EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002555 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 8471 bases
Position: chrreftig_143:1489632-1498102
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004314	RRP7	PF12923.7	1.3e-31	1	1
ENSCSAVP00000004314	RRM_1	PF00076.22	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004378	-	961	-	ENSCSAVP00000004314	260 (aa)	-	H2YG65

Gene Model

Click here to download ENSCSAVG00000002555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002555	-	90	42.616	ENSG00000189306	RRP7A	81	42.616	Homo_sapiens
ENSCSAVG00000002555	-	85	35.217	ENSAPOG00000021250	rrp7a	84	35.217	Acanthochromis_polyacanthus
ENSCSAVG00000002555	-	90	41.772	ENSAMEG00000009503	RRP7A	81	41.772	Ailuropoda_melanoleuca
ENSCSAVG00000002555	-	85	34.914	ENSACIG00000023067	rrp7a	80	34.914	Amphilophus_citrinellus
ENSCSAVG00000002555	-	86	36.481	ENSAOCG00000004115	rrp7a	80	36.481	Amphiprion_ocellaris
ENSCSAVG00000002555	-	86	36.052	ENSAPEG00000013688	rrp7a	84	36.052	Amphiprion_percula
ENSCSAVG00000002555	-	86	35.652	ENSATEG00000009664	rrp7a	80	35.652	Anabas_testudineus
ENSCSAVG00000002555	-	85	41.964	ENSACAG00000003579	RRP7A	80	42.544	Anolis_carolinensis
ENSCSAVG00000002555	-	90	43.038	ENSANAG00000031200	RRP7A	81	43.038	Aotus_nancymaae
ENSCSAVG00000002555	-	86	38.034	ENSACLG00000016790	rrp7a	80	38.034	Astatotilapia_calliptera
ENSCSAVG00000002555	-	85	35.965	ENSAMXG00000007921	rrp7a	76	35.965	Astyanax_mexicanus
ENSCSAVG00000002555	-	85	43.556	ENSBTAG00000016510	RRP7A	88	40.157	Bos_taurus
ENSCSAVG00000002555	-	90	42.437	ENSCJAG00000009668	RRP7A	81	42.437	Callithrix_jacchus
ENSCSAVG00000002555	-	90	41.772	ENSCAFG00000000965	RRP7	81	41.772	Canis_familiaris
ENSCSAVG00000002555	-	90	41.772	ENSCAFG00020000251	RRP7A	81	41.772	Canis_lupus_dingo
ENSCSAVG00000002555	-	90	42.616	ENSCHIG00000026787	RRP7A	81	42.616	Capra_hircus
ENSCSAVG00000002555	-	90	41.597	ENSTSYG00000000198	RRP7A	81	41.597	Carlito_syrichta
ENSCSAVG00000002555	-	90	41.597	ENSCAPG00000002325	RRP7A	88	41.423	Cavia_aperea
ENSCSAVG00000002555	-	90	41.423	ENSCPOG00000030547	RRP7A	82	41.423	Cavia_porcellus
ENSCSAVG00000002555	-	85	41.256	ENSCCAG00000021486	RRP7A	93	41.256	Cebus_capucinus
ENSCSAVG00000002555	-	90	42.259	ENSCLAG00000016715	RRP7A	82	42.259	Chinchilla_lanigera
ENSCSAVG00000002555	-	90	43.038	ENSCSAG00000005657	RRP7A	81	43.038	Chlorocebus_sabaeus
ENSCSAVG00000002555	-	85	44.444	ENSCPBG00000021814	RRP7A	80	44.444	Chrysemys_picta_bellii
ENSCSAVG00000002555	-	89	38.889	ENSCGRG00001005713	-	99	38.889	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002555	-	89	42.308	ENSCGRG00000009567	-	80	42.308	Cricetulus_griseus_crigri
ENSCSAVG00000002555	-	89	38.889	ENSCGRG00000000552	-	81	38.889	Cricetulus_griseus_crigri
ENSCSAVG00000002555	-	89	37.607	ENSCGRG00000000540	-	89	37.607	Cricetulus_griseus_crigri
ENSCSAVG00000002555	-	86	36.364	ENSCSEG00000007185	rrp7a	80	36.797	Cynoglossus_semilaevis
ENSCSAVG00000002555	-	98	31.047	ENSCVAG00000004349	rrp7a	93	32.472	Cyprinodon_variegatus
ENSCSAVG00000002555	-	98	31.203	ENSDARG00000098934	rrp7a	94	31.203	Danio_rerio
ENSCSAVG00000002555	-	90	43.038	ENSDNOG00000037442	RRP7A	75	43.038	Dasypus_novemcinctus
ENSCSAVG00000002555	-	87	43.478	ENSDORG00000016138	Rrp7a	80	43.478	Dipodomys_ordii
ENSCSAVG00000002555	-	92	33.200	FBgn0031764	CG9107	92	33.200	Drosophila_melanogaster
ENSCSAVG00000002555	-	90	40.084	ENSETEG00000018025	RRP7A	89	40.084	Echinops_telfairi
ENSCSAVG00000002555	-	86	41.256	ENSEBUG00000010231	rrp7a	77	41.256	Eptatretus_burgeri
ENSCSAVG00000002555	-	90	42.194	ENSEASG00005000804	RRP7A	81	42.194	Equus_asinus_asinus
ENSCSAVG00000002555	-	90	41.772	ENSECAG00000015168	RRP7	81	41.772	Equus_caballus
ENSCSAVG00000002555	-	86	35.931	ENSELUG00000009036	rrp7a	90	33.463	Esox_lucius
ENSCSAVG00000002555	-	90	40.336	ENSFCAG00000033258	RRP7A	64	40.336	Felis_catus
ENSCSAVG00000002555	-	85	43.946	ENSFALG00000011635	RRP7A	75	43.946	Ficedula_albicollis
ENSCSAVG00000002555	-	90	43.038	ENSFDAG00000001321	RRP7A	82	43.038	Fukomys_damarensis
ENSCSAVG00000002555	-	86	34.177	ENSFHEG00000006098	rrp7a	77	35.931	Fundulus_heteroclitus
ENSCSAVG00000002555	-	86	33.624	ENSGMOG00000006218	rrp7a	84	36.245	Gadus_morhua
ENSCSAVG00000002555	-	90	40.851	ENSGALG00000011866	RRP7A	84	40.851	Gallus_gallus
ENSCSAVG00000002555	-	92	32.031	ENSGAFG00000017459	rrp7a	88	32.031	Gambusia_affinis
ENSCSAVG00000002555	-	85	33.921	ENSGACG00000007212	rrp7a	84	33.921	Gasterosteus_aculeatus
ENSCSAVG00000002555	-	85	44.690	ENSGAGG00000014621	RRP7A	80	44.690	Gopherus_agassizii
ENSCSAVG00000002555	-	90	42.308	ENSGGOG00000014957	RRP7A	81	42.308	Gorilla_gorilla
ENSCSAVG00000002555	-	86	38.034	ENSHBUG00000021788	rrp7a	80	38.034	Haplochromis_burtoni
ENSCSAVG00000002555	-	90	41.841	ENSHGLG00000015706	RRP7A	81	41.841	Heterocephalus_glaber_female
ENSCSAVG00000002555	-	90	39.583	ENSHGLG00100009556	-	81	39.583	Heterocephalus_glaber_male
ENSCSAVG00000002555	-	90	39.496	ENSHGLG00100008187	-	83	39.496	Heterocephalus_glaber_male
ENSCSAVG00000002555	-	85	33.186	ENSHCOG00000005813	rrp7a	69	35.242	Hippocampus_comes
ENSCSAVG00000002555	-	85	33.906	ENSIPUG00000000556	rrp7a	80	35.931	Ictalurus_punctatus
ENSCSAVG00000002555	-	89	42.373	ENSSTOG00000003111	RRP7A	81	42.373	Ictidomys_tridecemlineatus
ENSCSAVG00000002555	-	90	43.096	ENSJJAG00000019486	Rrp7a	88	41.569	Jaculus_jaculus
ENSCSAVG00000002555	-	85	33.913	ENSKMAG00000013819	rrp7a	80	33.766	Kryptolebias_marmoratus
ENSCSAVG00000002555	-	93	41.365	ENSLACG00000002670	RRP7A	91	41.667	Latimeria_chalumnae
ENSCSAVG00000002555	-	85	44.000	ENSLAFG00000012447	RRP7A	79	44.000	Loxodonta_africana
ENSCSAVG00000002555	-	90	42.194	ENSMFAG00000042855	RRP7A	81	42.194	Macaca_fascicularis
ENSCSAVG00000002555	-	81	42.991	ENSMFAG00000041664	-	78	42.991	Macaca_fascicularis
ENSCSAVG00000002555	-	90	40.506	ENSMMUG00000010193	-	87	39.200	Macaca_mulatta
ENSCSAVG00000002555	-	90	35.021	ENSMMUG00000009716	RRP7A	79	35.021	Macaca_mulatta
ENSCSAVG00000002555	-	90	42.616	ENSMNEG00000033705	RRP7A	81	42.616	Macaca_nemestrina
ENSCSAVG00000002555	-	90	38.034	ENSMLEG00000040230	RRP7A	86	38.034	Mandrillus_leucophaeus
ENSCSAVG00000002555	-	98	33.333	ENSMAMG00000009125	rrp7a	88	34.000	Mastacembelus_armatus
ENSCSAVG00000002555	-	86	38.034	ENSMZEG00005005197	rrp7a	80	38.034	Maylandia_zebra
ENSCSAVG00000002555	-	90	40.426	ENSMGAG00000011980	RRP7A	89	40.426	Meleagris_gallopavo
ENSCSAVG00000002555	-	90	42.194	ENSMICG00000041800	RRP7A	81	42.194	Microcebus_murinus
ENSCSAVG00000002555	-	85	33.190	ENSMMOG00000004976	rrp7a	80	34.483	Mola_mola
ENSCSAVG00000002555	-	93	39.535	ENSMODG00000006914	RRP7A	88	39.535	Monodelphis_domestica
ENSCSAVG00000002555	-	85	37.555	ENSMALG00000001933	rrp7a	80	37.281	Monopterus_albus
ENSCSAVG00000002555	-	85	42.222	MGP_CAROLIEiJ_G0020092	Rrp7a	79	42.035	Mus_caroli
ENSCSAVG00000002555	-	85	42.222	ENSMUSG00000018040	Rrp7a	84	53.488	Mus_musculus
ENSCSAVG00000002555	-	85	42.667	MGP_PahariEiJ_G0020099	Rrp7a	79	42.478	Mus_pahari
ENSCSAVG00000002555	-	85	42.222	MGP_SPRETEiJ_G0020990	Rrp7a	79	42.222	Mus_spretus
ENSCSAVG00000002555	-	90	40.851	ENSMPUG00000016315	RRP7A	81	40.851	Mustela_putorius_furo
ENSCSAVG00000002555	-	93	40.234	ENSMLUG00000012404	RRP7A	88	40.234	Myotis_lucifugus
ENSCSAVG00000002555	-	86	42.982	ENSNGAG00000010039	Rrp7a	79	42.982	Nannospalax_galili
ENSCSAVG00000002555	-	98	34.317	ENSNBRG00000001824	rrp7a	93	34.317	Neolamprologus_brichardi
ENSCSAVG00000002555	-	90	42.616	ENSNLEG00000036258	RRP7A	88	41.339	Nomascus_leucogenys
ENSCSAVG00000002555	-	85	42.667	ENSODEG00000015126	RRP7A	79	42.478	Octodon_degus
ENSCSAVG00000002555	-	86	37.607	ENSONIG00000008364	rrp7a	80	37.607	Oreochromis_niloticus
ENSCSAVG00000002555	-	75	38.500	ENSOANG00000015007	RRP7A	72	38.500	Ornithorhynchus_anatinus
ENSCSAVG00000002555	-	92	39.676	ENSOCUG00000027434	RRP7A	87	39.676	Oryctolagus_cuniculus
ENSCSAVG00000002555	-	86	36.638	ENSORLG00000014826	rrp7a	80	37.500	Oryzias_latipes
ENSCSAVG00000002555	-	86	36.207	ENSORLG00020006078	rrp7a	80	37.069	Oryzias_latipes_hni
ENSCSAVG00000002555	-	86	35.652	ENSORLG00015018190	rrp7a	80	35.217	Oryzias_latipes_hsok
ENSCSAVG00000002555	-	86	34.632	ENSOMEG00000007090	rrp7a	91	32.558	Oryzias_melastigma
ENSCSAVG00000002555	-	90	42.857	ENSOGAG00000002857	RRP7A	81	42.857	Otolemur_garnettii
ENSCSAVG00000002555	-	90	42.616	ENSOARG00000018986	RRP7A	81	42.616	Ovis_aries
ENSCSAVG00000002555	-	82	41.935	ENSPPAG00000021416	-	77	41.935	Pan_paniscus
ENSCSAVG00000002555	-	81	38.863	ENSPPAG00000029825	-	85	38.863	Pan_paniscus
ENSCSAVG00000002555	-	90	40.336	ENSPPRG00000022185	RRP7A	81	40.336	Panthera_pardus
ENSCSAVG00000002555	-	90	42.194	ENSPANG00000025354	-	88	40.945	Papio_anubis
ENSCSAVG00000002555	-	90	38.397	ENSPANG00000032001	-	87	38.000	Papio_anubis
ENSCSAVG00000002555	-	86	39.056	ENSPKIG00000007209	rrp7a	69	40.343	Paramormyrops_kingsleyae
ENSCSAVG00000002555	-	85	44.000	ENSPSIG00000007988	RRP7A	83	44.000	Pelodiscus_sinensis
ENSCSAVG00000002555	-	85	43.556	ENSPEMG00000022265	Rrp7a	79	43.556	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002555	-	100	35.338	ENSPMAG00000002823	rrp7a	95	35.338	Petromyzon_marinus
ENSCSAVG00000002555	-	85	43.049	ENSPCIG00000026195	RRP7A	79	43.049	Phascolarctos_cinereus
ENSCSAVG00000002555	-	92	31.559	ENSPFOG00000001042	rrp7a	88	33.463	Poecilia_formosa
ENSCSAVG00000002555	-	80	31.034	ENSPLAG00000010787	-	96	31.897	Poecilia_latipinna
ENSCSAVG00000002555	-	80	31.034	ENSPLAG00000009537	rrp7a	96	31.897	Poecilia_latipinna
ENSCSAVG00000002555	-	92	31.559	ENSPMEG00000018204	rrp7a	88	33.463	Poecilia_mexicana
ENSCSAVG00000002555	-	86	32.780	ENSPREG00000016492	rrp7a	88	33.074	Poecilia_reticulata
ENSCSAVG00000002555	-	90	42.616	ENSPPYG00000011897	RRP7A	81	42.797	Pongo_abelii
ENSCSAVG00000002555	-	90	41.772	ENSPCOG00000014018	RRP7A	81	41.772	Propithecus_coquereli
ENSCSAVG00000002555	-	80	38.863	ENSPVAG00000003330	RRP7A	80	38.863	Pteropus_vampyrus
ENSCSAVG00000002555	-	98	34.317	ENSPNYG00000020343	rrp7a	93	34.317	Pundamilia_nyererei
ENSCSAVG00000002555	-	98	35.985	ENSPNAG00000014376	rrp7a	91	35.985	Pygocentrus_nattereri
ENSCSAVG00000002555	-	86	41.593	ENSRNOG00000022896	Rrp7a	79	41.593	Rattus_norvegicus
ENSCSAVG00000002555	-	89	38.819	ENSRBIG00000040358	RRP7A	80	38.819	Rhinopithecus_bieti
ENSCSAVG00000002555	-	89	42.797	ENSRROG00000036754	RRP7A	81	42.797	Rhinopithecus_roxellana
ENSCSAVG00000002555	-	90	43.460	ENSSBOG00000009234	RRP7A	81	43.460	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002555	-	81	42.523	ENSSHAG00000005715	RRP7A	99	42.925	Sarcophilus_harrisii
ENSCSAVG00000002555	-	85	40.351	ENSSFOG00015012621	rrp7a	71	40.351	Scleropages_formosus
ENSCSAVG00000002555	-	85	33.333	ENSSMAG00000004593	rrp7a	80	34.043	Scophthalmus_maximus
ENSCSAVG00000002555	-	85	35.065	ENSSDUG00000016921	rrp7a	80	34.914	Seriola_dumerili
ENSCSAVG00000002555	-	85	35.065	ENSSLDG00000024758	rrp7a	80	34.914	Seriola_lalandi_dorsalis
ENSCSAVG00000002555	-	59	57.143	ENSSARG00000002133	-	62	57.143	Sorex_araneus
ENSCSAVG00000002555	-	75	41.327	ENSSPUG00000005373	RRP7A	78	41.327	Sphenodon_punctatus
ENSCSAVG00000002555	-	85	35.622	ENSSPAG00000016048	rrp7a	93	32.472	Stegastes_partitus
ENSCSAVG00000002555	-	90	42.194	ENSSSCG00000033983	RRP7A	81	42.373	Sus_scrofa
ENSCSAVG00000002555	-	85	43.946	ENSTGUG00000009647	RRP7A	86	43.946	Taeniopygia_guttata
ENSCSAVG00000002555	-	86	35.043	ENSTRUG00000024726	rrp7a	80	35.043	Takifugu_rubripes
ENSCSAVG00000002555	-	86	33.624	ENSTNIG00000010842	rrp7a	80	33.624	Tetraodon_nigroviridis
ENSCSAVG00000002555	-	90	42.616	ENSUAMG00000026180	RRP7A	81	42.616	Ursus_americanus
ENSCSAVG00000002555	-	90	39.662	ENSUMAG00000020394	RRP7A	80	39.662	Ursus_maritimus
ENSCSAVG00000002555	-	90	42.194	ENSVVUG00000002248	-	58	42.194	Vulpes_vulpes
ENSCSAVG00000002555	-	93	39.516	ENSXETG00000013414	rrp7a	90	39.516	Xenopus_tropicalis
ENSCSAVG00000002555	-	86	33.476	ENSXCOG00000015955	rrp7a	80	34.335	Xiphophorus_couchianus
ENSCSAVG00000002555	-	86	34.052	ENSXMAG00000006165	rrp7a	80	34.914	Xiphophorus_maculatus