EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002309 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 16380 bases
Position: chrreftig_106:30768-47147
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003904	CMS1	PF14617.6	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003962	-	564	-	ENSCSAVP00000003904	127 (aa)	-	H2YF06

Gene Model

Click here to download ENSCSAVG00000002309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002309	-	99	41.270	ENSG00000184220	CMSS1	51	40.517	Homo_sapiens
ENSCSAVG00000002309	-	99	44.444	ENSAPOG00000010604	cmss1	51	44.444	Acanthochromis_polyacanthus
ENSCSAVG00000002309	-	99	46.032	ENSACIG00000021854	cmss1	51	46.032	Amphilophus_citrinellus
ENSCSAVG00000002309	-	99	39.683	ENSAPLG00000010542	CMSS1	54	39.683	Anas_platyrhynchos
ENSCSAVG00000002309	-	99	36.220	ENSCAPG00000013584	CMSS1	58	36.220	Cavia_aperea
ENSCSAVG00000002309	-	99	40.476	ENSCLAG00000011241	CMSS1	54	40.476	Chinchilla_lanigera
ENSCSAVG00000002309	-	99	42.063	ENSCSAG00000006024	CMSS1	51	42.063	Chlorocebus_sabaeus
ENSCSAVG00000002309	-	100	84.252	ENSCING00000014848	-	68	84.252	Ciona_intestinalis
ENSCSAVG00000002309	-	98	36.800	ENSEBUG00000002156	-	91	36.800	Eptatretus_burgeri
ENSCSAVG00000002309	-	99	38.095	ENSEASG00005010966	CMSS1	57	38.095	Equus_asinus_asinus
ENSCSAVG00000002309	-	99	39.683	ENSECAG00000015662	CMSS1	55	39.683	Equus_caballus
ENSCSAVG00000002309	-	99	39.683	ENSFALG00000005816	CMSS1	53	39.683	Ficedula_albicollis
ENSCSAVG00000002309	-	99	42.063	ENSFDAG00000012577	CMSS1	55	42.063	Fukomys_damarensis
ENSCSAVG00000002309	-	99	44.444	ENSFHEG00000012008	cmss1	51	44.444	Fundulus_heteroclitus
ENSCSAVG00000002309	-	99	38.889	ENSHGLG00000019481	CMSS1	51	38.889	Heterocephalus_glaber_female
ENSCSAVG00000002309	-	99	38.889	ENSHGLG00100010314	CMSS1	50	38.889	Heterocephalus_glaber_male
ENSCSAVG00000002309	-	99	40.476	ENSJJAG00000014894	Cmss1	56	40.476	Jaculus_jaculus
ENSCSAVG00000002309	-	99	46.032	ENSKMAG00000002390	cmss1	54	46.032	Kryptolebias_marmoratus
ENSCSAVG00000002309	-	99	46.825	ENSLBEG00000006298	cmss1	52	46.825	Labrus_bergylta
ENSCSAVG00000002309	-	98	42.742	ENSLACG00000009293	CMSS1	53	42.742	Latimeria_chalumnae
ENSCSAVG00000002309	-	99	42.857	ENSLAFG00000017509	CMSS1	55	42.857	Loxodonta_africana
ENSCSAVG00000002309	-	98	41.129	ENSMMUG00000002939	CMSS1	50	40.351	Macaca_mulatta
ENSCSAVG00000002309	-	99	40.476	ENSMGAG00000014360	CMSS1	55	40.476	Meleagris_gallopavo
ENSCSAVG00000002309	-	99	43.651	ENSMMOG00000019794	cmss1	51	43.651	Mola_mola
ENSCSAVG00000002309	-	98	32.258	ENSMEUG00000014505	CMSS1	54	32.258	Notamacropus_eugenii
ENSCSAVG00000002309	-	99	45.238	ENSOANG00000007529	CMSS1	54	45.238	Ornithorhynchus_anatinus
ENSCSAVG00000002309	-	99	37.209	ENSORLG00020012235	cmss1	51	37.209	Oryzias_latipes_hni
ENSCSAVG00000002309	-	99	39.683	ENSOGAG00000002045	CMSS1	55	39.683	Otolemur_garnettii
ENSCSAVG00000002309	-	99	41.270	ENSPTRG00000015157	CMSS1	51	41.270	Pan_troglodytes
ENSCSAVG00000002309	-	99	42.063	ENSPANG00000019980	CMSS1	50	42.063	Papio_anubis
ENSCSAVG00000002309	-	99	44.444	ENSPSIG00000003849	CMSS1	55	44.444	Pelodiscus_sinensis
ENSCSAVG00000002309	-	99	44.882	ENSPMGG00000010286	cmss1	54	44.882	Periophthalmus_magnuspinnatus
ENSCSAVG00000002309	-	98	42.400	ENSPMAG00000001146	cmss1	61	42.400	Petromyzon_marinus
ENSCSAVG00000002309	-	99	42.857	ENSRROG00000042910	CMSS1	52	42.857	Rhinopithecus_roxellana
ENSCSAVG00000002309	-	99	43.651	ENSSPUG00000003865	CMSS1	55	43.651	Sphenodon_punctatus
ENSCSAVG00000002309	-	99	39.683	ENSTGUG00000013635	CMSS1	55	39.683	Taeniopygia_guttata
ENSCSAVG00000002309	-	99	40.476	ENSUAMG00000024209	CMSS1	56	40.476	Ursus_americanus
ENSCSAVG00000002309	-	99	40.476	ENSVVUG00000021647	-	51	40.476	Vulpes_vulpes