EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002630 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 16717 bases
Position: chrreftig_2768:3226-19942
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004440	DRY_EERY	PF09750.9	8.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004505	-	998	-	ENSCSAVP00000004441	254 (aa)	-	H2YGJ2
ENSCSAVT00000004504	-	1055	-	ENSCSAVP00000004440	328 (aa)	-	H2YGJ1

Gene Model

Click here to download ENSCSAVG00000002630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002630	-	73	64.286	ENSG00000104859	CLASRP	100	58.140	Homo_sapiens
ENSCSAVG00000002630	-	87	39.863	ENSAPOG00000016578	clasrp	58	38.166	Acanthochromis_polyacanthus
ENSCSAVG00000002630	-	87	39.583	ENSACIG00000014149	clasrp	52	37.278	Amphilophus_citrinellus
ENSCSAVG00000002630	-	87	39.863	ENSAOCG00000005893	clasrp	62	34.677	Amphiprion_ocellaris
ENSCSAVG00000002630	-	87	39.863	ENSAPEG00000024441	clasrp	58	38.166	Amphiprion_percula
ENSCSAVG00000002630	-	87	39.726	ENSATEG00000013691	clasrp	58	38.053	Anabas_testudineus
ENSCSAVG00000002630	-	87	40.273	ENSACAG00000004151	CLASRP	51	38.889	Anolis_carolinensis
ENSCSAVG00000002630	-	73	64.286	ENSANAG00000023127	CLASRP	51	39.233	Aotus_nancymaae
ENSCSAVG00000002630	-	87	39.116	ENSACLG00000016357	clasrp	56	36.982	Astatotilapia_calliptera
ENSCSAVG00000002630	-	87	40.068	ENSCAFG00000004587	CLASRP	70	39.296	Canis_familiaris
ENSCSAVG00000002630	-	50	47.647	ENSCAFG00020012303	-	81	47.647	Canis_lupus_dingo
ENSCSAVG00000002630	-	73	64.286	ENSTSYG00000012066	CLASRP	50	39.296	Carlito_syrichta
ENSCSAVG00000002630	-	87	39.863	ENSCAPG00000014238	CLASRP	52	38.529	Cavia_aperea
ENSCSAVG00000002630	-	73	64.286	ENSCCAG00000029385	CLASRP	50	39.296	Cebus_capucinus
ENSCSAVG00000002630	-	73	64.286	ENSCATG00000040827	CLASRP	50	39.296	Cercocebus_atys
ENSCSAVG00000002630	-	87	40.068	ENSCSAG00000003231	CLASRP	70	39.296	Chlorocebus_sabaeus
ENSCSAVG00000002630	-	87	42.712	ENSCPBG00000014391	CLASRP	69	38.710	Chrysemys_picta_bellii
ENSCSAVG00000002630	-	87	66.899	ENSCING00000005087	-	83	61.846	Ciona_intestinalis
ENSCSAVG00000002630	-	73	64.286	ENSCANG00000028388	CLASRP	50	39.296	Colobus_angolensis_palliatus
ENSCSAVG00000002630	-	87	40.068	ENSCGRG00001015861	Clasrp	50	38.710	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002630	-	87	39.384	ENSCSEG00000016914	clasrp	58	37.168	Cynoglossus_semilaevis
ENSCSAVG00000002630	-	87	39.519	ENSCVAG00000004010	clasrp	57	37.278	Cyprinodon_variegatus
ENSCSAVG00000002630	-	87	37.370	ENSDARG00000061742	clasrp	51	36.012	Danio_rerio
ENSCSAVG00000002630	-	87	40.068	ENSDORG00000003450	Clasrp	51	38.710	Dipodomys_ordii
ENSCSAVG00000002630	-	87	40.068	ENSECAG00000009232	CLASRP	64	40.000	Equus_caballus
ENSCSAVG00000002630	-	87	38.408	ENSELUG00000014585	clasrp	50	37.758	Esox_lucius
ENSCSAVG00000002630	-	73	64.286	ENSFCAG00000033941	CLASRP	50	39.589	Felis_catus
ENSCSAVG00000002630	-	87	39.863	ENSFDAG00000018622	CLASRP	56	38.529	Fukomys_damarensis
ENSCSAVG00000002630	-	87	39.519	ENSFHEG00000006269	clasrp	90	36.982	Fundulus_heteroclitus
ENSCSAVG00000002630	-	77	37.452	ENSGMOG00000007125	clasrp	50	37.346	Gadus_morhua
ENSCSAVG00000002630	-	55	42.703	ENSGAFG00000012489	clasrp	99	40.541	Gambusia_affinis
ENSCSAVG00000002630	-	73	64.286	ENSGGOG00000003384	CLASRP	51	39.296	Gorilla_gorilla
ENSCSAVG00000002630	-	87	41.096	ENSHBUG00000002053	clasrp	52	36.982	Haplochromis_burtoni
ENSCSAVG00000002630	-	87	40.068	ENSHGLG00000019534	CLASRP	50	38.710	Heterocephalus_glaber_female
ENSCSAVG00000002630	-	87	38.276	ENSHCOG00000007529	clasrp	58	37.647	Hippocampus_comes
ENSCSAVG00000002630	-	87	37.500	ENSIPUG00000011928	clasrp	51	36.095	Ictalurus_punctatus
ENSCSAVG00000002630	-	87	40.068	ENSSTOG00000009069	CLASRP	56	38.710	Ictidomys_tridecemlineatus
ENSCSAVG00000002630	-	50	47.647	ENSJJAG00000016124	-	78	47.647	Jaculus_jaculus
ENSCSAVG00000002630	-	100	37.612	ENSKMAG00000020973	clasrp	51	39.527	Kryptolebias_marmoratus
ENSCSAVG00000002630	-	87	40.068	ENSLBEG00000021054	clasrp	51	37.758	Labrus_bergylta
ENSCSAVG00000002630	-	87	41.581	ENSLOCG00000014647	clasrp	50	37.425	Lepisosteus_oculatus
ENSCSAVG00000002630	-	87	40.690	ENSLAFG00000008075	CLASRP	52	39.296	Loxodonta_africana
ENSCSAVG00000002630	-	73	64.286	ENSMFAG00000032121	CLASRP	50	39.296	Macaca_fascicularis
ENSCSAVG00000002630	-	73	64.286	ENSMMUG00000014155	CLASRP	50	39.296	Macaca_mulatta
ENSCSAVG00000002630	-	73	64.286	ENSMNEG00000000043	CLASRP	50	39.003	Macaca_nemestrina
ENSCSAVG00000002630	-	87	40.068	ENSMLEG00000034161	CLASRP	50	39.296	Mandrillus_leucophaeus
ENSCSAVG00000002630	-	87	40.339	ENSMAMG00000011689	clasrp	50	38.643	Mastacembelus_armatus
ENSCSAVG00000002630	-	87	41.096	ENSMZEG00005016696	clasrp	53	36.982	Maylandia_zebra
ENSCSAVG00000002630	-	87	40.411	ENSMAUG00000000378	Clasrp	50	39.003	Mesocricetus_auratus
ENSCSAVG00000002630	-	73	64.286	ENSMICG00000006996	CLASRP	51	39.296	Microcebus_murinus
ENSCSAVG00000002630	-	87	40.136	ENSMOCG00000007548	Clasrp	50	38.710	Microtus_ochrogaster
ENSCSAVG00000002630	-	85	33.803	ENSMMOG00000012523	clasrp	55	37.500	Mola_mola
ENSCSAVG00000002630	-	87	39.661	ENSMODG00000020854	CLASRP	51	39.244	Monodelphis_domestica
ENSCSAVG00000002630	-	87	38.832	ENSMALG00000012365	clasrp	70	37.278	Monopterus_albus
ENSCSAVG00000002630	-	87	40.068	MGP_CAROLIEiJ_G0029299	Clasrp	50	38.710	Mus_caroli
ENSCSAVG00000002630	-	87	40.068	ENSMUSG00000061028	Clasrp	81	47.647	Mus_musculus
ENSCSAVG00000002630	-	87	40.068	MGP_PahariEiJ_G0021159	Clasrp	50	38.710	Mus_pahari
ENSCSAVG00000002630	-	87	40.068	MGP_SPRETEiJ_G0030383	Clasrp	50	38.710	Mus_spretus
ENSCSAVG00000002630	-	87	40.411	ENSNGAG00000016249	Clasrp	51	38.710	Nannospalax_galili
ENSCSAVG00000002630	-	87	39.116	ENSNBRG00000004382	clasrp	67	36.982	Neolamprologus_brichardi
ENSCSAVG00000002630	-	87	33.106	ENSMEUG00000009998	CLASRP	51	33.824	Notamacropus_eugenii
ENSCSAVG00000002630	-	87	39.116	ENSONIG00000003756	clasrp	50	36.982	Oreochromis_niloticus
ENSCSAVG00000002630	-	87	40.476	ENSORLG00000006568	clasrp	52	37.870	Oryzias_latipes
ENSCSAVG00000002630	-	87	40.476	ENSORLG00020003213	clasrp	53	37.537	Oryzias_latipes_hni
ENSCSAVG00000002630	-	87	40.476	ENSORLG00015005655	clasrp	52	37.537	Oryzias_latipes_hsok
ENSCSAVG00000002630	-	87	40.476	ENSOMEG00000013102	clasrp	50	37.870	Oryzias_melastigma
ENSCSAVG00000002630	-	73	64.286	ENSPPAG00000040215	CLASRP	50	39.296	Pan_paniscus
ENSCSAVG00000002630	-	73	64.286	ENSPPRG00000017479	CLASRP	51	39.589	Panthera_pardus
ENSCSAVG00000002630	-	50	48.235	ENSPTIG00000006698	-	81	48.235	Panthera_tigris_altaica
ENSCSAVG00000002630	-	73	64.286	ENSPTRG00000022583	CLASRP	50	39.296	Pan_troglodytes
ENSCSAVG00000002630	-	73	64.286	ENSPANG00000012804	CLASRP	50	39.296	Papio_anubis
ENSCSAVG00000002630	-	87	40.878	ENSPKIG00000011266	clasrp	70	37.758	Paramormyrops_kingsleyae
ENSCSAVG00000002630	-	89	39.116	ENSPMGG00000014094	clasrp	59	36.905	Periophthalmus_magnuspinnatus
ENSCSAVG00000002630	-	87	40.411	ENSPEMG00000017845	Clasrp	50	39.003	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002630	-	87	40.476	ENSPCIG00000022909	CLASRP	56	39.589	Phascolarctos_cinereus
ENSCSAVG00000002630	-	87	40.614	ENSPFOG00000010596	clasrp	50	38.235	Poecilia_formosa
ENSCSAVG00000002630	-	87	40.411	ENSPLAG00000019619	clasrp	84	37.758	Poecilia_latipinna
ENSCSAVG00000002630	-	77	39.313	ENSPREG00000001075	clasrp	55	36.416	Poecilia_reticulata
ENSCSAVG00000002630	-	73	64.286	ENSPCOG00000018016	CLASRP	50	39.296	Propithecus_coquereli
ENSCSAVG00000002630	-	87	39.116	ENSPNYG00000006221	clasrp	58	36.982	Pundamilia_nyererei
ENSCSAVG00000002630	-	100	35.061	ENSPNAG00000019075	clasrp	51	35.435	Pygocentrus_nattereri
ENSCSAVG00000002630	-	87	40.068	ENSRNOG00000046000	Clasrp	50	38.710	Rattus_norvegicus
ENSCSAVG00000002630	-	50	47.647	ENSSBOG00000029935	-	81	47.647	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002630	-	87	40.803	ENSSHAG00000004444	-	67	39.130	Sarcophilus_harrisii
ENSCSAVG00000002630	-	87	40.476	ENSSFOG00015006361	clasrp	50	38.757	Scleropages_formosus
ENSCSAVG00000002630	-	87	38.908	ENSSMAG00000013333	clasrp	52	37.353	Scophthalmus_maximus
ENSCSAVG00000002630	-	87	37.931	ENSSDUG00000018560	clasrp	54	36.873	Seriola_dumerili
ENSCSAVG00000002630	-	87	39.726	ENSSLDG00000020726	clasrp	57	38.053	Seriola_lalandi_dorsalis
ENSCSAVG00000002630	-	87	40.956	ENSSPUG00000010734	CLASRP	60	37.537	Sphenodon_punctatus
ENSCSAVG00000002630	-	87	39.100	ENSSPAG00000008665	clasrp	50	37.870	Stegastes_partitus
ENSCSAVG00000002630	-	50	47.647	ENSSSCG00000034231	-	81	47.647	Sus_scrofa
ENSCSAVG00000002630	-	87	40.068	ENSTRUG00000009842	clasrp	84	37.758	Takifugu_rubripes
ENSCSAVG00000002630	-	87	40.273	ENSTNIG00000007734	clasrp	50	38.235	Tetraodon_nigroviridis
ENSCSAVG00000002630	-	50	47.647	ENSUAMG00000023365	-	81	47.647	Ursus_americanus
ENSCSAVG00000002630	-	87	40.068	ENSUMAG00000023392	CLASRP	81	41.017	Ursus_maritimus
ENSCSAVG00000002630	-	79	39.326	ENSVVUG00000008161	CLASRP	71	43.066	Vulpes_vulpes
ENSCSAVG00000002630	-	87	40.068	ENSXMAG00000018599	clasrp	50	37.758	Xiphophorus_maculatus