EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002332 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4679 bases
Position: chrreftig_5:2234581-2239259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000003937	SHQ1	PF04925.15	5.4e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000003996	-	1287	-	ENSCSAVP00000003937	424 (aa)	-	H2YF39

Gene Model

Click here to download ENSCSAVG00000002332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002332	-	88	43.577	ENSG00000144736	SHQ1	96	50.000	Homo_sapiens
ENSCSAVG00000002332	-	98	40.741	ENSAPOG00000000397	shq1	66	40.244	Acanthochromis_polyacanthus
ENSCSAVG00000002332	-	88	42.611	ENSAMEG00000015140	SHQ1	69	43.860	Ailuropoda_melanoleuca
ENSCSAVG00000002332	-	99	39.443	ENSACIG00000021249	shq1	64	40.409	Amphilophus_citrinellus
ENSCSAVG00000002332	-	98	40.972	ENSAOCG00000023311	shq1	66	40.488	Amphiprion_ocellaris
ENSCSAVG00000002332	-	98	40.972	ENSAPEG00000021686	shq1	67	40.488	Amphiprion_percula
ENSCSAVG00000002332	-	99	39.679	ENSATEG00000008475	shq1	64	39.594	Anabas_testudineus
ENSCSAVG00000002332	-	94	39.430	ENSAPLG00000013926	SHQ1	78	40.452	Anas_platyrhynchos
ENSCSAVG00000002332	-	96	40.185	ENSACAG00000014809	SHQ1	59	40.695	Anolis_carolinensis
ENSCSAVG00000002332	-	85	33.514	ENSANAG00000030500	-	65	33.514	Aotus_nancymaae
ENSCSAVG00000002332	-	88	42.821	ENSANAG00000029241	SHQ1	69	42.821	Aotus_nancymaae
ENSCSAVG00000002332	-	99	39.540	ENSACLG00000023077	shq1	66	37.292	Astatotilapia_calliptera
ENSCSAVG00000002332	-	97	34.426	ENSAMXG00000043822	shq1	65	36.533	Astyanax_mexicanus
ENSCSAVG00000002332	-	88	42.211	ENSBTAG00000005436	SHQ1	68	42.714	Bos_taurus
ENSCSAVG00000002332	-	97	32.243	WBGene00021655	Y48A5A.1	90	33.586	Caenorhabditis_elegans
ENSCSAVG00000002332	-	88	42.317	ENSCJAG00000015131	SHQ1	68	42.317	Callithrix_jacchus
ENSCSAVG00000002332	-	88	42.118	ENSCAFG00000006434	SHQ1	68	42.714	Canis_familiaris
ENSCSAVG00000002332	-	88	42.118	ENSCAFG00020016743	SHQ1	68	42.714	Canis_lupus_dingo
ENSCSAVG00000002332	-	88	42.714	ENSCHIG00000012271	SHQ1	62	42.714	Capra_hircus
ENSCSAVG00000002332	-	88	40.447	ENSTSYG00000014439	SHQ1	69	41.919	Carlito_syrichta
ENSCSAVG00000002332	-	88	38.684	ENSCAPG00000009343	SHQ1	52	62.791	Cavia_aperea
ENSCSAVG00000002332	-	99	41.986	ENSCPOG00000011443	SHQ1	68	42.857	Cavia_porcellus
ENSCSAVG00000002332	-	88	38.035	ENSCCAG00000027080	SHQ1	66	38.035	Cebus_capucinus
ENSCSAVG00000002332	-	90	35.696	ENSCCAG00000036087	-	68	35.806	Cebus_capucinus
ENSCSAVG00000002332	-	88	43.325	ENSCATG00000041238	SHQ1	68	43.325	Cercocebus_atys
ENSCSAVG00000002332	-	99	42.035	ENSCLAG00000004206	SHQ1	69	44.110	Chinchilla_lanigera
ENSCSAVG00000002332	-	67	42.532	ENSCSAG00000011514	SHQ1	63	42.532	Chlorocebus_sabaeus
ENSCSAVG00000002332	-	76	36.994	ENSCHOG00000003273	-	100	36.994	Choloepus_hoffmanni
ENSCSAVG00000002332	-	98	39.683	ENSCPBG00000006441	SHQ1	67	39.141	Chrysemys_picta_bellii
ENSCSAVG00000002332	-	100	65.967	ENSCING00000008013	-	97	65.967	Ciona_intestinalis
ENSCSAVG00000002332	-	88	43.890	ENSCANG00000039295	SHQ1	69	43.890	Colobus_angolensis_palliatus
ENSCSAVG00000002332	-	99	41.928	ENSCGRG00001012583	Shq1	63	60.465	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002332	-	99	41.928	ENSCGRG00000009849	Shq1	63	60.465	Cricetulus_griseus_crigri
ENSCSAVG00000002332	-	94	39.614	ENSCSEG00000007829	shq1	63	39.949	Cynoglossus_semilaevis
ENSCSAVG00000002332	-	98	39.401	ENSCVAG00000020049	shq1	67	40.153	Cyprinodon_variegatus
ENSCSAVG00000002332	-	99	39.907	ENSDARG00000058522	shq1	66	40.513	Danio_rerio
ENSCSAVG00000002332	-	93	41.784	ENSDNOG00000033937	SHQ1	69	43.860	Dasypus_novemcinctus
ENSCSAVG00000002332	-	88	36.725	ENSETEG00000005766	SHQ1	69	36.725	Echinops_telfairi
ENSCSAVG00000002332	-	77	36.994	ENSEBUG00000005445	shq1	68	38.487	Eptatretus_burgeri
ENSCSAVG00000002332	-	98	41.964	ENSEASG00005002237	SHQ1	69	42.965	Equus_asinus_asinus
ENSCSAVG00000002332	-	98	41.741	ENSECAG00000015673	SHQ1	67	42.714	Equus_caballus
ENSCSAVG00000002332	-	88	41.626	ENSEEUG00000010568	SHQ1	69	42.607	Erinaceus_europaeus
ENSCSAVG00000002332	-	88	40.360	ENSELUG00000003476	shq1	81	37.760	Esox_lucius
ENSCSAVG00000002332	-	88	42.965	ENSFCAG00000012781	SHQ1	69	42.965	Felis_catus
ENSCSAVG00000002332	-	88	40.816	ENSFALG00000013428	SHQ1	64	40.816	Ficedula_albicollis
ENSCSAVG00000002332	-	93	41.966	ENSFDAG00000005595	SHQ1	64	41.928	Fukomys_damarensis
ENSCSAVG00000002332	-	98	40.000	ENSFHEG00000017552	shq1	67	40.000	Fundulus_heteroclitus
ENSCSAVG00000002332	-	88	40.513	ENSGMOG00000007350	shq1	100	40.513	Gadus_morhua
ENSCSAVG00000002332	-	98	41.309	ENSGALG00000007798	SHQ1	71	40.798	Gallus_gallus
ENSCSAVG00000002332	-	91	40.253	ENSGACG00000011797	shq1	100	41.645	Gasterosteus_aculeatus
ENSCSAVG00000002332	-	88	43.577	ENSGGOG00000034818	SHQ1	68	43.577	Gorilla_gorilla
ENSCSAVG00000002332	-	99	39.540	ENSHBUG00000010857	shq1	65	40.051	Haplochromis_burtoni
ENSCSAVG00000002332	-	98	43.182	ENSHGLG00000003637	SHQ1	66	43.311	Heterocephalus_glaber_female
ENSCSAVG00000002332	-	98	43.182	ENSHGLG00100011957	SHQ1	68	43.311	Heterocephalus_glaber_male
ENSCSAVG00000002332	-	98	38.679	ENSHCOG00000010799	shq1	69	38.462	Hippocampus_comes
ENSCSAVG00000002332	-	99	36.712	ENSIPUG00000001247	shq1	67	37.852	Ictalurus_punctatus
ENSCSAVG00000002332	-	88	42.532	ENSSTOG00000010043	SHQ1	72	42.356	Ictidomys_tridecemlineatus
ENSCSAVG00000002332	-	70	62.791	ENSJJAG00000017611	Shq1	62	62.791	Jaculus_jaculus
ENSCSAVG00000002332	-	98	40.416	ENSKMAG00000004457	shq1	66	41.327	Kryptolebias_marmoratus
ENSCSAVG00000002332	-	98	40.682	ENSLACG00000014243	SHQ1	62	40.767	Latimeria_chalumnae
ENSCSAVG00000002332	-	99	40.766	ENSLOCG00000009970	shq1	69	41.604	Lepisosteus_oculatus
ENSCSAVG00000002332	-	75	36.086	ENSMFAG00000037396	-	60	36.086	Macaca_fascicularis
ENSCSAVG00000002332	-	88	43.577	ENSMFAG00000039148	SHQ1	68	43.577	Macaca_fascicularis
ENSCSAVG00000002332	-	75	36.086	ENSMMUG00000021761	-	60	36.086	Macaca_mulatta
ENSCSAVG00000002332	-	77	42.407	ENSMMUG00000009571	SHQ1	63	42.407	Macaca_mulatta
ENSCSAVG00000002332	-	88	43.577	ENSMNEG00000032667	SHQ1	68	43.577	Macaca_nemestrina
ENSCSAVG00000002332	-	88	43.577	ENSMLEG00000038493	SHQ1	68	43.577	Mandrillus_leucophaeus
ENSCSAVG00000002332	-	98	40.185	ENSMAMG00000023432	shq1	61	40.051	Mastacembelus_armatus
ENSCSAVG00000002332	-	99	39.540	ENSMZEG00005008649	shq1	65	40.051	Maylandia_zebra
ENSCSAVG00000002332	-	98	41.686	ENSMGAG00000009640	SHQ1	72	41.163	Meleagris_gallopavo
ENSCSAVG00000002332	-	98	41.950	ENSMAUG00000022030	Shq1	63	62.791	Mesocricetus_auratus
ENSCSAVG00000002332	-	98	42.857	ENSMICG00000009224	SHQ1	68	43.860	Microcebus_murinus
ENSCSAVG00000002332	-	98	41.136	ENSMOCG00000017836	Shq1	63	62.791	Microtus_ochrogaster
ENSCSAVG00000002332	-	99	37.355	ENSMMOG00000010569	shq1	66	38.342	Mola_mola
ENSCSAVG00000002332	-	99	40.535	ENSMODG00000003926	SHQ1	71	40.943	Monodelphis_domestica
ENSCSAVG00000002332	-	98	40.230	ENSMALG00000008870	shq1	65	39.796	Monopterus_albus
ENSCSAVG00000002332	-	98	40.455	MGP_CAROLIEiJ_G0028689	Shq1	62	62.791	Mus_caroli
ENSCSAVG00000002332	-	98	40.682	ENSMUSG00000035378	Shq1	62	60.465	Mus_musculus
ENSCSAVG00000002332	-	98	40.179	MGP_PahariEiJ_G0022440	Shq1	62	62.791	Mus_pahari
ENSCSAVG00000002332	-	98	40.682	MGP_SPRETEiJ_G0029717	Shq1	62	60.465	Mus_spretus
ENSCSAVG00000002332	-	98	41.295	ENSMPUG00000017006	SHQ1	67	42.462	Mustela_putorius_furo
ENSCSAVG00000002332	-	87	39.702	ENSMLUG00000013539	SHQ1	66	41.643	Myotis_lucifugus
ENSCSAVG00000002332	-	93	36.816	ENSNGAG00000023317	Shq1	71	37.500	Nannospalax_galili
ENSCSAVG00000002332	-	65	42.254	ENSNBRG00000024004	shq1	59	38.944	Neolamprologus_brichardi
ENSCSAVG00000002332	-	88	43.577	ENSNLEG00000002731	SHQ1	68	43.577	Nomascus_leucogenys
ENSCSAVG00000002332	-	87	33.813	ENSMEUG00000009350	-	71	33.813	Notamacropus_eugenii
ENSCSAVG00000002332	-	59	50.000	ENSOPRG00000013963	-	73	50.000	Ochotona_princeps
ENSCSAVG00000002332	-	99	41.535	ENSODEG00000009192	SHQ1	66	67.442	Octodon_degus
ENSCSAVG00000002332	-	99	40.000	ENSONIG00000020264	shq1	65	40.561	Oreochromis_niloticus
ENSCSAVG00000002332	-	88	42.118	ENSOCUG00000016695	SHQ1	68	43.500	Oryctolagus_cuniculus
ENSCSAVG00000002332	-	97	39.720	ENSORLG00000023538	shq1	71	40.256	Oryzias_latipes
ENSCSAVG00000002332	-	97	40.093	ENSORLG00020003697	shq1	78	40.138	Oryzias_latipes_hni
ENSCSAVG00000002332	-	97	39.860	ENSORLG00015021040	shq1	71	40.153	Oryzias_latipes_hsok
ENSCSAVG00000002332	-	97	39.767	ENSOMEG00000001225	shq1	78	40.000	Oryzias_melastigma
ENSCSAVG00000002332	-	88	42.394	ENSOGAG00000003898	SHQ1	70	43.035	Otolemur_garnettii
ENSCSAVG00000002332	-	99	41.020	ENSOARG00000009547	SHQ1	69	41.935	Ovis_aries
ENSCSAVG00000002332	-	88	43.577	ENSPPAG00000027714	SHQ1	68	43.577	Pan_paniscus
ENSCSAVG00000002332	-	66	38.112	ENSPPAG00000043263	-	54	38.112	Pan_paniscus
ENSCSAVG00000002332	-	88	42.965	ENSPPRG00000004769	SHQ1	69	42.965	Panthera_pardus
ENSCSAVG00000002332	-	88	41.221	ENSPTIG00000011478	SHQ1	68	41.221	Panthera_tigris_altaica
ENSCSAVG00000002332	-	88	43.577	ENSPTRG00000015106	SHQ1	68	43.577	Pan_troglodytes
ENSCSAVG00000002332	-	66	38.571	ENSPTRG00000048303	-	53	38.571	Pan_troglodytes
ENSCSAVG00000002332	-	88	42.822	ENSPANG00000002881	SHQ1	68	44.110	Papio_anubis
ENSCSAVG00000002332	-	96	38.771	ENSPKIG00000021517	shq1	69	39.846	Paramormyrops_kingsleyae
ENSCSAVG00000002332	-	98	40.590	ENSPSIG00000005536	SHQ1	68	40.095	Pelodiscus_sinensis
ENSCSAVG00000002332	-	98	39.443	ENSPMGG00000008838	shq1	66	39.231	Periophthalmus_magnuspinnatus
ENSCSAVG00000002332	-	70	62.791	ENSPEMG00000000251	Shq1	62	62.791	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002332	-	98	38.991	ENSPMAG00000005372	shq1	93	39.709	Petromyzon_marinus
ENSCSAVG00000002332	-	98	39.401	ENSPFOG00000003118	shq1	72	40.355	Poecilia_formosa
ENSCSAVG00000002332	-	77	38.776	ENSPMEG00000011076	shq1	66	40.199	Poecilia_mexicana
ENSCSAVG00000002332	-	86	38.482	ENSPREG00000000591	shq1	66	39.359	Poecilia_reticulata
ENSCSAVG00000002332	-	88	43.325	ENSPPYG00000013717	SHQ1	68	43.325	Pongo_abelii
ENSCSAVG00000002332	-	88	42.250	ENSPCAG00000009035	SHQ1	69	42.356	Procavia_capensis
ENSCSAVG00000002332	-	88	41.809	ENSPCOG00000008415	SHQ1	68	43.142	Propithecus_coquereli
ENSCSAVG00000002332	-	88	41.133	ENSPVAG00000017392	SHQ1	69	42.607	Pteropus_vampyrus
ENSCSAVG00000002332	-	99	39.540	ENSPNYG00000003878	shq1	65	40.051	Pundamilia_nyererei
ENSCSAVG00000002332	-	97	37.907	ENSPNAG00000026840	shq1	64	39.186	Pygocentrus_nattereri
ENSCSAVG00000002332	-	98	39.509	ENSRNOG00000005433	Shq1	66	41.750	Rattus_norvegicus
ENSCSAVG00000002332	-	88	43.081	ENSRBIG00000026280	SHQ1	68	43.081	Rhinopithecus_bieti
ENSCSAVG00000002332	-	88	43.577	ENSRROG00000034126	SHQ1	69	43.577	Rhinopithecus_roxellana
ENSCSAVG00000002332	-	88	39.547	ENSSBOG00000021038	SHQ1	66	39.547	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002332	-	99	42.247	ENSSHAG00000015077	SHQ1	78	43.146	Sarcophilus_harrisii
ENSCSAVG00000002332	-	99	40.596	ENSSFOG00015016241	shq1	71	41.753	Scleropages_formosus
ENSCSAVG00000002332	-	98	40.741	ENSSMAG00000016151	shq1	67	39.268	Scophthalmus_maximus
ENSCSAVG00000002332	-	97	39.394	ENSSDUG00000011986	shq1	71	40.367	Seriola_dumerili
ENSCSAVG00000002332	-	97	39.667	ENSSLDG00000013908	shq1	66	39.461	Seriola_lalandi_dorsalis
ENSCSAVG00000002332	-	74	40.361	ENSSARG00000007119	SHQ1	59	40.361	Sorex_araneus
ENSCSAVG00000002332	-	78	40.223	ENSSPUG00000011526	-	58	40.635	Sphenodon_punctatus
ENSCSAVG00000002332	-	88	40.148	ENSSSCG00000011518	SHQ1	68	40.852	Sus_scrofa
ENSCSAVG00000002332	-	88	41.250	ENSTGUG00000009933	SHQ1	69	41.250	Taeniopygia_guttata
ENSCSAVG00000002332	-	88	36.923	ENSTRUG00000009446	shq1	66	37.150	Takifugu_rubripes
ENSCSAVG00000002332	-	88	37.310	ENSTNIG00000007354	shq1	87	37.563	Tetraodon_nigroviridis
ENSCSAVG00000002332	-	99	40.618	ENSTTRG00000005320	SHQ1	69	42.211	Tursiops_truncatus
ENSCSAVG00000002332	-	98	43.056	ENSUMAG00000024031	SHQ1	67	45.170	Ursus_maritimus
ENSCSAVG00000002332	-	88	42.118	ENSVVUG00000013906	SHQ1	68	42.714	Vulpes_vulpes
ENSCSAVG00000002332	-	98	42.396	ENSXETG00000032215	shq1	64	42.347	Xenopus_tropicalis