EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4748 bases
Position: chrreftig_106:367034-371781
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004202	SpoU_sub_bind	PF08032.12	4.7e-10	1	1
ENSCSAVP00000004202	SpoU_methylase	PF00588.19	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004265	-	980	-	ENSCSAVP00000004202	228 (aa)	-	H2YFV4

Gene Model

Click here to download ENSCSAVG00000002478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002478	-	78	35.519	ENSAPLG00000006433	MRM1	57	37.158	Anas_platyrhynchos
ENSCSAVG00000002478	-	71	35.928	ENSACAG00000002573	MRM1	50	35.928	Anolis_carolinensis
ENSCSAVG00000002478	-	69	37.037	ENSACLG00000023745	mrm1	51	37.037	Astatotilapia_calliptera
ENSCSAVG00000002478	-	52	38.333	ENSCPOG00000004283	MRM1	52	31.746	Cavia_porcellus
ENSCSAVG00000002478	-	52	37.903	ENSETEG00000000378	MRM1	63	34.503	Echinops_telfairi
ENSCSAVG00000002478	-	82	32.632	ENSEASG00005002123	MRM1	52	32.632	Equus_asinus_asinus
ENSCSAVG00000002478	-	82	32.105	ENSECAG00000025139	MRM1	52	32.105	Equus_caballus
ENSCSAVG00000002478	-	52	38.710	ENSEEUG00000013434	-	72	36.310	Erinaceus_europaeus
ENSCSAVG00000002478	-	68	37.423	ENSGALG00000039523	MRM1	61	37.423	Gallus_gallus
ENSCSAVG00000002478	-	69	36.478	ENSGACG00000004024	mrm1	58	36.478	Gasterosteus_aculeatus
ENSCSAVG00000002478	-	69	36.420	ENSHBUG00000004484	mrm1	51	36.420	Haplochromis_burtoni
ENSCSAVG00000002478	-	52	36.975	ENSSTOG00000002422	MRM1	54	31.016	Ictidomys_tridecemlineatus
ENSCSAVG00000002478	-	70	34.756	ENSJJAG00000010068	Mrm1	52	34.756	Jaculus_jaculus
ENSCSAVG00000002478	-	72	36.257	ENSLBEG00000009581	mrm1	53	36.257	Labrus_bergylta
ENSCSAVG00000002478	-	70	32.716	ENSLACG00000017664	MRM1	54	32.716	Latimeria_chalumnae
ENSCSAVG00000002478	-	79	32.796	ENSLOCG00000004945	mrm1	56	32.796	Lepisosteus_oculatus
ENSCSAVG00000002478	-	70	38.750	ENSMAMG00000007018	mrm1	51	38.750	Mastacembelus_armatus
ENSCSAVG00000002478	-	69	37.037	ENSMZEG00005008320	mrm1	51	37.037	Maylandia_zebra
ENSCSAVG00000002478	-	69	37.037	ENSNBRG00000023533	mrm1	51	37.037	Neolamprologus_brichardi
ENSCSAVG00000002478	-	52	41.176	ENSOPRG00000012866	MRM1	56	32.828	Ochotona_princeps
ENSCSAVG00000002478	-	69	37.037	ENSONIG00000021236	mrm1	52	37.267	Oreochromis_niloticus
ENSCSAVG00000002478	-	52	40.833	ENSOCUG00000012149	MRM1	54	31.884	Oryctolagus_cuniculus
ENSCSAVG00000002478	-	76	36.723	ENSORLG00000025876	mrm1	56	36.723	Oryzias_latipes
ENSCSAVG00000002478	-	76	36.158	ENSORLG00020021701	mrm1	56	36.158	Oryzias_latipes_hni
ENSCSAVG00000002478	-	76	38.418	ENSORLG00015020702	mrm1	56	38.418	Oryzias_latipes_hsok
ENSCSAVG00000002478	-	76	37.288	ENSOMEG00000003504	mrm1	56	37.288	Oryzias_melastigma
ENSCSAVG00000002478	-	72	34.940	ENSOGAG00000013785	MRM1	51	34.940	Otolemur_garnettii
ENSCSAVG00000002478	-	54	37.097	ENSPTIG00000009829	MRM1	56	33.537	Panthera_tigris_altaica
ENSCSAVG00000002478	-	73	34.302	ENSPSIG00000017622	MRM1	59	34.302	Pelodiscus_sinensis
ENSCSAVG00000002478	-	93	34.375	ENSPMGG00000003905	mrm1	61	34.375	Periophthalmus_magnuspinnatus
ENSCSAVG00000002478	-	72	33.523	ENSPMAG00000000484	mrm1	80	33.523	Petromyzon_marinus
ENSCSAVG00000002478	-	93	31.628	ENSPCOG00000020871	MRM1	59	31.628	Propithecus_coquereli
ENSCSAVG00000002478	-	69	35.849	ENSPNYG00000000528	mrm1	51	37.037	Pundamilia_nyererei
ENSCSAVG00000002478	-	99	30.837	ENSRBIG00000040494	MRM1	59	30.837	Rhinopithecus_bieti
ENSCSAVG00000002478	-	99	30.837	ENSRROG00000041704	MRM1	60	30.837	Rhinopithecus_roxellana
ENSCSAVG00000002478	-	69	37.975	ENSSMAG00000009657	mrm1	50	37.975	Scophthalmus_maximus
ENSCSAVG00000002478	-	78	36.082	ENSSLDG00000024141	mrm1	51	36.082	Seriola_lalandi_dorsalis
ENSCSAVG00000002478	-	89	31.905	ENSSPUG00000000265	MRM1	52	31.905	Sphenodon_punctatus
ENSCSAVG00000002478	-	70	34.118	ENSTBEG00000007237	-	74	34.118	Tupaia_belangeri
ENSCSAVG00000002478	-	52	38.655	ENSUAMG00000023152	MRM1	50	34.783	Ursus_americanus