EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000002353 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
23129 bases
Position
chrreftig_122:312271-335399
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000003967DEADPF00270.294.4e-4811
ENSCSAVP00000003963DEADPF00270.295.7e-4811
ENSCSAVP00000003964DEADPF00270.296.2e-4811
ENSCSAVP00000003962DEADPF00270.297.3e-4811
ENSCSAVP00000003961DEADPF00270.298.4e-4811
ENSCSAVP00000003966DEADPF00270.298e-3511
ENSCSAVP00000003968DEADPF00270.293.1e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000004022-3148-ENSCSAVP00000003963939 (aa)-H2YF65
ENSCSAVT00000004023-2990-ENSCSAVP00000003964975 (aa)-H2YF66
ENSCSAVT00000004020-3181-ENSCSAVP000000039611041 (aa)-H2YF63
ENSCSAVT00000004021-3104-ENSCSAVP000000039621017 (aa)-H2YF64
ENSCSAVT00000004026-1893-ENSCSAVP00000003967631 (aa)-H2YF69
ENSCSAVT00000004027-1607-ENSCSAVP00000003968388 (aa)-H2YF70
ENSCSAVT00000004024-412-ENSCSAVP00000003965111 (aa)-H2YF67
ENSCSAVT00000004025-3008-ENSCSAVP00000003966990 (aa)-H2YF68
Gene Model
Click here to download ENSCSAVG00000002353's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002353's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000002353-6731.679ENSCSAVG00000000630-9830.435
ENSCSAVG00000002353-8438.889ENSCSAVG00000004304-7237.554
ENSCSAVG00000002353-8430.909ENSCSAVG00000000522-8134.286
ENSCSAVG00000002353-9031.781ENSCSAVG00000011566-9432.949
ENSCSAVG00000002353-7431.724ENSCSAVG00000003023-6633.248
ENSCSAVG00000002353-7031.673ENSCSAVG00000003835-9830.769
ENSCSAVG00000002353-7530.100ENSCSAVG00000009116-7030.086
ENSCSAVG00000002353-7236.918ENSCSAVG00000008916-10035.799
ENSCSAVG00000002353-7339.550ENSCSAVG00000004158-8635.698
ENSCSAVG00000002353-7031.313ENSCSAVG00000003375-6530.946
ENSCSAVG00000002353-7035.055ENSCSAVG00000009920-9833.423
ENSCSAVG00000002353-6530.841ENSCSAVG00000004895-8130.575
ENSCSAVG00000002353-7135.587ENSCSAVG00000006949-6434.700
ENSCSAVG00000002353-8541.983ENSCSAVG00000002180-9645.109
ENSCSAVG00000002353-5830.108ENSCSAVG00000002162-8530.108
ENSCSAVG00000002353-7030.526ENSCSAVG00000006341-8232.087
ENSCSAVG00000002353-6835.507ENSCSAVG00000004191-5535.211
ENSCSAVG00000002353-7130.645ENSCSAVG00000004227-7130.189
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000002353-9777.083ENSG00000145833DDX469973.913Homo_sapiens
ENSCSAVG00000002353-9775.781ENSAPOG00000000193ddx469563.974Acanthochromis_polyacanthus
ENSCSAVG00000002353-9777.083ENSAMEG00000017873DDX469164.482Ailuropoda_melanoleuca
ENSCSAVG00000002353-9775.260ENSACIG00000013235ddx469463.097Amphilophus_citrinellus
ENSCSAVG00000002353-9775.781ENSAOCG00000007758ddx469562.741Amphiprion_ocellaris
ENSCSAVG00000002353-9775.781ENSAPEG00000022648ddx469562.741Amphiprion_percula
ENSCSAVG00000002353-9775.781ENSATEG00000012998ddx469561.689Anabas_testudineus
ENSCSAVG00000002353-9776.302ENSAPLG00000013208DDX469263.655Anas_platyrhynchos
ENSCSAVG00000002353-9777.344ENSACAG00000001437DDX4610067.005Anolis_carolinensis
ENSCSAVG00000002353-9777.083ENSANAG00000032116DDX469165.561Aotus_nancymaae
ENSCSAVG00000002353-9775.521ENSACLG00000014804ddx469665.288Astatotilapia_calliptera
ENSCSAVG00000002353-9776.042ENSAMXG00000008413ddx469262.126Astyanax_mexicanus
ENSCSAVG00000002353-9777.083ENSBTAG00000021520DDX469164.482Bos_taurus
ENSCSAVG00000002353-9777.083ENSCJAG00000005697DDX469165.561Callithrix_jacchus
ENSCSAVG00000002353-9777.083ENSCAFG00000001048DDX469164.482Canis_familiaris
ENSCSAVG00000002353-9777.083ENSCAFG00020006070DDX469964.615Canis_lupus_dingo
ENSCSAVG00000002353-9777.083ENSCHIG00000026009DDX469166.231Capra_hircus
ENSCSAVG00000002353-9777.083ENSTSYG00000003177DDX469163.907Carlito_syrichta
ENSCSAVG00000002353-9777.083ENSCPOG00000011362DDX468965.514Cavia_porcellus
ENSCSAVG00000002353-9777.083ENSCCAG00000026721DDX469165.241Cebus_capucinus
ENSCSAVG00000002353-9777.083ENSCATG00000040891DDX469662.591Cercocebus_atys
ENSCSAVG00000002353-9777.083ENSCLAG00000014581DDX468965.514Chinchilla_lanigera
ENSCSAVG00000002353-8470.930ENSCHOG00000005683DDX467953.325Choloepus_hoffmanni
ENSCSAVG00000002353-9776.823ENSCPBG00000008261DDX469865.255Chrysemys_picta_bellii
ENSCSAVG00000002353-9389.488ENSCING00000006813-9987.179Ciona_intestinalis
ENSCSAVG00000002353-8275.767ENSCANG00000014766DDX468578.528Colobus_angolensis_palliatus
ENSCSAVG00000002353-9777.083ENSCGRG00001024140Ddx469360.101Cricetulus_griseus_chok1gshd
ENSCSAVG00000002353-9777.083ENSCGRG00000005152Ddx468965.693Cricetulus_griseus_crigri
ENSCSAVG00000002353-9776.302ENSCSEG00000016886ddx469762.803Cynoglossus_semilaevis
ENSCSAVG00000002353-9776.823ENSCVAG00000022900ddx469765.245Cyprinodon_variegatus
ENSCSAVG00000002353-9775.260ENSDARG00000099458ddx469263.868Danio_rerio
ENSCSAVG00000002353-9777.083ENSDNOG00000011448DDX469164.725Dasypus_novemcinctus
ENSCSAVG00000002353-9768.750ENSDORG00000005447Ddx469162.246Dipodomys_ordii
ENSCSAVG00000002353-6886.726ENSETEG00000018455DDX468056.545Echinops_telfairi
ENSCSAVG00000002353-9777.083ENSEASG00005020329DDX469962.130Equus_asinus_asinus
ENSCSAVG00000002353-9777.083ENSECAG00000018217DDX469164.550Equus_caballus
ENSCSAVG00000002353-8268.807ENSEEUG00000003602-5964.924Erinaceus_europaeus
ENSCSAVG00000002353-9776.302ENSELUG00000000817ddx469663.753Esox_lucius
ENSCSAVG00000002353-9777.083ENSFCAG00000026229DDX469164.550Felis_catus
ENSCSAVG00000002353-9776.302ENSFALG00000007947DDX4610066.554Ficedula_albicollis
ENSCSAVG00000002353-9777.083ENSFDAG00000021262DDX468965.476Fukomys_damarensis
ENSCSAVG00000002353-9777.083ENSFHEG00000020055ddx469664.681Fundulus_heteroclitus
ENSCSAVG00000002353-9575.726ENSGMOG00000007990ddx469363.152Gadus_morhua
ENSCSAVG00000002353-9776.562ENSGALG00000006404DDX469163.646Gallus_gallus
ENSCSAVG00000002353-9776.042ENSGAFG00000007153ddx469659.874Gambusia_affinis
ENSCSAVG00000002353-9776.042ENSGACG00000000166ddx469462.162Gasterosteus_aculeatus
ENSCSAVG00000002353-9776.823ENSGAGG00000014910DDX469263.843Gopherus_agassizii
ENSCSAVG00000002353-9777.083ENSGGOG00000013843DDX469165.561Gorilla_gorilla
ENSCSAVG00000002353-9775.521ENSHBUG00000021074ddx469665.071Haplochromis_burtoni
ENSCSAVG00000002353-9777.083ENSHGLG00000010455DDX469365.476Heterocephalus_glaber_female
ENSCSAVG00000002353-9777.083ENSHGLG00100016515DDX469365.476Heterocephalus_glaber_male
ENSCSAVG00000002353-5964.255ENSIPUG00000025041-8364.255Ictalurus_punctatus
ENSCSAVG00000002353-9776.302ENSIPUG00000002564ddx469460.545Ictalurus_punctatus
ENSCSAVG00000002353-7971.293ENSIPUG00000018977-9272.182Ictalurus_punctatus
ENSCSAVG00000002353-9777.083ENSSTOG00000025564DDX468361.935Ictidomys_tridecemlineatus
ENSCSAVG00000002353-9777.083ENSJJAG00000013906Ddx468965.584Jaculus_jaculus
ENSCSAVG00000002353-9776.042ENSKMAG00000019510ddx469561.100Kryptolebias_marmoratus
ENSCSAVG00000002353-9776.042ENSLBEG00000027425ddx469760.673Labrus_bergylta
ENSCSAVG00000002353-9776.562ENSLACG00000007965DDX469363.816Latimeria_chalumnae
ENSCSAVG00000002353-9776.823ENSLOCG00000010169ddx469263.005Lepisosteus_oculatus
ENSCSAVG00000002353-9777.083ENSLAFG00000010465DDX469164.203Loxodonta_africana
ENSCSAVG00000002353-9777.083ENSMFAG00000044528DDX469662.591Macaca_fascicularis
ENSCSAVG00000002353-9777.083ENSMMUG00000012463DDX468664.938Macaca_mulatta
ENSCSAVG00000002353-9777.083ENSMNEG00000029903DDX469662.591Macaca_nemestrina
ENSCSAVG00000002353-9777.083ENSMLEG00000033516DDX469662.591Mandrillus_leucophaeus
ENSCSAVG00000002353-9776.302ENSMAMG00000021755ddx469758.857Mastacembelus_armatus
ENSCSAVG00000002353-9775.521ENSMZEG00005008989ddx469665.288Maylandia_zebra
ENSCSAVG00000002353-9776.562ENSMGAG00000008226DDX469264.588Meleagris_gallopavo
ENSCSAVG00000002353-9776.823ENSMAUG00000003267Ddx469264.762Mesocricetus_auratus
ENSCSAVG00000002353-9777.083ENSMICG00000028626DDX469164.103Microcebus_murinus
ENSCSAVG00000002353-9777.083ENSMOCG00000012141Ddx468564.994Microtus_ochrogaster
ENSCSAVG00000002353-9776.042ENSMMOG00000013470ddx469664.719Mola_mola
ENSCSAVG00000002353-9777.083ENSMODG00000014331DDX469164.905Monodelphis_domestica
ENSCSAVG00000002353-9776.042ENSMALG00000016796ddx469663.492Monopterus_albus
ENSCSAVG00000002353-9777.083MGP_CAROLIEiJ_G0018573Ddx468965.838Mus_caroli
ENSCSAVG00000002353-9777.083ENSMUSG00000021500Ddx468965.767Mus_musculus
ENSCSAVG00000002353-9777.083MGP_PahariEiJ_G0019638Ddx468965.838Mus_pahari
ENSCSAVG00000002353-9777.083MGP_SPRETEiJ_G0019453Ddx468965.838Mus_spretus
ENSCSAVG00000002353-9777.083ENSMPUG00000010045DDX469164.482Mustela_putorius_furo
ENSCSAVG00000002353-9777.083ENSMLUG00000012607DDX469164.942Myotis_lucifugus
ENSCSAVG00000002353-9777.083ENSNGAG00000020157Ddx469265.584Nannospalax_galili
ENSCSAVG00000002353-9775.521ENSNBRG00000008155ddx469665.180Neolamprologus_brichardi
ENSCSAVG00000002353-9777.083ENSNLEG00000008167DDX469165.561Nomascus_leucogenys
ENSCSAVG00000002353-5775.100ENSMEUG00000014890-6566.210Notamacropus_eugenii
ENSCSAVG00000002353-9775.260ENSOPRG00000006646DDX468965.152Ochotona_princeps
ENSCSAVG00000002353-9777.083ENSODEG00000010023DDX468965.584Octodon_degus
ENSCSAVG00000002353-9775.781ENSONIG00000017282ddx469263.627Oreochromis_niloticus
ENSCSAVG00000002353-9777.083ENSOANG00000001842DDX469864.731Ornithorhynchus_anatinus
ENSCSAVG00000002353-9777.083ENSOCUG00000012206DDX469164.947Oryctolagus_cuniculus
ENSCSAVG00000002353-9776.042ENSORLG00000000903ddx469664.952Oryzias_latipes
ENSCSAVG00000002353-9776.042ENSORLG00020022093ddx469664.952Oryzias_latipes_hni
ENSCSAVG00000002353-9776.042ENSORLG00015007282ddx469665.059Oryzias_latipes_hsok
ENSCSAVG00000002353-9776.302ENSOMEG00000003338ddx469664.606Oryzias_melastigma
ENSCSAVG00000002353-9763.542ENSOGAG00000011690-9158.174Otolemur_garnettii
ENSCSAVG00000002353-9776.302ENSOGAG00000034921-9164.444Otolemur_garnettii
ENSCSAVG00000002353-9777.083ENSOARG00000014348DDX468965.693Ovis_aries
ENSCSAVG00000002353-9777.083ENSPPAG00000037804DDX469165.561Pan_paniscus
ENSCSAVG00000002353-9777.083ENSPPRG00000010743DDX469164.550Panthera_pardus
ENSCSAVG00000002353-9777.083ENSPTIG00000012382DDX469164.444Panthera_tigris_altaica
ENSCSAVG00000002353-9777.083ENSPTRG00000017248DDX469165.561Pan_troglodytes
ENSCSAVG00000002353-9777.083ENSPANG00000025084DDX468962.595Papio_anubis
ENSCSAVG00000002353-9775.781ENSPKIG00000010351ddx469264.026Paramormyrops_kingsleyae
ENSCSAVG00000002353-9776.823ENSPSIG00000004522DDX469164.323Pelodiscus_sinensis
ENSCSAVG00000002353-9777.083ENSPEMG00000013593Ddx468965.693Peromyscus_maniculatus_bairdii
ENSCSAVG00000002353-9772.917ENSPMAG00000007922ddx468764.066Petromyzon_marinus
ENSCSAVG00000002353-9777.083ENSPCIG00000009215DDX4610067.537Phascolarctos_cinereus
ENSCSAVG00000002353-9776.042ENSPFOG00000004966ddx469359.462Poecilia_formosa
ENSCSAVG00000002353-9776.302ENSPLAG00000023562ddx469364.278Poecilia_latipinna
ENSCSAVG00000002353-9776.042ENSPMEG00000013401ddx469464.588Poecilia_mexicana
ENSCSAVG00000002353-9776.302ENSPREG00000005444ddx469359.307Poecilia_reticulata
ENSCSAVG00000002353-9770.833ENSPPYG00000015792DDX469071.345Pongo_abelii
ENSCSAVG00000002353-9766.927ENSPCAG00000012364DDX467167.667Procavia_capensis
ENSCSAVG00000002353-9763.200ENSPCOG00000018969DDX469464.118Propithecus_coquereli
ENSCSAVG00000002353-9975.696ENSPVAG00000015655DDX469661.900Pteropus_vampyrus
ENSCSAVG00000002353-9775.521ENSPNYG00000012327ddx469564.565Pundamilia_nyererei
ENSCSAVG00000002353-9775.781ENSPNAG00000010806ddx469063.197Pygocentrus_nattereri
ENSCSAVG00000002353-9777.083ENSRNOG00000021637Ddx468965.767Rattus_norvegicus
ENSCSAVG00000002353-9777.083ENSRBIG00000041150DDX468872.957Rhinopithecus_bieti
ENSCSAVG00000002353-9777.083ENSRROG00000029467DDX469662.591Rhinopithecus_roxellana
ENSCSAVG00000002353-8967.101ENSSBOG00000027666DDX468967.101Saimiri_boliviensis_boliviensis
ENSCSAVG00000002353-9777.083ENSSHAG00000014408DDX468164.905Sarcophilus_harrisii
ENSCSAVG00000002353-9972.414ENSSFOG00015020093ddx469763.836Scleropages_formosus
ENSCSAVG00000002353-9775.521ENSSMAG00000007229ddx469658.949Scophthalmus_maximus
ENSCSAVG00000002353-9775.781ENSSDUG00000020991ddx469565.902Seriola_dumerili
ENSCSAVG00000002353-9775.781ENSSLDG00000016854ddx469565.902Seriola_lalandi_dorsalis
ENSCSAVG00000002353-9766.927ENSSARG00000011073DDX4610062.584Sorex_araneus
ENSCSAVG00000002353-9777.344ENSSPUG00000008985DDX4610066.400Sphenodon_punctatus
ENSCSAVG00000002353-9776.042ENSSPAG00000017946ddx469563.141Stegastes_partitus
ENSCSAVG00000002353-9777.083ENSSSCG00000026644DDX469164.482Sus_scrofa
ENSCSAVG00000002353-9776.302ENSTGUG00000001260-9164.076Taeniopygia_guttata
ENSCSAVG00000002353-9776.823ENSTRUG00000008878ddx469559.789Takifugu_rubripes
ENSCSAVG00000002353-9777.344ENSTNIG00000016100ddx469164.547Tetraodon_nigroviridis
ENSCSAVG00000002353-9777.083ENSTBEG00000002799DDX468174.118Tupaia_belangeri
ENSCSAVG00000002353-9763.542ENSTTRG00000016869DDX469158.836Tursiops_truncatus
ENSCSAVG00000002353-9771.354ENSUMAG00000017446DDX469162.222Ursus_maritimus
ENSCSAVG00000002353-9770.312ENSVPAG00000001591DDX468962.771Vicugna_pacos
ENSCSAVG00000002353-9777.083ENSVVUG00000017549DDX469465.625Vulpes_vulpes
ENSCSAVG00000002353-9778.125ENSXETG00000010405ddx469463.405Xenopus_tropicalis
ENSCSAVG00000002353-9776.562ENSXCOG00000004162ddx469463.883Xiphophorus_couchianus
ENSCSAVG00000002353-9776.562ENSXMAG00000008312ddx469964.619Xiphophorus_maculatus

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