EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002430 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5966 bases
Position: chrreftig_51:489573-495538
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004133	PAT1	PF09770.9	6.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004195	-	1641	-	ENSCSAVP00000004133	371 (aa)	-	H2YFN5

Gene Model

Click here to download ENSCSAVG00000002430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002430	-	77	31.879	ENSG00000229474	PATL2	80	32.215	Homo_sapiens
ENSCSAVG00000002430	-	77	30.537	ENSAMEG00000014997	PATL2	54	30.872	Ailuropoda_melanoleuca
ENSCSAVG00000002430	-	72	37.455	ENSAPLG00000013394	PATL1	55	37.455	Anas_platyrhynchos
ENSCSAVG00000002430	-	68	32.692	ENSACAG00000006951	-	67	32.692	Anolis_carolinensis
ENSCSAVG00000002430	-	77	30.872	ENSANAG00000022701	PATL2	52	31.208	Aotus_nancymaae
ENSCSAVG00000002430	-	77	31.544	ENSBTAG00000001558	PATL2	79	31.544	Bos_taurus
ENSCSAVG00000002430	-	77	31.229	ENSCJAG00000002379	PATL2	52	31.683	Callithrix_jacchus
ENSCSAVG00000002430	-	77	30.872	ENSCAFG00000013629	PATL2	52	30.872	Canis_familiaris
ENSCSAVG00000002430	-	77	30.872	ENSCAFG00020022169	PATL2	52	30.872	Canis_lupus_dingo
ENSCSAVG00000002430	-	77	31.879	ENSCHIG00000026665	PATL2	53	31.879	Capra_hircus
ENSCSAVG00000002430	-	77	31.544	ENSTSYG00000032456	PATL2	52	31.544	Carlito_syrichta
ENSCSAVG00000002430	-	77	30.392	ENSCCAG00000025261	PATL2	53	31.333	Cebus_capucinus
ENSCSAVG00000002430	-	77	30.872	ENSCATG00000034794	PATL2	80	31.208	Cercocebus_atys
ENSCSAVG00000002430	-	77	30.537	ENSCSAG00000009601	PATL2	52	30.872	Chlorocebus_sabaeus
ENSCSAVG00000002430	-	76	32.203	ENSCGRG00001010801	Patl2	56	32.215	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002430	-	76	32.203	ENSCGRG00000013007	Patl2	56	32.215	Cricetulus_griseus_crigri
ENSCSAVG00000002430	-	79	35.127	ENSDNOG00000038865	PATL1	55	35.127	Dasypus_novemcinctus
ENSCSAVG00000002430	-	77	30.667	ENSETEG00000005068	PATL2	80	30.976	Echinops_telfairi
ENSCSAVG00000002430	-	77	31.208	ENSGGOG00000025923	PATL2	52	31.208	Gorilla_gorilla
ENSCSAVG00000002430	-	77	30.565	ENSSTOG00000033848	PATL2	52	30.872	Ictidomys_tridecemlineatus
ENSCSAVG00000002430	-	77	31.229	ENSLAFG00000031124	PATL2	54	31.544	Loxodonta_africana
ENSCSAVG00000002430	-	77	30.872	ENSMFAG00000003565	PATL2	52	31.208	Macaca_fascicularis
ENSCSAVG00000002430	-	77	30.872	ENSMMUG00000014294	PATL2	80	31.208	Macaca_mulatta
ENSCSAVG00000002430	-	77	30.872	ENSMNEG00000034510	PATL2	52	31.208	Macaca_nemestrina
ENSCSAVG00000002430	-	77	30.872	ENSMLEG00000042248	PATL2	52	31.208	Mandrillus_leucophaeus
ENSCSAVG00000002430	-	76	31.757	ENSMAUG00000001008	Patl2	55	31.773	Mesocricetus_auratus
ENSCSAVG00000002430	-	77	30.435	ENSMICG00000005037	PATL2	80	31.438	Microcebus_murinus
ENSCSAVG00000002430	-	76	30.743	ENSMOCG00000015367	Patl2	54	30.769	Microtus_ochrogaster
ENSCSAVG00000002430	-	77	32.107	ENSMODG00000017690	PATL2	50	32.107	Monodelphis_domestica
ENSCSAVG00000002430	-	77	31.208	MGP_CAROLIEiJ_G0024205	Patl2	53	31.208	Mus_caroli
ENSCSAVG00000002430	-	77	31.879	ENSMUSG00000027233	Patl2	53	31.879	Mus_musculus
ENSCSAVG00000002430	-	76	31.864	MGP_PahariEiJ_G0025648	Patl2	53	31.879	Mus_pahari
ENSCSAVG00000002430	-	77	31.544	MGP_SPRETEiJ_G0025122	Patl2	53	31.544	Mus_spretus
ENSCSAVG00000002430	-	77	30.537	ENSNLEG00000005673	PATL2	53	30.872	Nomascus_leucogenys
ENSCSAVG00000002430	-	80	33.746	ENSOANG00000011117	-	74	33.746	Ornithorhynchus_anatinus
ENSCSAVG00000002430	-	77	31.208	ENSOARG00000003762	PATL2	53	31.208	Ovis_aries
ENSCSAVG00000002430	-	77	31.208	ENSPPAG00000007221	PATL2	52	31.208	Pan_paniscus
ENSCSAVG00000002430	-	77	31.208	ENSPTRG00000041536	PATL2	52	31.208	Pan_troglodytes
ENSCSAVG00000002430	-	77	30.872	ENSPANG00000018026	PATL2	52	31.208	Papio_anubis
ENSCSAVG00000002430	-	76	31.650	ENSPEMG00000016509	Patl2	54	31.667	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002430	-	84	31.515	ENSPCIG00000018256	PATL2	63	31.515	Phascolarctos_cinereus
ENSCSAVG00000002430	-	77	31.126	ENSPCOG00000000295	PATL2	80	31.773	Propithecus_coquereli
ENSCSAVG00000002430	-	77	31.229	ENSSBOG00000034766	PATL2	52	31.561	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002430	-	78	30.363	ENSSPUG00000019065	PATL2	81	30.363	Sphenodon_punctatus
ENSCSAVG00000002430	-	77	32.776	ENSUAMG00000018533	PATL2	52	33.110	Ursus_americanus
ENSCSAVG00000002430	-	77	32.776	ENSUMAG00000007738	PATL2	52	33.110	Ursus_maritimus
ENSCSAVG00000002430	-	77	30.872	ENSVVUG00000011576	PATL2	53	30.872	Vulpes_vulpes
ENSCSAVG00000002430	-	76	36.207	ENSXCOG00000010808	patl1	52	36.207	Xiphophorus_couchianus