAVG00000002211	-	94	37.176	ENSMAUG00000015873	Pus3	85	36.830	Mesocricetus_auratus
ENSCSAVG00000002211	-	94	35.952	ENSMICG00000032941	PUS3	85	35.613	Microcebus_murinus
ENSCSAVG00000002211	-	95	36.385	ENSMOCG00000004901	Pus3	85	35.915	Microtus_ochrogaster
ENSCSAVG00000002211	-	92	35.049	ENSMMOG00000013909	pus3	84	34.719	Mola_mola
ENSCSAVG00000002211	-	90	37.101	ENSMODG00000004222	PUS3	87	37.101	Monodelphis_domestica
ENSCSAVG00000002211	-	90	33.666	ENSMALG00000022420	pus3	82	33.416	Monopterus_albus
ENSCSAVG00000002211	-	94	36.321	MGP_CAROLIEiJ_G0031957	Pus3	90	41.781	Mus_caroli
ENSCSAVG00000002211	-	94	35.849	ENSMUSG00000032103	Pus3	90	41.781	Mus_musculus
ENSCSAVG00000002211	-	93	36.429	MGP_PahariEiJ_G0014822	Pus3	90	41.438	Mus_pahari
ENSCSAVG00000002211	-	94	35.849	MGP_SPRETEiJ_G0033081	Pus3	90	41.781	Mus_spretus
ENSCSAVG00000002211	-	94	36.905	ENSMPUG00000006568	PUS3	85	36.557	Mustela_putorius_furo
ENSCSAVG00000002211	-	94	38.061	ENSMLUG00000030636	PUS3	85	37.705	Myotis_lucifugus
ENSCSAVG00000002211	-	94	37.028	ENSNGAG00000013868	Pus3	85	36.682	Nannospalax_galili
ENSCSAVG00000002211	-	95	35.613	ENSNBRG00000015864	pus3	84	35.377	Neolamprologus_brichardi
ENSCSAVG00000002211	-	95	34.813	ENSNLEG00000007460	PUS3	85	34.884	Nomascus_leucogenys
ENSCSAVG00000002211	-	64	42.955	ENSMEUG00000014040	PUS3	58	42.612	Notamacropus_eugenii
ENSCSAVG00000002211	-	94	36.730	ENSOPRG00000007888	-	85	36.385	Ochotona_princeps
ENSCSAVG00000002211	-	95	36.111	ENSODEG00000004280	PUS3	85	35.981	Octodon_degus
ENSCSAVG00000002211	-	91	36.275	ENSONIG00000016224	pus3	90	35.802	Oreochromis_niloticus
ENSCSAVG00000002211	-	93	33.806	ENSOANG00000000406	PUS3	86	33.813	Ornithorhynchus_anatinus
ENSCSAVG00000002211	-	94	35.142	ENSOCUG00000004468	PUS3	80	34.813	Oryctolagus_cuniculus
ENSCSAVG00000002211	-	90	34.491	ENSORLG00000008445	pus3	79	34.491	Oryzias_latipes
ENSCSAVG00000002211	-	90	35.250	ENSORLG00020008847	pus3	79	35.250	Oryzias_latipes_hni
ENSCSAVG00000002211	-	90	34.988	ENSORLG00015007438	pus3	79	34.988	Oryzias_latipes_hsok
ENSCSAVG00000002211	-	91	34.653	ENSOMEG00000014321	pus3	81	34.653	Oryzias_melastigma
ENSCSAVG00000002211	-	94	36.211	ENSOGAG00000008913	PUS3	84	35.867	Otolemur_garnettii
ENSCSAVG00000002211	-	94	36.905	ENSOARG00000011870	PUS3	85	36.557	Ovis_aries
ENSCSAVG00000002211	-	95	34.813	ENSPPAG00000025809	PUS3	85	34.884	Pan_paniscus
ENSCSAVG00000002211	-	94	37.055	ENSPPRG00000005662	PUS3	85	36.941	Panthera_pardus
ENSCSAVG00000002211	-	94	36.557	ENSPTIG00000001192	PUS3	85	36.449	Panthera_tigris_altaica
ENSCSAVG00000002211	-	95	34.579	ENSPTRG00000004449	PUS3	85	34.651	Pan_troglodytes
ENSCSAVG00000002211	-	95	35.581	ENSPANG00000013782	PUS3	85	35.116	Papio_anubis
ENSCSAVG00000002211	-	91	36.634	ENSPKIG00000000646	pus3	81	36.634	Paramormyrops_kingsleyae
ENSCSAVG00000002211	-	99	34.831	ENSPSIG00000013961	PUS3	87	34.382	Pelodiscus_sinensis
ENSCSAVG00000002211	-	93	36.190	ENSPMGG00000000911	pus3	90	36.170	Periophthalmus_magnuspinnatus
ENSCSAVG00000002211	-	94	37.176	ENSPEMG00000009602	Pus3	85	36.706	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002211	-	93	36.879	ENSPCIG00000010225	PUS3	89	36.643	Phascolarctos_cinereus
ENSCSAVG00000002211	-	96	36.385	ENSPFOG00000009447	pus3	91	36.385	Poecilia_formosa
ENSCSAVG00000002211	-	90	36.658	ENSPLAG00000023343	pus3	79	36.658	Poecilia_latipinna
ENSCSAVG00000002211	-	90	36.908	ENSPMEG00000009870	pus3	79	36.908	Poecilia_mexicana
ENSCSAVG00000002211	-	64	43.860	ENSPREG00000003179	pus3	54	43.860	Poecilia_reticulata
ENSCSAVG00000002211	-	95	34.813	ENSPPYG00000004039	PUS3	85	34.346	Pongo_abelii
ENSCSAVG00000002211	-	94	33.967	ENSPCAG00000000441	PUS3	85	33.882	Procavia_capensis
ENSCSAVG00000002211	-	94	36.905	ENSPCOG00000019330	PUS3	85	36.557	Propithecus_coquereli
ENSCSAVG00000002211	-	94	35.613	ENSPVAG00000002606	PUS3	85	35.280	Pteropus_vampyrus
ENSCSAVG00000002211	-	95	35.377	ENSPNYG00000019615	pus3	84	35.142	Pundamilia_nyererei
ENSCSAVG00000002211	-	90	33.499	ENSPNAG00000014541	pus3	77	33.415	Pygocentrus_nattereri
ENSCSAVG00000002211	-	95	36.643	ENSRNOG00000012994	Pus3	85	36.170	Rattus_norvegicus
ENSCSAVG00000002211	-	95	34.579	ENSRBIG00000044456	PUS3	85	34.651	Rhinopithecus_bieti
ENSCSAVG00000002211	-	95	34.579	ENSRROG00000035245	PUS3	85	34.651	Rhinopithecus_roxellana
ENSCSAVG00000002211	-	80	32.877	YFL001W	DEG1	78	32.143	Saccharomyces_cerevisiae
ENSCSAVG00000002211	-	95	34.813	ENSSBOG00000022433	PUS3	85	34.346	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002211	-	94	37.647	ENSSHAG00000001382	PUS3	84	37.383	Sarcophilus_harrisii
ENSCSAVG00000002211	-	92	36.341	ENSSFOG00015004850	pus3	86	35.990	Scleropages_formosus
ENSCSAVG00000002211	-	89	35.250	ENSSMAG00000020340	pus3	78	35.149	Scophthalmus_maximus
ENSCSAVG00000002211	-	89	35.338	ENSSDUG00000020825	pus3	78	35.309	Seriola_dumerili
ENSCSAVG00000002211	-	90	35.556	ENSSLDG00000019932	pus3	78	35.309	Seriola_lalandi_dorsalis
ENSCSAVG00000002211	-	65	43.151	ENSSARG00000013826	PUS3	91	42.568	Sorex_araneus
ENSCSAVG00000002211	-	90	35.589	ENSSPUG00000001412	PUS3	80	35.589	Sphenodon_punctatus
ENSCSAVG00000002211	-	96	35.035	ENSSPAG00000019221	pus3	89	34.988	Stegastes_partitus
ENSCSAVG00000002211	-	94	36.817	ENSSSCG00000015222	PUS3	85	36.580	Sus_scrofa
ENSCSAVG00000002211	-	96	34.921	ENSTGUG00000000778	-	97	34.467	Taeniopygia_guttata
ENSCSAVG00000002211	-	74	38.988	ENSTRUG00000013050	pus3	73	38.393	Takifugu_rubripes
ENSCSAVG00000002211	-	90	34.491	ENSTNIG00000004929	PUS3	81	34.491	Tetraodon_nigroviridis
ENSCSAVG00000002211	-	74	38.554	ENSTNIG00000010307	pus3	79	38.554	Tetraodon_nigroviridis
ENSCSAVG00000002211	-	95	37.825	ENSTBEG00000004382	PUS3	89	37.352	Tupaia_belangeri
ENSCSAVG00000002211	-	94	36.817	ENSTTRG00000012167	PUS3	85	36.706	Tursiops_truncatus
ENSCSAVG00000002211	-	94	36.429	ENSUAMG00000009297	PUS3	85	36.190	Ursus_americanus
ENSCSAVG00000002211	-	94	36.429	ENSUMAG00000001795	PUS3	85	36.085	Ursus_maritimus
ENSCSAVG00000002211	-	95	36.111	ENSVPAG00000001495	PUS3	87	36.009	Vicugna_pacos
ENSCSAVG00000002211	-	94	36.085	ENSVVUG00000020152	PUS3	85	36.085	Vulpes_vulpes
ENSCSAVG00000002211	-	90	32.587	ENSXETG00000024532	pus3	72	32.500	Xenopus_tropicalis
ENSCSAVG00000002211	-	69	41.042	ENSXMAG00000025659	PUS3	51	41.042	Xiphophorus_maculatus
ENSCSAVG00000002211	-	70	40.514	ENSXMAG00000029934	pus3	71	40.514	Xiphophorus_maculatus
ENSCSAVG00000002211	-	70	40.645	ENSXMAG00000025077	pus3	71	40.645	Xiphophorus_maculatus
ENSCSAVG00000002211	-	57	45.276	ENSXMAG00000028945	pus3	84	45.276	Xiphophorus_maculatus
ENSCSAVG00000002211	-	90	35.572	ENSXMAG00000028016	pus3	82	35.572	Xiphophorus_maculatus
ENSCSAVG00000002211	-	57	45.276	ENSXMAG00000025146	pus3	78	45.276	Xiphophorus_maculatus