EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000002472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9208 bases
Position: chrreftig_30:917588-926795
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004195	dsrm	PF00035.26	1.9e-09	1	1
ENSCSAVP00000004195	Dus	PF01207.17	3.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004258	-	1566	-	ENSCSAVP00000004195	445 (aa)	-	H2YFU7

Gene Model

Click here to download ENSCSAVG00000002472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002472	-	58	31.679	ENSCSAVG00000001475	-	56	31.679
ENSCSAVG00000002472	-	59	35.472	ENSCSAVG00000000712	-	67	35.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002472	-	98	54.091	ENSG00000167264	DUS2	97	66.883	Homo_sapiens
ENSCSAVG00000002472	-	97	52.982	ENSAPOG00000014250	dus2	85	52.982	Acanthochromis_polyacanthus
ENSCSAVG00000002472	-	57	46.124	ENSAMEG00000008115	DUS2	83	46.124	Ailuropoda_melanoleuca
ENSCSAVG00000002472	-	79	52.528	ENSAOCG00000023179	dus2	96	52.528	Amphiprion_ocellaris
ENSCSAVG00000002472	-	97	47.936	ENSAPEG00000012860	dus2	84	47.936	Amphiprion_percula
ENSCSAVG00000002472	-	97	52.294	ENSATEG00000011729	dus2	87	52.294	Anabas_testudineus
ENSCSAVG00000002472	-	98	53.881	ENSACAG00000009757	DUS2	89	53.881	Anolis_carolinensis
ENSCSAVG00000002472	-	98	54.318	ENSANAG00000023126	DUS2	88	54.318	Aotus_nancymaae
ENSCSAVG00000002472	-	97	52.982	ENSACLG00000023737	dus2	86	52.982	Astatotilapia_calliptera
ENSCSAVG00000002472	-	97	54.587	ENSAMXG00000017685	dus2	86	54.587	Astyanax_mexicanus
ENSCSAVG00000002472	-	98	54.462	ENSBTAG00000014644	DUS2	88	54.462	Bos_taurus
ENSCSAVG00000002472	-	96	40.503	WBGene00013201	dus-2	97	40.503	Caenorhabditis_elegans
ENSCSAVG00000002472	-	98	54.318	ENSCJAG00000015797	DUS2	88	54.318	Callithrix_jacchus
ENSCSAVG00000002472	-	98	54.670	ENSCAFG00000020326	DUS2	88	54.670	Canis_familiaris
ENSCSAVG00000002472	-	98	54.670	ENSCAFG00020019787	DUS2	88	54.670	Canis_lupus_dingo
ENSCSAVG00000002472	-	98	48.394	ENSCHIG00000023088	DUS2	88	48.394	Capra_hircus
ENSCSAVG00000002472	-	98	54.318	ENSTSYG00000013135	DUS2	88	54.318	Carlito_syrichta
ENSCSAVG00000002472	-	98	53.968	ENSCPOG00000013747	DUS2	88	53.968	Cavia_porcellus
ENSCSAVG00000002472	-	98	54.545	ENSCCAG00000000046	DUS2	88	54.545	Cebus_capucinus
ENSCSAVG00000002472	-	98	54.318	ENSCATG00000030756	DUS2	88	54.318	Cercocebus_atys
ENSCSAVG00000002472	-	98	54.233	ENSCLAG00000004546	DUS2	88	54.233	Chinchilla_lanigera
ENSCSAVG00000002472	-	98	54.545	ENSCSAG00000004050	DUS2	88	54.545	Chlorocebus_sabaeus
ENSCSAVG00000002472	-	52	62.581	ENSCHOG00000002632	-	54	62.581	Choloepus_hoffmanni
ENSCSAVG00000002472	-	98	51.487	ENSCPBG00000012099	DUS2	82	51.487	Chrysemys_picta_bellii
ENSCSAVG00000002472	-	98	54.091	ENSCANG00000031996	DUS2	88	54.091	Colobus_angolensis_palliatus
ENSCSAVG00000002472	-	98	53.547	ENSCGRG00001012463	Dus2	88	53.547	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002472	-	98	53.547	ENSCGRG00000008944	Dus2	88	53.547	Cricetulus_griseus_crigri
ENSCSAVG00000002472	-	97	52.860	ENSCSEG00000021697	dus2	78	52.860	Cynoglossus_semilaevis
ENSCSAVG00000002472	-	97	51.376	ENSCVAG00000022050	dus2	85	51.376	Cyprinodon_variegatus
ENSCSAVG00000002472	-	97	52.632	ENSDARG00000077607	dus2	91	65.152	Danio_rerio
ENSCSAVG00000002472	-	91	51.724	ENSDNOG00000018578	DUS2	85	51.724	Dasypus_novemcinctus
ENSCSAVG00000002472	-	91	44.059	ENSDORG00000001654	Dus2	82	44.059	Dipodomys_ordii
ENSCSAVG00000002472	-	99	45.175	FBgn0030554	CG1434	95	45.175	Drosophila_melanogaster
ENSCSAVG00000002472	-	87	43.702	ENSETEG00000005320	DUS2	99	43.702	Echinops_telfairi
ENSCSAVG00000002472	-	82	55.230	ENSEBUG00000001597	dus2	90	55.230	Eptatretus_burgeri
ENSCSAVG00000002472	-	98	52.164	ENSEASG00005020405	DUS2	88	52.164	Equus_asinus_asinus
ENSCSAVG00000002472	-	98	54.176	ENSECAG00000023209	DUS2	88	54.005	Equus_caballus
ENSCSAVG00000002472	-	76	59.245	ENSEEUG00000004923	DUS2	69	59.245	Erinaceus_europaeus
ENSCSAVG00000002472	-	97	54.233	ENSELUG00000017339	dus2	85	54.233	Esox_lucius
ENSCSAVG00000002472	-	98	53.986	ENSFCAG00000010417	DUS2	88	53.986	Felis_catus
ENSCSAVG00000002472	-	98	52.174	ENSFALG00000007759	DUS2	88	52.174	Ficedula_albicollis
ENSCSAVG00000002472	-	98	54.318	ENSFDAG00000016111	DUS2	90	54.318	Fukomys_damarensis
ENSCSAVG00000002472	-	51	42.735	ENSFHEG00000013105	dus2	67	42.735	Fundulus_heteroclitus
ENSCSAVG00000002472	-	98	49.886	ENSGMOG00000011112	dus2	91	49.886	Gadus_morhua
ENSCSAVG00000002472	-	98	52.174	ENSGALG00000048067	DUS2	88	52.174	Gallus_gallus
ENSCSAVG00000002472	-	97	52.982	ENSGAFG00000003850	dus2	85	52.982	Gambusia_affinis
ENSCSAVG00000002472	-	97	51.716	ENSGACG00000008159	dus2	89	51.716	Gasterosteus_aculeatus
ENSCSAVG00000002472	-	98	51.716	ENSGAGG00000004570	DUS2	82	51.716	Gopherus_agassizii
ENSCSAVG00000002472	-	91	51.951	ENSGGOG00000007381	DUS2	87	45.658	Gorilla_gorilla
ENSCSAVG00000002472	-	97	52.982	ENSHBUG00000020267	dus2	91	52.982	Haplochromis_burtoni
ENSCSAVG00000002472	-	98	53.776	ENSHGLG00000018885	DUS2	88	53.776	Heterocephalus_glaber_female
ENSCSAVG00000002472	-	98	53.776	ENSHGLG00100013033	DUS2	88	53.776	Heterocephalus_glaber_male
ENSCSAVG00000002472	-	97	46.380	ENSHCOG00000009462	dus2	90	46.380	Hippocampus_comes
ENSCSAVG00000002472	-	97	52.752	ENSIPUG00000023029	DUS2	86	52.752	Ictalurus_punctatus
ENSCSAVG00000002472	-	97	54.795	ENSSTOG00000002066	DUS2	88	54.795	Ictidomys_tridecemlineatus
ENSCSAVG00000002472	-	71	50.000	ENSJJAG00000000630	Dus2	74	50.000	Jaculus_jaculus
ENSCSAVG00000002472	-	64	42.955	ENSKMAG00000012644	dus2	72	42.955	Kryptolebias_marmoratus
ENSCSAVG00000002472	-	97	46.101	ENSLBEG00000005839	dus2	85	46.101	Labrus_bergylta
ENSCSAVG00000002472	-	97	51.945	ENSLACG00000005839	DUS2	90	51.945	Latimeria_chalumnae
ENSCSAVG00000002472	-	97	50.000	ENSLOCG00000008097	dus2	87	50.000	Lepisosteus_oculatus
ENSCSAVG00000002472	-	97	54.713	ENSLAFG00000014594	DUS2	88	54.713	Loxodonta_africana
ENSCSAVG00000002472	-	98	54.318	ENSMFAG00000046270	DUS2	88	54.318	Macaca_fascicularis
ENSCSAVG00000002472	-	98	54.318	ENSMMUG00000021841	DUS2	88	54.318	Macaca_mulatta
ENSCSAVG00000002472	-	98	54.318	ENSMNEG00000032376	DUS2	88	54.318	Macaca_nemestrina
ENSCSAVG00000002472	-	90	52.475	ENSMLEG00000027642	DUS2	86	52.475	Mandrillus_leucophaeus
ENSCSAVG00000002472	-	97	52.523	ENSMAMG00000013827	dus2	86	52.523	Mastacembelus_armatus
ENSCSAVG00000002472	-	97	52.982	ENSMZEG00005024219	dus2	86	52.982	Maylandia_zebra
ENSCSAVG00000002472	-	98	52.403	ENSMGAG00000004019	DUS2	88	52.403	Meleagris_gallopavo
ENSCSAVG00000002472	-	98	54.005	ENSMICG00000011354	DUS2	88	54.005	Microcebus_murinus
ENSCSAVG00000002472	-	98	53.318	ENSMOCG00000012829	Dus2	88	53.318	Microtus_ochrogaster
ENSCSAVG00000002472	-	97	48.046	ENSMMOG00000018654	dus2	90	48.046	Mola_mola
ENSCSAVG00000002472	-	98	53.968	ENSMODG00000005295	DUS2	89	53.968	Monodelphis_domestica
ENSCSAVG00000002472	-	97	48.165	ENSMALG00000015752	dus2	91	48.165	Monopterus_albus
ENSCSAVG00000002472	-	98	53.547	ENSMUSG00000031901	Dus2	88	53.547	Mus_musculus
ENSCSAVG00000002472	-	98	54.005	MGP_PahariEiJ_G0023109	Dus2	88	54.005	Mus_pahari
ENSCSAVG00000002472	-	98	53.776	MGP_SPRETEiJ_G0032627	Dus2	88	53.776	Mus_spretus
ENSCSAVG00000002472	-	98	53.986	ENSMPUG00000006925	DUS2	88	53.986	Mustela_putorius_furo
ENSCSAVG00000002472	-	98	53.864	ENSMLUG00000005904	DUS2	89	53.864	Myotis_lucifugus
ENSCSAVG00000002472	-	90	52.120	ENSNGAG00000013003	Dus2	88	52.250	Nannospalax_galili
ENSCSAVG00000002472	-	97	48.157	ENSNBRG00000018031	dus2	86	48.157	Neolamprologus_brichardi
ENSCSAVG00000002472	-	94	53.081	ENSNLEG00000005100	DUS2	85	53.081	Nomascus_leucogenys
ENSCSAVG00000002472	-	97	48.276	ENSOPRG00000013920	DUS2	88	48.276	Ochotona_princeps
ENSCSAVG00000002472	-	97	52.294	ENSONIG00000010614	dus2	91	52.294	Oreochromis_niloticus
ENSCSAVG00000002472	-	98	54.233	ENSOCUG00000010043	DUS2	88	54.233	Oryctolagus_cuniculus
ENSCSAVG00000002472	-	98	51.818	ENSORLG00000000833	dus2	87	52.164	Oryzias_latipes
ENSCSAVG00000002472	-	98	51.364	ENSORLG00020003904	dus2	87	51.708	Oryzias_latipes_hni
ENSCSAVG00000002472	-	98	51.818	ENSORLG00015018864	dus2	87	52.164	Oryzias_latipes_hsok
ENSCSAVG00000002472	-	97	53.318	ENSOMEG00000020631	dus2	86	53.440	Oryzias_melastigma
ENSCSAVG00000002472	-	91	51.724	ENSOGAG00000016897	DUS2	88	51.724	Otolemur_garnettii
ENSCSAVG00000002472	-	98	53.348	ENSOARG00000003325	DUS2	88	54.691	Ovis_aries
ENSCSAVG00000002472	-	98	54.091	ENSPPAG00000029892	DUS2	88	54.091	Pan_paniscus
ENSCSAVG00000002472	-	98	53.986	ENSPPRG00000006182	DUS2	88	53.986	Panthera_pardus
ENSCSAVG00000002472	-	98	53.986	ENSPTIG00000021168	DUS2	88	53.986	Panthera_tigris_altaica
ENSCSAVG00000002472	-	98	54.091	ENSPTRG00000008259	DUS2	88	54.091	Pan_troglodytes
ENSCSAVG00000002472	-	98	54.318	ENSPANG00000022609	DUS2	88	54.318	Papio_anubis
ENSCSAVG00000002472	-	97	50.000	ENSPKIG00000021221	dus2	86	50.000	Paramormyrops_kingsleyae
ENSCSAVG00000002472	-	98	51.259	ENSPSIG00000003478	DUS2	85	51.259	Pelodiscus_sinensis
ENSCSAVG00000002472	-	97	51.843	ENSPMGG00000022665	dus2	84	51.843	Periophthalmus_magnuspinnatus
ENSCSAVG00000002472	-	98	53.547	ENSPEMG00000016993	Dus2	88	53.547	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002472	-	53	38.525	ENSPMAG00000004695	-	86	38.525	Petromyzon_marinus
ENSCSAVG00000002472	-	98	53.776	ENSPCIG00000028064	DUS2	88	53.776	Phascolarctos_cinereus
ENSCSAVG00000002472	-	97	52.982	ENSPFOG00000000030	dus2	79	52.982	Poecilia_formosa
ENSCSAVG00000002472	-	76	51.917	ENSPLAG00000001324	dus2	78	51.917	Poecilia_latipinna
ENSCSAVG00000002472	-	97	47.005	ENSPREG00000001095	dus2	89	47.529	Poecilia_reticulata
ENSCSAVG00000002472	-	98	53.864	ENSPPYG00000007482	DUS2	88	53.864	Pongo_abelii
ENSCSAVG00000002472	-	89	53.846	ENSPCAG00000001415	DUS2	88	53.846	Procavia_capensis
ENSCSAVG00000002472	-	98	54.462	ENSPCOG00000026045	DUS2	88	54.462	Propithecus_coquereli
ENSCSAVG00000002472	-	96	51.508	ENSPVAG00000016624	DUS2	98	51.508	Pteropus_vampyrus
ENSCSAVG00000002472	-	97	52.982	ENSPNYG00000022914	dus2	86	52.982	Pundamilia_nyererei
ENSCSAVG00000002472	-	98	53.425	ENSPNAG00000030006	dus2	87	53.425	Pygocentrus_nattereri
ENSCSAVG00000002472	-	98	53.547	ENSRNOG00000019819	Dus2	88	53.547	Rattus_norvegicus
ENSCSAVG00000002472	-	98	53.864	ENSRBIG00000028682	DUS2	88	53.864	Rhinopithecus_bieti
ENSCSAVG00000002472	-	98	47.500	ENSRROG00000040280	DUS2	87	51.955	Rhinopithecus_roxellana
ENSCSAVG00000002472	-	62	38.435	YNR015W	SMM1	76	38.435	Saccharomyces_cerevisiae
ENSCSAVG00000002472	-	98	46.364	ENSSBOG00000028381	DUS2	87	46.364	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002472	-	98	53.075	ENSSHAG00000009332	DUS2	89	53.075	Sarcophilus_harrisii
ENSCSAVG00000002472	-	98	51.481	ENSSFOG00015010105	dus2	87	51.481	Scleropages_formosus
ENSCSAVG00000002472	-	97	52.064	ENSSMAG00000000641	dus2	86	52.064	Scophthalmus_maximus
ENSCSAVG00000002472	-	97	51.835	ENSSDUG00000017399	dus2	87	51.835	Seriola_dumerili
ENSCSAVG00000002472	-	97	51.835	ENSSLDG00000000751	dus2	87	51.835	Seriola_lalandi_dorsalis
ENSCSAVG00000002472	-	86	47.150	ENSSARG00000014170	DUS2	88	47.150	Sorex_araneus
ENSCSAVG00000002472	-	97	52.283	ENSSPUG00000012818	DUS2	88	52.283	Sphenodon_punctatus
ENSCSAVG00000002472	-	97	48.526	ENSSPAG00000003814	dus2	88	51.825	Stegastes_partitus
ENSCSAVG00000002472	-	98	54.920	ENSSSCG00000022098	DUS2	88	54.920	Sus_scrofa
ENSCSAVG00000002472	-	98	52.955	ENSTGUG00000007016	DUS2	96	52.860	Taeniopygia_guttata
ENSCSAVG00000002472	-	97	52.982	ENSTRUG00000022441	dus2	84	52.982	Takifugu_rubripes
ENSCSAVG00000002472	-	97	47.178	ENSTNIG00000005616	dus2	92	47.178	Tetraodon_nigroviridis
ENSCSAVG00000002472	-	98	51.716	ENSTBEG00000006443	DUS2	88	51.716	Tupaia_belangeri
ENSCSAVG00000002472	-	92	46.829	ENSTTRG00000014610	DUS2	99	46.829	Tursiops_truncatus
ENSCSAVG00000002472	-	98	53.273	ENSUAMG00000016114	DUS2	88	53.273	Ursus_americanus
ENSCSAVG00000002472	-	98	53.499	ENSUMAG00000019192	DUS2	88	53.499	Ursus_maritimus
ENSCSAVG00000002472	-	97	51.382	ENSVPAG00000002580	DUS2	88	51.382	Vicugna_pacos
ENSCSAVG00000002472	-	98	54.214	ENSVVUG00000012887	DUS2	88	54.214	Vulpes_vulpes
ENSCSAVG00000002472	-	98	51.584	ENSXETG00000005436	dus2	89	51.584	Xenopus_tropicalis
ENSCSAVG00000002472	-	97	52.294	ENSXCOG00000000879	dus2	89	52.294	Xiphophorus_couchianus
ENSCSAVG00000002472	-	97	52.294	ENSXMAG00000012268	dus2	85	52.294	Xiphophorus_maculatus