EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000002367 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
3943 bases
Position
chrreftig_3:422864-426806
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000004000GCD14PF08704.109.5e-0611
ENSCSAVP00000003999GCD14PF08704.101.5e-0511
ENSCSAVP00000003998GCD14PF08704.101.9e-0511
ENSCSAVP00000003998FibrillarinPF01269.175.6e-10811
ENSCSAVP00000003999FibrillarinPF01269.175.8e-10811
ENSCSAVP00000004000FibrillarinPF01269.171.3e-9111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000004057-1224-ENSCSAVP00000003998306 (aa)-H2YFA0
ENSCSAVT00000004059-608-ENSCSAVP00000004000189 (aa)-H2YFA2
ENSCSAVT00000004058-1007-ENSCSAVP00000003999275 (aa)-H2YFA1
Gene Model
Click here to download ENSCSAVG00000002367's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002367's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000002367-10083.069ENSG00000105202FBL10083.406Homo_sapiens
ENSCSAVG00000002367-9879.570ENSG00000188573FBLL18170.111Homo_sapiens
ENSCSAVG00000002367-9986.096ENSAPOG00000015135fbl8878.322Acanthochromis_polyacanthus
ENSCSAVG00000002367-9879.570ENSAMEG00000007104FBLL19178.017Ailuropoda_melanoleuca
ENSCSAVG00000002367-10083.069ENSAMEG00000012669FBL6982.278Ailuropoda_melanoleuca
ENSCSAVG00000002367-9985.027ENSACIG00000010958fbl7984.649Amphilophus_citrinellus
ENSCSAVG00000002367-9985.561ENSAOCG00000008806fbl8877.972Amphiprion_ocellaris
ENSCSAVG00000002367-9985.561ENSAPEG00000011843fbl8877.972Amphiprion_percula
ENSCSAVG00000002367-9985.561ENSATEG00000000569fbl9273.356Anabas_testudineus
ENSCSAVG00000002367-9886.022ENSACAG00000016787-7585.043Anolis_carolinensis
ENSCSAVG00000002367-9176.163ENSANAG00000019689-7174.545Aotus_nancymaae
ENSCSAVG00000002367-10083.069ENSANAG00000029424-8382.627Aotus_nancymaae
ENSCSAVG00000002367-9985.561ENSACLG00000005227fbl7584.322Astatotilapia_calliptera
ENSCSAVG00000002367-9586.111ENSAMXG00000037402fbl7674.170Astyanax_mexicanus
ENSCSAVG00000002367-9879.570ENSBTAG00000004657FBLL18077.021Bos_taurus
ENSCSAVG00000002367-10083.069ENSBTAG00000002579FBL7382.627Bos_taurus
ENSCSAVG00000002367-10074.074WBGene00001423fib-18366.781Caenorhabditis_elegans
ENSCSAVG00000002367-9879.570ENSCJAG00000015548FBLL17870.342Callithrix_jacchus
ENSCSAVG00000002367-10083.069ENSCJAG00000040785FBL6576.923Callithrix_jacchus
ENSCSAVG00000002367-10083.069ENSCAFG00000005412FBL7582.627Canis_familiaris
ENSCSAVG00000002367-10083.069ENSCAFG00020015639FBL7376.744Canis_lupus_dingo
ENSCSAVG00000002367-10078.836ENSCAFG00020003509FBLL18571.705Canis_lupus_dingo
ENSCSAVG00000002367-10083.069ENSCHIG00000021562FBL8076.226Capra_hircus
ENSCSAVG00000002367-9879.570ENSCHIG00000005751FBLL18369.582Capra_hircus
ENSCSAVG00000002367-10083.069ENSTSYG00000036873FBL7382.627Carlito_syrichta
ENSCSAVG00000002367-10077.778ENSTSYG00000030585FBLL19076.824Carlito_syrichta
ENSCSAVG00000002367-9980.749ENSCAPG00000009974FBL6580.749Cavia_aperea
ENSCSAVG00000002367-9268.966ENSCAPG00000008751FBLL110069.683Cavia_aperea
ENSCSAVG00000002367-10068.783ENSCPOG00000025737FBLL17169.492Cavia_porcellus
ENSCSAVG00000002367-10082.540ENSCPOG00000010192FBL9073.498Cavia_porcellus
ENSCSAVG00000002367-9879.570ENSCCAG00000033894FBLL18070.896Cebus_capucinus
ENSCSAVG00000002367-10083.069ENSCCAG00000004830FBL7482.278Cebus_capucinus
ENSCSAVG00000002367-10083.069ENSCATG00000039255FBL7482.278Cercocebus_atys
ENSCSAVG00000002367-9878.495ENSCLAG00000018056FBLL19177.682Chinchilla_lanigera
ENSCSAVG00000002367-10083.069ENSCLAG00000001639FBL8871.284Chinchilla_lanigera
ENSCSAVG00000002367-10083.069ENSCSAG00000003783FBL7582.278Chlorocebus_sabaeus
ENSCSAVG00000002367-9879.570ENSCSAG00000010153FBLL17378.017Chlorocebus_sabaeus
ENSCSAVG00000002367-9886.559ENSCPBG00000024047-7485.470Chrysemys_picta_bellii
ENSCSAVG00000002367-10098.413ENSCING00000005048-9292.657Ciona_intestinalis
ENSCSAVG00000002367-9879.570ENSCANG00000043304FBLL17878.017Colobus_angolensis_palliatus
ENSCSAVG00000002367-10083.069ENSCANG00000042053FBL7482.278Colobus_angolensis_palliatus
ENSCSAVG00000002367-9879.570ENSCGRG00001010028Fbll18370.566Cricetulus_griseus_chok1gshd
ENSCSAVG00000002367-8567.901ENSCGRG00001024532-6267.895Cricetulus_griseus_chok1gshd
ENSCSAVG00000002367-10083.069ENSCGRG00001021702-7483.043Cricetulus_griseus_chok1gshd
ENSCSAVG00000002367-10083.069ENSCGRG00000012705Fbl7483.043Cricetulus_griseus_crigri
ENSCSAVG00000002367-9986.096ENSCSEG00000010310fbl8581.369Cynoglossus_semilaevis
ENSCSAVG00000002367-9983.957ENSCVAG00000015561fbl7583.404Cyprinodon_variegatus
ENSCSAVG00000002367-9886.022ENSDARG00000053912fbl7485.043Danio_rerio
ENSCSAVG00000002367-10082.540ENSDNOG00000025216FBL7481.857Dasypus_novemcinctus
ENSCSAVG00000002367-10083.069ENSDORG00000005756Fbl7782.627Dipodomys_ordii
ENSCSAVG00000002367-9448.333FBgn0038090CG109096643.103Drosophila_melanogaster
ENSCSAVG00000002367-10086.772FBgn0003062Fib8378.873Drosophila_melanogaster
ENSCSAVG00000002367-8558.120ENSETEG00000003164FBL8353.759Echinops_telfairi
ENSCSAVG00000002367-9884.409ENSEBUG00000016084fbl9783.333Eptatretus_burgeri
ENSCSAVG00000002367-9879.570ENSEASG00005012784FBLL18265.217Equus_asinus_asinus
ENSCSAVG00000002367-10083.069ENSEASG00005011787FBL5782.278Equus_asinus_asinus
ENSCSAVG00000002367-9879.570ENSECAG00000023600FBLL18766.090Equus_caballus
ENSCSAVG00000002367-10083.069ENSECAG00000023221FBL8175.926Equus_caballus
ENSCSAVG00000002367-9886.022ENSELUG00000022537fbl9173.234Esox_lucius
ENSCSAVG00000002367-10083.069ENSFCAG00000003026FBL8674.444Felis_catus
ENSCSAVG00000002367-10082.540ENSFDAG00000021499FBL9173.129Fukomys_damarensis
ENSCSAVG00000002367-9879.570ENSFDAG00000018404FBLL18078.541Fukomys_damarensis
ENSCSAVG00000002367-9984.492ENSFHEG00000010854fbl7483.830Fundulus_heteroclitus
ENSCSAVG00000002367-9985.561ENSGMOG00000007678fbl7485.022Gadus_morhua
ENSCSAVG00000002367-8686.503ENSGAFG00000008992fbl10085.308Gambusia_affinis
ENSCSAVG00000002367-9887.097ENSGACG00000004194fbl9886.344Gasterosteus_aculeatus
ENSCSAVG00000002367-9886.022ENSGAGG00000003006-7075.180Gopherus_agassizii
ENSCSAVG00000002367-10083.069ENSGGOG00000013076FBL7482.278Gorilla_gorilla
ENSCSAVG00000002367-9985.561ENSHBUG00000011229fbl7584.322Haplochromis_burtoni
ENSCSAVG00000002367-9879.570ENSHGLG00000015259FBLL17678.541Heterocephalus_glaber_female
ENSCSAVG00000002367-10082.540ENSHGLG00000009686FBL7481.857Heterocephalus_glaber_female
ENSCSAVG00000002367-9879.570ENSHGLG00100021287FBLL19278.541Heterocephalus_glaber_male
ENSCSAVG00000002367-10082.540ENSHGLG00100015471FBL7481.857Heterocephalus_glaber_male
ENSCSAVG00000002367-9985.561ENSHCOG00000021211fbl7684.681Hippocampus_comes
ENSCSAVG00000002367-9886.022ENSIPUG00000009464fbl8576.557Ictalurus_punctatus
ENSCSAVG00000002367-8280.645ENSSTOG00000031046FBLL19678.607Ictidomys_tridecemlineatus
ENSCSAVG00000002367-10082.540ENSSTOG00000012486FBL7482.203Ictidomys_tridecemlineatus
ENSCSAVG00000002367-10082.540ENSJJAG00000018359Fbl8076.515Jaculus_jaculus
ENSCSAVG00000002367-10078.307ENSJJAG00000000811Fbll18376.793Jaculus_jaculus
ENSCSAVG00000002367-9984.492ENSKMAG00000003716fbl7683.830Kryptolebias_marmoratus
ENSCSAVG00000002367-9987.166ENSLBEG00000017315fbl8185.532Labrus_bergylta
ENSCSAVG00000002367-9863.978ENSLACG00000014561fbl6766.667Latimeria_chalumnae
ENSCSAVG00000002367-5893.636ENSLOCG00000004721fbl10089.873Lepisosteus_oculatus
ENSCSAVG00000002367-10082.540ENSLAFG00000000171FBL7582.203Loxodonta_africana
ENSCSAVG00000002367-9879.032ENSLAFG00000032132FBLL19878.017Loxodonta_africana
ENSCSAVG00000002367-9879.570ENSMFAG00000036422FBLL18278.017Macaca_fascicularis
ENSCSAVG00000002367-10083.069ENSMFAG00000043908FBL7482.278Macaca_fascicularis
ENSCSAVG00000002367-9879.570ENSMMUG00000012520FBLL18873.004Macaca_mulatta
ENSCSAVG00000002367-10083.069ENSMMUG00000022725FBL7982.873Macaca_mulatta
ENSCSAVG00000002367-10083.069ENSMNEG00000040045FBL8576.580Macaca_nemestrina
ENSCSAVG00000002367-9879.570ENSMLEG00000040259FBLL17478.017Mandrillus_leucophaeus
ENSCSAVG00000002367-10083.069ENSMLEG00000042975FBL8576.580Mandrillus_leucophaeus
ENSCSAVG00000002367-9986.096ENSMAMG00000006804fbl7885.965Mastacembelus_armatus
ENSCSAVG00000002367-9985.561ENSMZEG00005025246fbl7584.322Maylandia_zebra
ENSCSAVG00000002367-9879.570ENSMAUG00000015741Fbll17678.879Mesocricetus_auratus
ENSCSAVG00000002367-10083.069ENSMAUG00000003620Fbl7282.627Mesocricetus_auratus
ENSCSAVG00000002367-10082.540ENSMICG00000007686FBL8176.357Microcebus_murinus
ENSCSAVG00000002367-10083.069ENSMOCG00000012820Fbl7283.043Microtus_ochrogaster
ENSCSAVG00000002367-9880.108ENSMOCG00000022683Fbll17879.310Microtus_ochrogaster
ENSCSAVG00000002367-9985.561ENSMMOG00000006454fbl8085.088Mola_mola
ENSCSAVG00000002367-9886.022ENSMODG00000013702-8573.646Monodelphis_domestica
ENSCSAVG00000002367-9986.631ENSMALG00000015601fbl8085.106Monopterus_albus
ENSCSAVG00000002367-10083.069MGP_CAROLIEiJ_G0029434Fbl8973.333Mus_caroli
ENSCSAVG00000002367-9880.108MGP_CAROLIEiJ_G0016207Fbll18471.923Mus_caroli
ENSCSAVG00000002367-9880.108ENSMUSG00000051062Fbll17478.970Mus_musculus
ENSCSAVG00000002367-10083.069ENSMUSG00000046865Fbl8772.982Mus_musculus
ENSCSAVG00000002367-10083.069MGP_PahariEiJ_G0012670Fbl8973.684Mus_pahari
ENSCSAVG00000002367-9880.108MGP_PahariEiJ_G0017343Fbll17378.879Mus_pahari
ENSCSAVG00000002367-9880.108MGP_SPRETEiJ_G0017048Fbll17478.970Mus_spretus
ENSCSAVG00000002367-10083.069MGP_SPRETEiJ_G0030532Fbl8772.982Mus_spretus
ENSCSAVG00000002367-10077.778ENSMPUG00000013045FBLL18876.596Mustela_putorius_furo
ENSCSAVG00000002367-9879.032ENSMLUG00000011858FBLL15879.032Myotis_lucifugus
ENSCSAVG00000002367-7689.510ENSMLUG00000030525FBL9886.911Myotis_lucifugus
ENSCSAVG00000002367-10083.069ENSNGAG00000022243Fbl8078.800Nannospalax_galili
ENSCSAVG00000002367-9880.108ENSNGAG00000012285Fbll17478.448Nannospalax_galili
ENSCSAVG00000002367-9985.561ENSNBRG00000024409fbl8084.681Neolamprologus_brichardi
ENSCSAVG00000002367-9879.570ENSNLEG00000031565FBLL17969.549Nomascus_leucogenys
ENSCSAVG00000002367-10082.540ENSNLEG00000014234FBL7381.857Nomascus_leucogenys
ENSCSAVG00000002367-9885.484ENSMEUG00000014684-7982.449Notamacropus_eugenii
ENSCSAVG00000002367-6386.555ENSOPRG00000004127-9981.818Ochotona_princeps
ENSCSAVG00000002367-5683.673ENSOPRG00000010475-6381.818Ochotona_princeps
ENSCSAVG00000002367-10078.307ENSODEG00000019199FBLL17872.908Octodon_degus
ENSCSAVG00000002367-10082.540ENSODEG00000001001FBL8576.000Octodon_degus
ENSCSAVG00000002367-9985.561ENSONIG00000008042fbl7284.681Oreochromis_niloticus
ENSCSAVG00000002367-9883.957ENSOANG00000014658-8783.857Ornithorhynchus_anatinus
ENSCSAVG00000002367-10082.540ENSOCUG00000009027FBL9082.203Oryctolagus_cuniculus
ENSCSAVG00000002367-9880.108ENSOCUG00000007557FBLL18778.448Oryctolagus_cuniculus
ENSCSAVG00000002367-9985.027ENSORLG00000003405fbl6684.649Oryzias_latipes
ENSCSAVG00000002367-9985.027ENSORLG00020022508fbl7384.255Oryzias_latipes_hni
ENSCSAVG00000002367-9985.027ENSORLG00015011532fbl7384.255Oryzias_latipes_hsok
ENSCSAVG00000002367-9984.492ENSOMEG00000019309fbl7784.716Oryzias_melastigma
ENSCSAVG00000002367-10082.540ENSOGAG00000006463FBL7476.744Otolemur_garnettii
ENSCSAVG00000002367-10083.069ENSOARG00000006339FBL6882.278Ovis_aries
ENSCSAVG00000002367-9879.459ENSOARG00000014603FBLL18975.758Ovis_aries
ENSCSAVG00000002367-10083.069ENSPPAG00000034630FBL7482.278Pan_paniscus
ENSCSAVG00000002367-9879.570ENSPPAG00000015519-8878.855Pan_paniscus
ENSCSAVG00000002367-9879.570ENSPPRG00000020963FBLL15277.021Panthera_pardus
ENSCSAVG00000002367-10083.069ENSPPRG00000002187FBL8674.444Panthera_pardus
ENSCSAVG00000002367-10083.069ENSPTIG00000008381FBL8282.278Panthera_tigris_altaica
ENSCSAVG00000002367-10082.011ENSPTRG00000040021-7281.395Pan_troglodytes
ENSCSAVG00000002367-9879.570ENSPTRG00000046755FBLL17078.017Pan_troglodytes
ENSCSAVG00000002367-10083.069ENSPTRG00000010982FBL7482.278Pan_troglodytes
ENSCSAVG00000002367-10083.069ENSPANG00000004118FBL7482.278Papio_anubis
ENSCSAVG00000002367-9879.570ENSPANG00000024859FBLL17969.811Papio_anubis
ENSCSAVG00000002367-9887.634ENSPKIG00000018971fbl7485.897Paramormyrops_kingsleyae
ENSCSAVG00000002367-9886.559ENSPSIG00000004704-9285.897Pelodiscus_sinensis
ENSCSAVG00000002367-9586.592ENSPMGG00000003564fbl7685.463Periophthalmus_magnuspinnatus
ENSCSAVG00000002367-10083.069ENSPEMG00000015440-7383.043Peromyscus_maniculatus_bairdii
ENSCSAVG00000002367-9880.108ENSPEMG00000020325Fbll17477.447Peromyscus_maniculatus_bairdii
ENSCSAVG00000002367-9879.032ENSPMAG00000007777fbl7177.966Petromyzon_marinus
ENSCSAVG00000002367-9886.022ENSPCIG00000014607-7285.043Phascolarctos_cinereus
ENSCSAVG00000002367-9985.027ENSPFOG00000000133fbl7684.255Poecilia_formosa
ENSCSAVG00000002367-9985.027ENSPLAG00000021499fbl8684.649Poecilia_latipinna
ENSCSAVG00000002367-9985.027ENSPMEG00000001897fbl7684.255Poecilia_mexicana
ENSCSAVG00000002367-9985.027ENSPREG00000018169fbl7684.255Poecilia_reticulata
ENSCSAVG00000002367-10083.069ENSPPYG00000009979FBL7382.278Pongo_abelii
ENSCSAVG00000002367-10065.608ENSPCAG00000011523FBL7568.644Procavia_capensis
ENSCSAVG00000002367-10082.540ENSPCOG00000015915FBL7381.857Propithecus_coquereli
ENSCSAVG00000002367-9879.570ENSPCOG00000020746FBLL17778.017Propithecus_coquereli
ENSCSAVG00000002367-10082.540ENSPVAG00000010849FBL7878.947Pteropus_vampyrus
ENSCSAVG00000002367-9985.561ENSPNYG00000014278fbl7584.322Pundamilia_nyererei
ENSCSAVG00000002367-10084.656ENSPNAG00000020888fbl7585.398Pygocentrus_nattereri
ENSCSAVG00000002367-9880.108ENSRNOG00000015303Fbll17278.879Rattus_norvegicus
ENSCSAVG00000002367-10083.069ENSRNOG00000019229Fbl8773.333Rattus_norvegicus
ENSCSAVG00000002367-10083.069ENSRBIG00000029089FBL7482.278Rhinopithecus_bieti
ENSCSAVG00000002367-10083.069ENSRROG00000012374FBL8671.777Rhinopithecus_roxellana
ENSCSAVG00000002367-9970.103YDL014WNOP17268.803Saccharomyces_cerevisiae
ENSCSAVG00000002367-10083.069ENSSBOG00000033498FBL7482.627Saimiri_boliviensis_boliviensis
ENSCSAVG00000002367-9879.570ENSSBOG00000019476FBLL17978.017Saimiri_boliviensis_boliviensis
ENSCSAVG00000002367-9885.484ENSSHAG00000003274-7284.615Sarcophilus_harrisii
ENSCSAVG00000002367-9887.097ENSSFOG00015019399fbl8277.992Scleropages_formosus
ENSCSAVG00000002367-9985.561ENSSMAG00000011853fbl7584.649Scophthalmus_maximus
ENSCSAVG00000002367-9986.096ENSSDUG00000004103fbl7284.681Seriola_dumerili
ENSCSAVG00000002367-9986.096ENSSLDG00000010053fbl7284.681Seriola_lalandi_dorsalis
ENSCSAVG00000002367-9986.096ENSSLDG00000002539-9184.716Seriola_lalandi_dorsalis
ENSCSAVG00000002367-10069.312ENSSARG00000008709FBL8267.050Sorex_araneus
ENSCSAVG00000002367-9884.409ENSSPUG00000004770-7384.120Sphenodon_punctatus
ENSCSAVG00000002367-9985.561ENSSPAG00000019953fbl8679.412Stegastes_partitus
ENSCSAVG00000002367-10083.069ENSSSCG00000030510FBL8875.714Sus_scrofa
ENSCSAVG00000002367-9879.570ENSSSCG00000017013FBLL15679.570Sus_scrofa
ENSCSAVG00000002367-9985.561ENSTRUG00000004408fbl8085.652Takifugu_rubripes
ENSCSAVG00000002367-9985.027ENSTNIG00000011668fbl7684.255Tetraodon_nigroviridis
ENSCSAVG00000002367-10083.069ENSTBEG00000007755FBL7482.627Tupaia_belangeri
ENSCSAVG00000002367-10081.481ENSTTRG00000003967FBL7381.356Tursiops_truncatus
ENSCSAVG00000002367-9879.032ENSTTRG00000016156FBLL18366.065Tursiops_truncatus
ENSCSAVG00000002367-9879.570ENSUAMG00000023304FBLL18467.986Ursus_americanus
ENSCSAVG00000002367-10083.069ENSUAMG00000001699FBL7582.627Ursus_americanus
ENSCSAVG00000002367-9584.358ENSUMAG00000019597FBL7773.408Ursus_maritimus
ENSCSAVG00000002367-9879.032ENSVVUG00000003074FBLL18077.586Vulpes_vulpes
ENSCSAVG00000002367-10083.069ENSVVUG00000006111FBL7582.627Vulpes_vulpes
ENSCSAVG00000002367-9987.166ENSXETG00000017830fbl8480.147Xenopus_tropicalis
ENSCSAVG00000002367-9985.027ENSXCOG00000017201fbl6884.649Xiphophorus_couchianus
ENSCSAVG00000002367-9985.027ENSXMAG00000008522fbl7584.255Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us