EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002533 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4249 bases
Position: chrreftig_98:343848-348096
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004282	MTS	PF05175.14	6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004346	-	549	-	ENSCSAVP00000004283	183 (aa)	-	H2YG34
ENSCSAVT00000004345	-	660	-	ENSCSAVP00000004282	220 (aa)	-	H2YG33

Gene Model

Click here to download ENSCSAVG00000002533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002533	-	93	54.327	ENSG00000156239	N6AMT1	96	54.327	Homo_sapiens
ENSCSAVG00000002533	-	94	51.196	ENSAPOG00000009868	n6amt1	96	51.196	Acanthochromis_polyacanthus
ENSCSAVG00000002533	-	95	52.558	ENSAMEG00000008279	N6AMT1	99	52.558	Ailuropoda_melanoleuca
ENSCSAVG00000002533	-	95	50.711	ENSACIG00000017021	n6amt1	97	50.711	Amphilophus_citrinellus
ENSCSAVG00000002533	-	94	43.062	ENSAOCG00000002525	n6amt1	96	43.062	Amphiprion_ocellaris
ENSCSAVG00000002533	-	94	51.196	ENSAPEG00000015144	n6amt1	96	51.196	Amphiprion_percula
ENSCSAVG00000002533	-	94	51.196	ENSATEG00000017766	n6amt1	87	51.196	Anabas_testudineus
ENSCSAVG00000002533	-	76	53.293	ENSAPLG00000003868	N6AMT1	99	53.293	Anas_platyrhynchos
ENSCSAVG00000002533	-	75	53.012	ENSACAG00000001341	N6AMT1	77	53.012	Anolis_carolinensis
ENSCSAVG00000002533	-	68	49.673	ENSANAG00000024312	-	94	49.673	Aotus_nancymaae
ENSCSAVG00000002533	-	96	42.793	ENSANAG00000032017	N6AMT1	99	42.793	Aotus_nancymaae
ENSCSAVG00000002533	-	99	49.550	ENSACLG00000024678	n6amt1	88	49.550	Astatotilapia_calliptera
ENSCSAVG00000002533	-	94	53.333	ENSAMXG00000029868	n6amt1	98	53.333	Astyanax_mexicanus
ENSCSAVG00000002533	-	94	53.589	ENSBTAG00000001412	N6AMT1	80	53.589	Bos_taurus
ENSCSAVG00000002533	-	95	44.601	WBGene00016341	mtq-2	94	44.601	Caenorhabditis_elegans
ENSCSAVG00000002533	-	95	52.113	ENSCJAG00000047026	N6AMT1	99	52.113	Callithrix_jacchus
ENSCSAVG00000002533	-	65	56.338	ENSCAFG00000030996	N6AMT1	60	56.338	Canis_familiaris
ENSCSAVG00000002533	-	94	52.381	ENSCAFG00020026293	N6AMT1	97	52.381	Canis_lupus_dingo
ENSCSAVG00000002533	-	94	53.110	ENSCHIG00000016325	N6AMT1	97	53.110	Capra_hircus
ENSCSAVG00000002533	-	94	52.381	ENSTSYG00000004325	N6AMT1	97	52.381	Carlito_syrichta
ENSCSAVG00000002533	-	93	53.846	ENSCPOG00000030645	N6AMT1	96	53.846	Cavia_porcellus
ENSCSAVG00000002533	-	95	52.582	ENSCCAG00000033809	N6AMT1	99	52.582	Cebus_capucinus
ENSCSAVG00000002533	-	74	51.190	ENSCATG00000030066	-	93	51.190	Cercocebus_atys
ENSCSAVG00000002533	-	94	53.110	ENSCLAG00000009758	N6AMT1	95	53.110	Chinchilla_lanigera
ENSCSAVG00000002533	-	95	53.521	ENSCSAG00000009113	N6AMT1	99	53.521	Chlorocebus_sabaeus
ENSCSAVG00000002533	-	95	48.131	ENSCSAG00000003461	-	99	48.131	Chlorocebus_sabaeus
ENSCSAVG00000002533	-	95	50.704	ENSCHOG00000005227	N6AMT1	99	50.704	Choloepus_hoffmanni
ENSCSAVG00000002533	-	79	55.747	ENSCPBG00000006708	N6AMT1	99	55.747	Chrysemys_picta_bellii
ENSCSAVG00000002533	-	95	46.009	ENSCANG00000034907	-	98	46.009	Colobus_angolensis_palliatus
ENSCSAVG00000002533	-	94	52.381	ENSCGRG00001012196	N6amt1	97	52.381	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002533	-	94	51.905	ENSCGRG00000014832	N6amt1	97	51.905	Cricetulus_griseus_crigri
ENSCSAVG00000002533	-	93	50.962	ENSCSEG00000004007	n6amt1	96	50.962	Cynoglossus_semilaevis
ENSCSAVG00000002533	-	94	51.429	ENSCVAG00000015389	n6amt1	93	51.429	Cyprinodon_variegatus
ENSCSAVG00000002533	-	94	51.675	ENSDARG00000115421	n6amt1	95	51.675	Danio_rerio
ENSCSAVG00000002533	-	94	53.333	ENSDNOG00000002069	N6AMT1	97	53.333	Dasypus_novemcinctus
ENSCSAVG00000002533	-	94	53.589	ENSDORG00000028667	N6amt1	97	53.589	Dipodomys_ordii
ENSCSAVG00000002533	-	94	41.892	FBgn0031454	CG9960	98	41.892	Drosophila_melanogaster
ENSCSAVG00000002533	-	95	37.559	ENSETEG00000017725	N6AMT1	99	37.559	Echinops_telfairi
ENSCSAVG00000002533	-	89	51.795	ENSEBUG00000007863	n6amt1	88	51.795	Eptatretus_burgeri
ENSCSAVG00000002533	-	99	52.703	ENSEASG00005008146	N6AMT1	94	52.466	Equus_asinus_asinus
ENSCSAVG00000002533	-	99	52.703	ENSECAG00000009080	N6AMT1	94	52.466	Equus_caballus
ENSCSAVG00000002533	-	94	54.545	ENSEEUG00000013787	N6AMT1	97	54.545	Erinaceus_europaeus
ENSCSAVG00000002533	-	94	52.381	ENSELUG00000001748	n6amt1	99	52.381	Esox_lucius
ENSCSAVG00000002533	-	94	52.381	ENSFCAG00000013161	N6AMT1	95	52.381	Felis_catus
ENSCSAVG00000002533	-	95	53.738	ENSFALG00000001717	N6AMT1	99	53.738	Ficedula_albicollis
ENSCSAVG00000002533	-	94	52.153	ENSFDAG00000012916	-	97	52.153	Fukomys_damarensis
ENSCSAVG00000002533	-	94	51.905	ENSFHEG00000018883	n6amt1	96	51.905	Fundulus_heteroclitus
ENSCSAVG00000002533	-	78	54.598	ENSGMOG00000000902	n6amt1	100	54.598	Gadus_morhua
ENSCSAVG00000002533	-	93	54.067	ENSGALG00000015802	N6AMT1	96	54.067	Gallus_gallus
ENSCSAVG00000002533	-	85	53.403	ENSGAFG00000019817	n6amt1	98	54.011	Gambusia_affinis
ENSCSAVG00000002533	-	94	50.718	ENSGACG00000014248	n6amt1	99	50.718	Gasterosteus_aculeatus
ENSCSAVG00000002533	-	94	54.976	ENSGAGG00000024117	N6AMT1	84	54.976	Gopherus_agassizii
ENSCSAVG00000002533	-	91	46.766	ENSGGOG00000008382	-	94	46.766	Gorilla_gorilla
ENSCSAVG00000002533	-	93	54.327	ENSGGOG00000022382	N6AMT1	96	54.327	Gorilla_gorilla
ENSCSAVG00000002533	-	95	50.704	ENSHBUG00000002644	n6amt1	98	50.704	Haplochromis_burtoni
ENSCSAVG00000002533	-	94	52.632	ENSHGLG00000016904	N6AMT1	97	52.632	Heterocephalus_glaber_female
ENSCSAVG00000002533	-	94	52.632	ENSHGLG00100008400	N6AMT1	97	52.632	Heterocephalus_glaber_male
ENSCSAVG00000002533	-	93	52.657	ENSHCOG00000006177	n6amt1	95	52.657	Hippocampus_comes
ENSCSAVG00000002533	-	94	52.381	ENSIPUG00000009452	n6amt1	88	52.381	Ictalurus_punctatus
ENSCSAVG00000002533	-	95	52.582	ENSSTOG00000021743	N6AMT1	99	52.582	Ictidomys_tridecemlineatus
ENSCSAVG00000002533	-	94	53.589	ENSJJAG00000001593	N6amt1	97	53.589	Jaculus_jaculus
ENSCSAVG00000002533	-	94	51.905	ENSKMAG00000000880	n6amt1	97	51.659	Kryptolebias_marmoratus
ENSCSAVG00000002533	-	94	51.429	ENSLBEG00000027051	n6amt1	98	51.429	Labrus_bergylta
ENSCSAVG00000002533	-	94	51.675	ENSLACG00000006042	N6AMT1	96	51.675	Latimeria_chalumnae
ENSCSAVG00000002533	-	95	50.237	ENSLOCG00000010815	n6amt1	99	50.237	Lepisosteus_oculatus
ENSCSAVG00000002533	-	94	53.110	ENSLAFG00000001451	N6AMT1	97	53.110	Loxodonta_africana
ENSCSAVG00000002533	-	95	42.254	ENSMFAG00000030722	-	98	42.254	Macaca_fascicularis
ENSCSAVG00000002533	-	95	53.521	ENSMFAG00000032851	N6AMT1	99	53.521	Macaca_fascicularis
ENSCSAVG00000002533	-	95	53.991	ENSMMUG00000015726	N6AMT1	99	53.991	Macaca_mulatta
ENSCSAVG00000002533	-	95	42.254	ENSMMUG00000044515	-	98	42.254	Macaca_mulatta
ENSCSAVG00000002533	-	95	53.521	ENSMNEG00000031541	N6AMT1	99	53.521	Macaca_nemestrina
ENSCSAVG00000002533	-	95	42.254	ENSMNEG00000042890	-	98	42.254	Macaca_nemestrina
ENSCSAVG00000002533	-	95	53.521	ENSMLEG00000034650	N6AMT1	99	53.521	Mandrillus_leucophaeus
ENSCSAVG00000002533	-	94	48.571	ENSMAMG00000022339	n6amt1	97	48.571	Mastacembelus_armatus
ENSCSAVG00000002533	-	95	50.704	ENSMZEG00005017792	n6amt1	98	50.704	Maylandia_zebra
ENSCSAVG00000002533	-	94	53.555	ENSMGAG00000014501	N6AMT1	97	53.555	Meleagris_gallopavo
ENSCSAVG00000002533	-	94	45.714	ENSMAUG00000007604	N6amt1	97	45.714	Mesocricetus_auratus
ENSCSAVG00000002533	-	94	52.857	ENSMICG00000045182	N6AMT1	97	52.857	Microcebus_murinus
ENSCSAVG00000002533	-	94	51.429	ENSMOCG00000001686	N6amt1	98	51.185	Microtus_ochrogaster
ENSCSAVG00000002533	-	59	53.383	ENSMMOG00000019494	-	88	53.383	Mola_mola
ENSCSAVG00000002533	-	96	51.402	ENSMMOG00000010286	n6amt1	99	51.402	Mola_mola
ENSCSAVG00000002533	-	80	55.618	ENSMODG00000020997	N6AMT1	84	55.618	Monodelphis_domestica
ENSCSAVG00000002533	-	94	50.239	ENSMALG00000016738	n6amt1	96	50.239	Monopterus_albus
ENSCSAVG00000002533	-	94	52.857	MGP_CAROLIEiJ_G0020896	N6amt1	98	52.607	Mus_caroli
ENSCSAVG00000002533	-	94	52.381	ENSMUSG00000044442	N6amt1	96	57.386	Mus_musculus
ENSCSAVG00000002533	-	95	52.607	MGP_PahariEiJ_G0016600	N6amt1	98	52.607	Mus_pahari
ENSCSAVG00000002533	-	94	52.857	MGP_SPRETEiJ_G0021802	N6amt1	96	57.955	Mus_spretus
ENSCSAVG00000002533	-	94	52.381	ENSMPUG00000001030	N6AMT1	97	52.381	Mustela_putorius_furo
ENSCSAVG00000002533	-	94	50.000	ENSMLUG00000016771	N6AMT1	97	52.381	Myotis_lucifugus
ENSCSAVG00000002533	-	94	53.110	ENSNGAG00000018091	N6amt1	94	53.110	Nannospalax_galili
ENSCSAVG00000002533	-	95	50.704	ENSNBRG00000003897	n6amt1	98	50.704	Neolamprologus_brichardi
ENSCSAVG00000002533	-	94	54.545	ENSNLEG00000002845	N6AMT1	97	54.545	Nomascus_leucogenys
ENSCSAVG00000002533	-	92	52.913	ENSMEUG00000008047	N6AMT1	96	52.913	Notamacropus_eugenii
ENSCSAVG00000002533	-	94	52.381	ENSOPRG00000001551	N6AMT1	97	52.381	Ochotona_princeps
ENSCSAVG00000002533	-	75	51.807	ENSODEG00000002664	N6AMT1	92	51.807	Octodon_degus
ENSCSAVG00000002533	-	95	50.704	ENSONIG00000001882	n6amt1	98	50.704	Oreochromis_niloticus
ENSCSAVG00000002533	-	94	53.589	ENSOCUG00000001084	N6AMT1	97	54.286	Oryctolagus_cuniculus
ENSCSAVG00000002533	-	96	49.065	ENSORLG00000005038	n6amt1	98	49.065	Oryzias_latipes
ENSCSAVG00000002533	-	94	49.048	ENSORLG00020017088	n6amt1	96	49.048	Oryzias_latipes_hni
ENSCSAVG00000002533	-	94	49.048	ENSORLG00015015298	n6amt1	91	49.048	Oryzias_latipes_hsok
ENSCSAVG00000002533	-	94	49.524	ENSOMEG00000006621	n6amt1	96	49.524	Oryzias_melastigma
ENSCSAVG00000002533	-	94	49.048	ENSOGAG00000011265	N6AMT1	98	48.815	Otolemur_garnettii
ENSCSAVG00000002533	-	94	52.632	ENSOARG00000014732	N6AMT1	90	52.632	Ovis_aries
ENSCSAVG00000002533	-	93	52.404	ENSPPAG00000034453	N6AMT1	96	54.808	Pan_paniscus
ENSCSAVG00000002533	-	91	48.259	ENSPPAG00000000088	-	95	48.259	Pan_paniscus
ENSCSAVG00000002533	-	94	52.857	ENSPPRG00000023712	N6AMT1	95	52.857	Panthera_pardus
ENSCSAVG00000002533	-	94	52.381	ENSPTIG00000020361	N6AMT1	95	52.381	Panthera_tigris_altaica
ENSCSAVG00000002533	-	93	52.404	ENSPTRG00000013817	N6AMT1	96	54.808	Pan_troglodytes
ENSCSAVG00000002533	-	91	47.761	ENSPTRG00000048746	-	95	47.761	Pan_troglodytes
ENSCSAVG00000002533	-	95	53.081	ENSPKIG00000010822	n6amt1	99	53.081	Paramormyrops_kingsleyae
ENSCSAVG00000002533	-	95	51.185	ENSPMGG00000023630	n6amt1	97	51.185	Periophthalmus_magnuspinnatus
ENSCSAVG00000002533	-	94	51.905	ENSPEMG00000021354	N6amt1	97	51.905	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002533	-	92	52.913	ENSPCIG00000014183	N6AMT1	93	52.913	Phascolarctos_cinereus
ENSCSAVG00000002533	-	95	51.643	ENSPFOG00000002291	n6amt1	98	51.643	Poecilia_formosa
ENSCSAVG00000002533	-	95	51.643	ENSPLAG00000002780	n6amt1	98	51.643	Poecilia_latipinna
ENSCSAVG00000002533	-	95	51.643	ENSPMEG00000015678	n6amt1	98	51.643	Poecilia_mexicana
ENSCSAVG00000002533	-	95	51.643	ENSPREG00000006451	n6amt1	98	51.643	Poecilia_reticulata
ENSCSAVG00000002533	-	94	54.545	ENSPPYG00000011314	N6AMT1	97	54.545	Pongo_abelii
ENSCSAVG00000002533	-	95	44.601	ENSPCOG00000027720	N6AMT1	98	44.601	Propithecus_coquereli
ENSCSAVG00000002533	-	95	50.704	ENSPNYG00000022936	n6amt1	98	50.704	Pundamilia_nyererei
ENSCSAVG00000002533	-	94	52.381	ENSPNAG00000010171	n6amt1	97	52.381	Pygocentrus_nattereri
ENSCSAVG00000002533	-	94	52.381	ENSRNOG00000001603	N6amt1	97	52.381	Rattus_norvegicus
ENSCSAVG00000002533	-	95	44.601	ENSRBIG00000034221	-	99	44.601	Rhinopithecus_bieti
ENSCSAVG00000002533	-	95	45.540	ENSRBIG00000042168	-	99	45.540	Rhinopithecus_bieti
ENSCSAVG00000002533	-	95	52.113	ENSRBIG00000026227	N6AMT1	99	52.113	Rhinopithecus_bieti
ENSCSAVG00000002533	-	94	41.627	ENSRROG00000043758	-	96	41.627	Rhinopithecus_roxellana
ENSCSAVG00000002533	-	95	53.052	ENSRROG00000027843	N6AMT1	99	53.052	Rhinopithecus_roxellana
ENSCSAVG00000002533	-	94	34.222	YDR140W	-	99	34.222	Saccharomyces_cerevisiae
ENSCSAVG00000002533	-	95	53.052	ENSSBOG00000011411	N6AMT1	99	53.052	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002533	-	94	52.857	ENSSFOG00015009049	n6amt1	99	52.857	Scleropages_formosus
ENSCSAVG00000002533	-	94	49.048	ENSSMAG00000015250	n6amt1	97	49.048	Scophthalmus_maximus
ENSCSAVG00000002533	-	94	50.239	ENSSDUG00000005324	n6amt1	96	50.239	Seriola_dumerili
ENSCSAVG00000002533	-	94	50.239	ENSSLDG00000013280	n6amt1	96	50.239	Seriola_lalandi_dorsalis
ENSCSAVG00000002533	-	94	53.081	ENSSPUG00000011186	N6AMT1	97	53.081	Sphenodon_punctatus
ENSCSAVG00000002533	-	95	51.185	ENSSPAG00000005551	n6amt1	97	51.185	Stegastes_partitus
ENSCSAVG00000002533	-	92	53.171	ENSSSCG00000028724	-	93	53.171	Sus_scrofa
ENSCSAVG00000002533	-	95	53.521	ENSTGUG00000013486	N6AMT1	98	53.521	Taeniopygia_guttata
ENSCSAVG00000002533	-	95	44.131	ENSTRUG00000013586	n6amt1	99	44.131	Takifugu_rubripes
ENSCSAVG00000002533	-	96	51.402	ENSTNIG00000008309	n6amt1	99	51.402	Tetraodon_nigroviridis
ENSCSAVG00000002533	-	94	53.589	ENSTBEG00000001269	N6AMT1	97	53.589	Tupaia_belangeri
ENSCSAVG00000002533	-	93	52.885	ENSUAMG00000012833	N6AMT1	96	52.885	Ursus_americanus
ENSCSAVG00000002533	-	86	52.850	ENSUMAG00000014907	N6AMT1	87	52.850	Ursus_maritimus
ENSCSAVG00000002533	-	94	53.333	ENSVPAG00000012406	N6AMT1	97	53.333	Vicugna_pacos
ENSCSAVG00000002533	-	94	52.857	ENSVVUG00000009460	N6AMT1	97	52.857	Vulpes_vulpes
ENSCSAVG00000002533	-	94	52.153	ENSXMAG00000002875	n6amt1	85	51.163	Xiphophorus_maculatus