EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000002297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4870 bases
Position: chrreftig_281:78493-83362
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003891	GTP_EFTU	PF00009.27	3.4e-44	1	1
ENSCSAVP00000003890	GTP_EFTU	PF00009.27	3.9e-44	1	1
ENSCSAVP00000003889	GTP_EFTU	PF00009.27	4.1e-44	1	1
ENSCSAVP00000003892	GTP_EFTU	PF00009.27	9.2e-13	1	1
ENSCSAVP00000003891	GTP_EFTU_D3	PF03143.17	9.5e-28	1	1
ENSCSAVP00000003890	GTP_EFTU_D3	PF03143.17	1e-27	1	1
ENSCSAVP00000003889	GTP_EFTU_D3	PF03143.17	1e-27	1	1
ENSCSAVP00000003892	GTP_EFTU_D3	PF03143.17	5.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003947	-	2704	-	ENSCSAVP00000003889	690 (aa)	-	H2YEZ1
ENSCSAVT00000003948	-	2663	-	ENSCSAVP00000003890	682 (aa)	-	H2YEZ2
ENSCSAVT00000003949	-	1860	-	ENSCSAVP00000003891	619 (aa)	-	H2YEZ3
ENSCSAVT00000003950	-	1404	-	ENSCSAVP00000003892	467 (aa)	-	H2YEZ4

Gene Model

Click here to download ENSCSAVG00000002297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002297	-	68	38.063	ENSCSAVG00000003196	-	94	38.063
ENSCSAVG00000002297	-	70	37.892	ENSCSAVG00000006357	-	89	58.904
ENSCSAVG00000002297	-	69	37.500	ENSCSAVG00000009663	-	94	37.500
ENSCSAVG00000002297	-	69	39.486	ENSCSAVG00000001085	-	87	39.486
ENSCSAVG00000002297	-	69	34.028	ENSCSAVG00000010206	-	88	33.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002297	-	99	60.741	ENSG00000112339	HBS1L	95	59.627	Homo_sapiens
ENSCSAVG00000002297	-	64	77.612	ENSAPOG00000013169	hbs1l	85	62.240	Acanthochromis_polyacanthus
ENSCSAVG00000002297	-	99	60.000	ENSAMEG00000009749	HBS1L	99	48.784	Ailuropoda_melanoleuca
ENSCSAVG00000002297	-	75	60.944	ENSACIG00000017087	hbs1l	81	60.944	Amphilophus_citrinellus
ENSCSAVG00000002297	-	99	60.000	ENSAPEG00000008320	hbs1l	90	59.789	Amphiprion_percula
ENSCSAVG00000002297	-	99	61.481	ENSATEG00000004459	hbs1l	94	60.515	Anabas_testudineus
ENSCSAVG00000002297	-	97	62.222	ENSAPLG00000007791	HBS1L	99	49.199	Anas_platyrhynchos
ENSCSAVG00000002297	-	99	59.031	ENSACAG00000010120	HBS1L	88	59.031	Anolis_carolinensis
ENSCSAVG00000002297	-	99	61.940	ENSANAG00000038076	HBS1L	99	50.845	Aotus_nancymaae
ENSCSAVG00000002297	-	99	61.159	ENSACLG00000010469	hbs1l	96	61.159	Astatotilapia_calliptera
ENSCSAVG00000002297	-	99	59.259	ENSAMXG00000004260	hbs1l	94	59.623	Astyanax_mexicanus
ENSCSAVG00000002297	-	99	59.259	ENSBTAG00000020174	HBS1L	99	48.939	Bos_taurus
ENSCSAVG00000002297	-	78	44.689	WBGene00010622	K07A12.4	99	40.376	Caenorhabditis_elegans
ENSCSAVG00000002297	-	99	61.940	ENSCJAG00000007678	HBS1L	98	50.691	Callithrix_jacchus
ENSCSAVG00000002297	-	99	59.259	ENSCAFG00000000226	HBS1L	99	47.887	Canis_familiaris
ENSCSAVG00000002297	-	99	59.259	ENSCAFG00020021904	HBS1L	99	47.887	Canis_lupus_dingo
ENSCSAVG00000002297	-	99	59.259	ENSCHIG00000010299	HBS1L	99	49.265	Capra_hircus
ENSCSAVG00000002297	-	99	59.259	ENSTSYG00000007089	HBS1L	92	58.442	Carlito_syrichta
ENSCSAVG00000002297	-	96	53.595	ENSCPOG00000007015	HBS1L	99	43.189	Cavia_porcellus
ENSCSAVG00000002297	-	99	61.940	ENSCCAG00000033863	HBS1L	99	50.249	Cebus_capucinus
ENSCSAVG00000002297	-	99	61.940	ENSCATG00000043042	HBS1L	96	57.645	Cercocebus_atys
ENSCSAVG00000002297	-	99	58.174	ENSCLAG00000004937	HBS1L	99	47.673	Chinchilla_lanigera
ENSCSAVG00000002297	-	99	61.940	ENSCSAG00000016791	HBS1L	99	49.351	Chlorocebus_sabaeus
ENSCSAVG00000002297	-	58	53.463	ENSCHOG00000001852	HBS1L	55	53.463	Choloepus_hoffmanni
ENSCSAVG00000002297	-	99	59.259	ENSCPBG00000017635	HBS1L	99	48.527	Chrysemys_picta_bellii
ENSCSAVG00000002297	-	100	88.321	ENSCING00000005592	-	92	85.065	Ciona_intestinalis
ENSCSAVG00000002297	-	99	62.687	ENSCANG00000031208	HBS1L	89	62.471	Colobus_angolensis_palliatus
ENSCSAVG00000002297	-	99	61.481	ENSCGRG00001024531	Hbs1l	99	49.145	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002297	-	99	61.481	ENSCGRG00000017361	Hbs1l	99	49.145	Cricetulus_griseus_crigri
ENSCSAVG00000002297	-	99	61.159	ENSCSEG00000002794	hbs1l	89	61.159	Cynoglossus_semilaevis
ENSCSAVG00000002297	-	99	62.555	ENSCVAG00000001462	hbs1l	89	62.555	Cyprinodon_variegatus
ENSCSAVG00000002297	-	99	60.000	ENSDARG00000036778	hbs1l	98	58.592	Danio_rerio
ENSCSAVG00000002297	-	99	60.741	ENSDORG00000005958	Hbs1l	89	58.873	Dipodomys_ordii
ENSCSAVG00000002297	-	99	51.111	FBgn0042712	HBS1	99	45.401	Drosophila_melanogaster
ENSCSAVG00000002297	-	99	59.259	ENSETEG00000000913	HBS1L	99	44.808	Echinops_telfairi
ENSCSAVG00000002297	-	99	54.074	ENSEBUG00000010759	hbs1l	99	49.178	Eptatretus_burgeri
ENSCSAVG00000002297	-	99	59.259	ENSEASG00005011148	HBS1L	99	47.599	Equus_asinus_asinus
ENSCSAVG00000002297	-	99	59.259	ENSECAG00000004470	HBS1L	99	48.837	Equus_caballus
ENSCSAVG00000002297	-	99	59.259	ENSEEUG00000013582	HBS1L	99	46.020	Erinaceus_europaeus
ENSCSAVG00000002297	-	94	46.434	ENSELUG00000006444	hbs1l	98	47.421	Esox_lucius
ENSCSAVG00000002297	-	99	60.741	ENSFCAG00000001810	HBS1L	92	57.708	Felis_catus
ENSCSAVG00000002297	-	77	60.741	ENSFALG00000011898	HBS1L	99	50.814	Ficedula_albicollis
ENSCSAVG00000002297	-	99	60.000	ENSFDAG00000011841	HBS1L	99	47.525	Fukomys_damarensis
ENSCSAVG00000002297	-	99	61.237	ENSFHEG00000006942	hbs1l	97	61.237	Fundulus_heteroclitus
ENSCSAVG00000002297	-	99	60.741	ENSGMOG00000011843	hbs1l	99	49.133	Gadus_morhua
ENSCSAVG00000002297	-	99	60.741	ENSGALG00000013962	HBS1L	86	62.243	Gallus_gallus
ENSCSAVG00000002297	-	99	62.232	ENSGAFG00000004157	hbs1l	94	62.232	Gambusia_affinis
ENSCSAVG00000002297	-	99	60.000	ENSGACG00000011035	hbs1l	99	49.020	Gasterosteus_aculeatus
ENSCSAVG00000002297	-	99	59.259	ENSGAGG00000002033	HBS1L	99	48.359	Gopherus_agassizii
ENSCSAVG00000002297	-	99	46.353	ENSGGOG00000034956	-	93	53.191	Gorilla_gorilla
ENSCSAVG00000002297	-	99	61.159	ENSHBUG00000013424	hbs1l	96	61.159	Haplochromis_burtoni
ENSCSAVG00000002297	-	99	59.259	ENSHGLG00000000516	HBS1L	88	58.599	Heterocephalus_glaber_female
ENSCSAVG00000002297	-	99	59.259	ENSHGLG00100003550	HBS1L	88	58.599	Heterocephalus_glaber_male
ENSCSAVG00000002297	-	99	57.037	ENSHCOG00000007581	hbs1l	89	56.818	Hippocampus_comes
ENSCSAVG00000002297	-	99	59.442	ENSIPUG00000010748	hbs1l	92	59.442	Ictalurus_punctatus
ENSCSAVG00000002297	-	99	60.741	ENSSTOG00000007551	HBS1L	99	48.926	Ictidomys_tridecemlineatus
ENSCSAVG00000002297	-	99	60.294	ENSJJAG00000017024	-	97	47.983	Jaculus_jaculus
ENSCSAVG00000002297	-	99	48.889	ENSJJAG00000012660	-	99	38.849	Jaculus_jaculus
ENSCSAVG00000002297	-	99	62.963	ENSKMAG00000012130	hbs1l	97	60.331	Kryptolebias_marmoratus
ENSCSAVG00000002297	-	99	60.000	ENSLBEG00000002784	hbs1l	96	59.184	Labrus_bergylta
ENSCSAVG00000002297	-	65	59.057	ENSLACG00000004528	HBS1L	82	59.057	Latimeria_chalumnae
ENSCSAVG00000002297	-	99	59.259	ENSLOCG00000016221	hbs1l	99	48.153	Lepisosteus_oculatus
ENSCSAVG00000002297	-	99	60.000	ENSLAFG00000007835	HBS1L	100	48.127	Loxodonta_africana
ENSCSAVG00000002297	-	99	61.481	ENSMFAG00000003766	HBS1L	99	51.270	Macaca_fascicularis
ENSCSAVG00000002297	-	99	61.481	ENSMMUG00000004802	HBS1L	99	51.587	Macaca_mulatta
ENSCSAVG00000002297	-	99	61.481	ENSMNEG00000043942	HBS1L	99	51.270	Macaca_nemestrina
ENSCSAVG00000002297	-	99	61.940	ENSMLEG00000043218	HBS1L	97	51.669	Mandrillus_leucophaeus
ENSCSAVG00000002297	-	99	62.222	ENSMAMG00000016498	hbs1l	95	59.221	Mastacembelus_armatus
ENSCSAVG00000002297	-	99	61.159	ENSMZEG00005015575	hbs1l	96	61.159	Maylandia_zebra
ENSCSAVG00000002297	-	75	61.159	ENSMZEG00005024018	-	80	61.159	Maylandia_zebra
ENSCSAVG00000002297	-	97	60.741	ENSMGAG00000013065	HBS1L	97	48.854	Meleagris_gallopavo
ENSCSAVG00000002297	-	100	60.584	ENSMAUG00000001077	Hbs1l	99	49.284	Mesocricetus_auratus
ENSCSAVG00000002297	-	99	60.294	ENSMICG00000001533	-	100	47.273	Microcebus_murinus
ENSCSAVG00000002297	-	99	58.519	ENSMICG00000030043	-	95	51.613	Microcebus_murinus
ENSCSAVG00000002297	-	99	60.000	ENSMOCG00000023038	Hbs1l	99	48.933	Microtus_ochrogaster
ENSCSAVG00000002297	-	95	61.194	ENSMMOG00000015507	hbs1l	97	58.607	Mola_mola
ENSCSAVG00000002297	-	99	60.741	ENSMODG00000017499	HBS1L	99	49.432	Monodelphis_domestica
ENSCSAVG00000002297	-	99	60.741	ENSMALG00000010768	hbs1l	93	58.932	Monopterus_albus
ENSCSAVG00000002297	-	99	61.481	MGP_CAROLIEiJ_G0015162	Hbs1l	99	50.642	Mus_caroli
ENSCSAVG00000002297	-	99	61.481	ENSMUSG00000019977	Hbs1l	81	70.992	Mus_musculus
ENSCSAVG00000002297	-	99	60.000	MGP_PahariEiJ_G0023782	Hbs1l	99	49.857	Mus_pahari
ENSCSAVG00000002297	-	99	61.481	MGP_SPRETEiJ_G0015970	Hbs1l	88	60.879	Mus_spretus
ENSCSAVG00000002297	-	99	60.000	ENSMPUG00000014810	HBS1L	99	49.070	Mustela_putorius_furo
ENSCSAVG00000002297	-	99	59.259	ENSMLUG00000010618	HBS1L	99	48.629	Myotis_lucifugus
ENSCSAVG00000002297	-	99	62.222	ENSNGAG00000015184	Hbs1l	99	48.406	Nannospalax_galili
ENSCSAVG00000002297	-	99	60.741	ENSNBRG00000020095	hbs1l	96	61.159	Neolamprologus_brichardi
ENSCSAVG00000002297	-	100	59.854	ENSNLEG00000014721	HBS1L	99	50.863	Nomascus_leucogenys
ENSCSAVG00000002297	-	89	60.000	ENSMEUG00000003907	HBS1L	81	52.764	Notamacropus_eugenii
ENSCSAVG00000002297	-	71	60.169	ENSOPRG00000013595	HBS1L	55	60.169	Ochotona_princeps
ENSCSAVG00000002297	-	99	58.723	ENSODEG00000008959	HBS1L	99	48.154	Octodon_degus
ENSCSAVG00000002297	-	99	60.741	ENSONIG00000000460	hbs1l	92	60.730	Oreochromis_niloticus
ENSCSAVG00000002297	-	99	60.000	ENSOANG00000002684	-	99	49.150	Ornithorhynchus_anatinus
ENSCSAVG00000002297	-	100	58.542	ENSOCUG00000011619	HBS1L	94	61.972	Oryctolagus_cuniculus
ENSCSAVG00000002297	-	99	59.343	ENSORLG00000016559	hbs1l	99	47.887	Oryzias_latipes
ENSCSAVG00000002297	-	99	59.138	ENSORLG00020003827	hbs1l	99	47.245	Oryzias_latipes_hni
ENSCSAVG00000002297	-	99	58.522	ENSORLG00015023105	hbs1l	99	47.746	Oryzias_latipes_hsok
ENSCSAVG00000002297	-	99	60.000	ENSOMEG00000016715	hbs1l	88	59.343	Oryzias_melastigma
ENSCSAVG00000002297	-	99	60.741	ENSOGAG00000012604	HBS1L	99	48.563	Otolemur_garnettii
ENSCSAVG00000002297	-	99	59.259	ENSOARG00000005671	-	99	48.373	Ovis_aries
ENSCSAVG00000002297	-	99	59.259	ENSOARG00000014798	-	99	48.656	Ovis_aries
ENSCSAVG00000002297	-	99	61.194	ENSPPAG00000029900	HBS1L	99	49.307	Pan_paniscus
ENSCSAVG00000002297	-	99	60.741	ENSPPRG00000005285	HBS1L	99	50.702	Panthera_pardus
ENSCSAVG00000002297	-	99	60.741	ENSPTIG00000015803	HBS1L	93	57.576	Panthera_tigris_altaica
ENSCSAVG00000002297	-	99	61.194	ENSPTRG00000018630	HBS1L	99	49.284	Pan_troglodytes
ENSCSAVG00000002297	-	99	61.940	ENSPANG00000007075	HBS1L	97	51.510	Papio_anubis
ENSCSAVG00000002297	-	99	60.000	ENSPKIG00000023171	hbs1l	93	58.568	Paramormyrops_kingsleyae
ENSCSAVG00000002297	-	80	53.571	ENSPSIG00000016467	HBS1L	96	47.231	Pelodiscus_sinensis
ENSCSAVG00000002297	-	99	60.448	ENSPMGG00000018051	hbs1l	100	49.405	Periophthalmus_magnuspinnatus
ENSCSAVG00000002297	-	99	60.741	ENSPEMG00000014369	Hbs1l	99	49.430	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002297	-	99	60.741	ENSPMAG00000002516	hbs1l	99	48.876	Petromyzon_marinus
ENSCSAVG00000002297	-	99	60.619	ENSPFOG00000021764	hbs1l	97	60.619	Poecilia_formosa
ENSCSAVG00000002297	-	99	60.412	ENSPLAG00000006193	hbs1l	97	60.412	Poecilia_latipinna
ENSCSAVG00000002297	-	99	60.825	ENSPMEG00000000925	hbs1l	97	60.825	Poecilia_mexicana
ENSCSAVG00000002297	-	99	60.000	ENSPREG00000011270	hbs1l	97	60.000	Poecilia_reticulata
ENSCSAVG00000002297	-	99	60.741	ENSPPYG00000017027	HBS1L	99	49.211	Pongo_abelii
ENSCSAVG00000002297	-	78	57.054	ENSPCAG00000007002	HBS1L	70	57.054	Procavia_capensis
ENSCSAVG00000002297	-	76	56.780	ENSPVAG00000015229	HBS1L	70	56.780	Pteropus_vampyrus
ENSCSAVG00000002297	-	99	60.944	ENSPNYG00000013360	hbs1l	96	60.944	Pundamilia_nyererei
ENSCSAVG00000002297	-	99	60.044	ENSPNAG00000026721	hbs1l	90	60.044	Pygocentrus_nattereri
ENSCSAVG00000002297	-	99	60.741	ENSRNOG00000014531	Hbs1l	91	60.573	Rattus_norvegicus
ENSCSAVG00000002297	-	99	61.481	ENSRBIG00000004484	HBS1L	99	49.135	Rhinopithecus_bieti
ENSCSAVG00000002297	-	99	61.940	ENSRROG00000026176	HBS1L	97	51.192	Rhinopithecus_roxellana
ENSCSAVG00000002297	-	69	35.347	YKR084C	-	73	35.347	Saccharomyces_cerevisiae
ENSCSAVG00000002297	-	99	62.911	ENSSBOG00000019696	-	87	62.911	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002297	-	99	55.556	ENSSBOG00000016930	-	96	49.730	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002297	-	100	60.584	ENSSHAG00000013509	HBS1L	99	48.870	Sarcophilus_harrisii
ENSCSAVG00000002297	-	99	59.170	ENSSFOG00015017544	hbs1l	96	48.011	Scleropages_formosus
ENSCSAVG00000002297	-	99	62.222	ENSSMAG00000010621	hbs1l	97	60.515	Scophthalmus_maximus
ENSCSAVG00000002297	-	99	60.000	ENSSDUG00000012974	hbs1l	92	59.381	Seriola_dumerili
ENSCSAVG00000002297	-	99	60.000	ENSSLDG00000004960	hbs1l	92	59.381	Seriola_lalandi_dorsalis
ENSCSAVG00000002297	-	97	58.519	ENSSARG00000006747	HBS1L	99	48.748	Sorex_araneus
ENSCSAVG00000002297	-	99	57.778	ENSSPUG00000012389	HBS1L	90	56.846	Sphenodon_punctatus
ENSCSAVG00000002297	-	97	56.290	ENSSSCG00000004169	HBS1L	100	47.312	Sus_scrofa
ENSCSAVG00000002297	-	99	60.741	ENSTGUG00000011507	HBS1L	99	48.459	Taeniopygia_guttata
ENSCSAVG00000002297	-	99	60.300	ENSTRUG00000016128	hbs1l	87	60.300	Takifugu_rubripes
ENSCSAVG00000002297	-	99	60.741	ENSTNIG00000016320	hbs1l	90	59.454	Tetraodon_nigroviridis
ENSCSAVG00000002297	-	87	58.974	ENSTBEG00000009950	HBS1L	99	44.492	Tupaia_belangeri
ENSCSAVG00000002297	-	99	57.778	ENSTTRG00000003715	HBS1L	99	48.069	Tursiops_truncatus
ENSCSAVG00000002297	-	99	60.000	ENSUAMG00000001064	HBS1L	99	49.070	Ursus_americanus
ENSCSAVG00000002297	-	99	60.000	ENSUMAG00000024395	HBS1L	99	50.081	Ursus_maritimus
ENSCSAVG00000002297	-	75	59.740	ENSVPAG00000006280	HBS1L	80	56.818	Vicugna_pacos
ENSCSAVG00000002297	-	99	59.259	ENSVVUG00000000295	HBS1L	99	48.028	Vulpes_vulpes
ENSCSAVG00000002297	-	99	58.407	ENSXETG00000003726	hbs1l	99	47.869	Xenopus_tropicalis
ENSCSAVG00000002297	-	99	60.741	ENSXCOG00000005323	hbs1l	99	49.782	Xiphophorus_couchianus
ENSCSAVG00000002297	-	99	60.825	ENSXMAG00000004359	hbs1l	97	60.825	Xiphophorus_maculatus