EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000002537 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1519 bases
Position: chrreftig_382:749223-750741
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004287	RVT_1	PF00078.27	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004350	-	1383	-	ENSCSAVP00000004287	461 (aa)	-	H2YG38

Gene Model

Click here to download ENSCSAVG00000002537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002537	-	100	78.252	ENSCSAVG00000005792	-	60	78.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002537	-	50	30.769	ENSBTAG00000053941	-	68	30.769	Bos_taurus
ENSCSAVG00000002537	-	58	36.397	ENSBTAG00000053762	-	56	36.397	Bos_taurus
ENSCSAVG00000002537	-	51	34.599	ENSBTAG00000053778	-	53	34.599	Bos_taurus
ENSCSAVG00000002537	-	98	34.737	ENSLOCG00000011035	-	56	34.737	Lepisosteus_oculatus
ENSCSAVG00000002537	-	99	34.570	ENSLOCG00000009450	-	72	34.570	Lepisosteus_oculatus
ENSCSAVG00000002537	-	99	33.531	ENSLOCG00000009478	-	66	33.531	Lepisosteus_oculatus