EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 672 bases
Position: chrreftig_488:99193-99864
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004506	RRP36	PF06102.12	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004572	-	672	-	ENSCSAVP00000004506	224 (aa)	-	H2YGQ7

Gene Model

Click here to download ENSCSAVG00000002672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002672	-	85	36.869	ENSG00000124541	RRP36	75	36.869	Homo_sapiens
ENSCSAVG00000002672	-	88	38.693	ENSAPOG00000022015	rrp36	64	40.107	Acanthochromis_polyacanthus
ENSCSAVG00000002672	-	90	35.577	ENSACIG00000020578	-	55	35.519	Amphilophus_citrinellus
ENSCSAVG00000002672	-	84	40.722	ENSAOCG00000013439	rrp36	58	42.268	Amphiprion_ocellaris
ENSCSAVG00000002672	-	84	40.722	ENSAPEG00000020996	rrp36	58	42.268	Amphiprion_percula
ENSCSAVG00000002672	-	78	42.857	ENSATEG00000016946	rrp36	50	42.857	Anabas_testudineus
ENSCSAVG00000002672	-	85	36.869	ENSANAG00000021773	RRP36	75	36.869	Aotus_nancymaae
ENSCSAVG00000002672	-	78	30.857	ENSACLG00000013982	RRP36	67	30.857	Astatotilapia_calliptera
ENSCSAVG00000002672	-	78	34.286	ENSACLG00000008408	rrp36	86	31.731	Astatotilapia_calliptera
ENSCSAVG00000002672	-	84	40.104	ENSBTAG00000053873	RRP36	76	40.104	Bos_taurus
ENSCSAVG00000002672	-	85	36.364	ENSCJAG00000004943	RRP36	76	36.869	Callithrix_jacchus
ENSCSAVG00000002672	-	80	38.798	ENSCAFG00020011057	RRP36	76	38.798	Canis_lupus_dingo
ENSCSAVG00000002672	-	73	43.114	ENSCHIG00000003210	-	72	43.114	Capra_hircus
ENSCSAVG00000002672	-	59	40.146	ENSCHIG00000019781	-	63	40.741	Capra_hircus
ENSCSAVG00000002672	-	83	40.212	ENSCHIG00000016354	-	73	40.212	Capra_hircus
ENSCSAVG00000002672	-	79	37.222	ENSTSYG00000037176	RRP36	69	37.222	Carlito_syrichta
ENSCSAVG00000002672	-	78	37.079	ENSCAPG00000010983	RRP36	74	37.079	Cavia_aperea
ENSCSAVG00000002672	-	78	37.079	ENSCPOG00000025932	RRP36	76	37.079	Cavia_porcellus
ENSCSAVG00000002672	-	85	36.869	ENSCCAG00000000048	RRP36	75	36.869	Cebus_capucinus
ENSCSAVG00000002672	-	79	37.222	ENSCATG00000041903	RRP36	68	37.222	Cercocebus_atys
ENSCSAVG00000002672	-	80	38.421	ENSCLAG00000013166	RRP36	78	38.674	Chinchilla_lanigera
ENSCSAVG00000002672	-	79	37.778	ENSCSAG00000011553	RRP36	68	37.778	Chlorocebus_sabaeus
ENSCSAVG00000002672	-	87	38.384	ENSCPBG00000003555	RRP36	51	38.421	Chrysemys_picta_bellii
ENSCSAVG00000002672	-	95	57.143	ENSCING00000012193	-	86	57.143	Ciona_intestinalis
ENSCSAVG00000002672	-	79	37.778	ENSCANG00000035127	RRP36	69	37.778	Colobus_angolensis_palliatus
ENSCSAVG00000002672	-	85	38.220	ENSCGRG00001021461	Rrp36	81	38.220	Cricetulus_griseus_chok1gshd
ENSCSAVG00000002672	-	85	38.220	ENSCGRG00000006286	Rrp36	81	38.220	Cricetulus_griseus_crigri
ENSCSAVG00000002672	-	81	36.508	ENSCSEG00000001039	RRP36	58	38.384	Cynoglossus_semilaevis
ENSCSAVG00000002672	-	92	33.014	ENSCVAG00000017798	rrp36	87	32.836	Cyprinodon_variegatus
ENSCSAVG00000002672	-	89	39.604	ENSDARG00000032516	rrp36	53	41.618	Danio_rerio
ENSCSAVG00000002672	-	85	36.979	ENSDORG00000012186	Rrp36	80	36.979	Dipodomys_ordii
ENSCSAVG00000002672	-	84	37.629	ENSEASG00005003169	RRP36	82	37.629	Equus_asinus_asinus
ENSCSAVG00000002672	-	79	39.779	ENSECAG00000040238	RRP36	77	39.779	Equus_caballus
ENSCSAVG00000002672	-	59	39.416	ENSEEUG00000010515	RRP36	53	39.416	Erinaceus_europaeus
ENSCSAVG00000002672	-	84	39.378	ENSFCAG00000043818	RRP36	74	39.378	Felis_catus
ENSCSAVG00000002672	-	79	38.889	ENSFDAG00000010380	RRP36	81	38.889	Fukomys_damarensis
ENSCSAVG00000002672	-	59	42.105	ENSFHEG00000000761	rrp36	65	42.105	Fundulus_heteroclitus
ENSCSAVG00000002672	-	78	41.573	ENSGACG00000019603	RRP36	53	42.222	Gasterosteus_aculeatus
ENSCSAVG00000002672	-	85	36.364	ENSGGOG00000037384	RRP36	76	36.364	Gorilla_gorilla
ENSCSAVG00000002672	-	85	36.269	ENSHBUG00000008974	RRP36	58	36.269	Haplochromis_burtoni
ENSCSAVG00000002672	-	84	37.879	ENSHGLG00000018082	RRP36	76	37.879	Heterocephalus_glaber_female
ENSCSAVG00000002672	-	84	37.879	ENSHGLG00100019303	RRP36	76	37.879	Heterocephalus_glaber_male
ENSCSAVG00000002672	-	63	35.862	ENSHCOG00000010303	rrp36	66	31.788	Hippocampus_comes
ENSCSAVG00000002672	-	87	37.563	ENSIPUG00000016548	rrp36	62	37.566	Ictalurus_punctatus
ENSCSAVG00000002672	-	78	38.547	ENSSTOG00000009511	RRP36	74	38.547	Ictidomys_tridecemlineatus
ENSCSAVG00000002672	-	80	36.957	ENSJJAG00000023363	Rrp36	79	36.957	Jaculus_jaculus
ENSCSAVG00000002672	-	88	38.693	ENSKMAG00000006968	rrp36	54	38.743	Kryptolebias_marmoratus
ENSCSAVG00000002672	-	91	37.143	ENSLACG00000001888	rrp36	53	39.080	Latimeria_chalumnae
ENSCSAVG00000002672	-	78	39.106	ENSLAFG00000032704	RRP36	81	39.106	Loxodonta_africana
ENSCSAVG00000002672	-	79	37.778	ENSMFAG00000003547	RRP36	68	37.778	Macaca_fascicularis
ENSCSAVG00000002672	-	79	37.222	ENSMNEG00000044747	RRP36	68	37.222	Macaca_nemestrina
ENSCSAVG00000002672	-	79	37.222	ENSMLEG00000034272	RRP36	68	37.222	Mandrillus_leucophaeus
ENSCSAVG00000002672	-	78	37.714	ENSMZEG00005015204	RRP36	58	36.269	Maylandia_zebra
ENSCSAVG00000002672	-	80	38.333	ENSMAUG00000003648	Rrp36	78	38.333	Mesocricetus_auratus
ENSCSAVG00000002672	-	79	37.222	ENSMICG00000045230	RRP36	69	37.222	Microcebus_murinus
ENSCSAVG00000002672	-	84	37.037	ENSMOCG00000002009	Rrp36	77	37.037	Microtus_ochrogaster
ENSCSAVG00000002672	-	78	38.983	ENSMMOG00000018637	-	51	38.983	Mola_mola
ENSCSAVG00000002672	-	77	40.462	ENSMALG00000008142	-	54	40.462	Monopterus_albus
ENSCSAVG00000002672	-	84	38.743	MGP_CAROLIEiJ_G0021680	Rrp36	74	38.743	Mus_caroli
ENSCSAVG00000002672	-	84	37.500	ENSMUSG00000023971	Rrp36	82	37.500	Mus_musculus
ENSCSAVG00000002672	-	80	37.705	MGP_PahariEiJ_G0020671	Rrp36	78	37.705	Mus_pahari
ENSCSAVG00000002672	-	80	38.462	MGP_SPRETEiJ_G0022592	Rrp36	72	38.462	Mus_spretus
ENSCSAVG00000002672	-	50	40.351	ENSNGAG00000021177	-	69	40.196	Nannospalax_galili
ENSCSAVG00000002672	-	79	38.122	ENSNLEG00000033289	RRP36	81	38.122	Nomascus_leucogenys
ENSCSAVG00000002672	-	61	48.175	ENSOPRG00000002274	RRP36	54	48.175	Ochotona_princeps
ENSCSAVG00000002672	-	78	37.989	ENSODEG00000015915	RRP36	58	44.526	Octodon_degus
ENSCSAVG00000002672	-	91	35.577	ENSONIG00000015983	rrp36	65	35.577	Oreochromis_niloticus
ENSCSAVG00000002672	-	77	37.714	ENSORLG00000029500	rrp36	50	38.857	Oryzias_latipes
ENSCSAVG00000002672	-	77	39.548	ENSORLG00020017452	-	50	39.548	Oryzias_latipes_hni
ENSCSAVG00000002672	-	77	39.773	ENSORLG00015016898	rrp36	50	39.773	Oryzias_latipes_hsok
ENSCSAVG00000002672	-	77	40.462	ENSOMEG00000008623	RRP36	50	40.462	Oryzias_melastigma
ENSCSAVG00000002672	-	79	37.222	ENSOGAG00000012699	RRP36	76	37.222	Otolemur_garnettii
ENSCSAVG00000002672	-	79	30.556	ENSPPAG00000042831	-	69	30.556	Pan_paniscus
ENSCSAVG00000002672	-	84	38.860	ENSPPRG00000014610	RRP36	74	38.860	Panthera_pardus
ENSCSAVG00000002672	-	84	38.860	ENSPTIG00000010853	RRP36	74	38.860	Panthera_tigris_altaica
ENSCSAVG00000002672	-	85	36.869	ENSPTRG00000018184	RRP36	75	36.869	Pan_troglodytes
ENSCSAVG00000002672	-	79	37.778	ENSPANG00000025140	RRP36	68	37.778	Papio_anubis
ENSCSAVG00000002672	-	77	37.572	ENSPKIG00000004303	rrp36	50	38.150	Paramormyrops_kingsleyae
ENSCSAVG00000002672	-	72	38.182	ENSPMGG00000016870	rrp36	52	38.037	Periophthalmus_magnuspinnatus
ENSCSAVG00000002672	-	80	38.674	ENSPEMG00000007015	Rrp36	78	38.674	Peromyscus_maniculatus_bairdii
ENSCSAVG00000002672	-	85	37.436	ENSPCIG00000009179	RRP36	74	37.436	Phascolarctos_cinereus
ENSCSAVG00000002672	-	85	35.233	ENSPLAG00000023901	rrp36	53	35.233	Poecilia_latipinna
ENSCSAVG00000002672	-	79	38.333	ENSPPYG00000016628	RRP36	68	38.333	Pongo_abelii
ENSCSAVG00000002672	-	79	38.333	ENSPCOG00000018401	RRP36	70	38.333	Propithecus_coquereli
ENSCSAVG00000002672	-	61	45.255	ENSPVAG00000008714	RRP36	53	45.255	Pteropus_vampyrus
ENSCSAVG00000002672	-	78	37.714	ENSPNYG00000018030	RRP36	53	37.714	Pundamilia_nyererei
ENSCSAVG00000002672	-	84	37.500	ENSRNOG00000017836	Rrp36	76	37.500	Rattus_norvegicus
ENSCSAVG00000002672	-	85	36.364	ENSRBIG00000040019	RRP36	75	36.364	Rhinopithecus_bieti
ENSCSAVG00000002672	-	85	35.859	ENSRROG00000040721	RRP36	75	35.859	Rhinopithecus_roxellana
ENSCSAVG00000002672	-	79	38.889	ENSSBOG00000030228	RRP36	70	38.889	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002672	-	92	38.095	ENSSFOG00015023058	rrp36	50	39.884	Scleropages_formosus
ENSCSAVG00000002672	-	77	40.462	ENSSLDG00000019741	RRP36	87	39.153	Seriola_lalandi_dorsalis
ENSCSAVG00000002672	-	61	46.324	ENSSARG00000000873	RRP36	61	46.324	Sorex_araneus
ENSCSAVG00000002672	-	90	38.462	ENSSPAG00000017154	rrp36	65	38.462	Stegastes_partitus
ENSCSAVG00000002672	-	78	39.106	ENSSSCG00000001656	RRP36	69	39.548	Sus_scrofa
ENSCSAVG00000002672	-	78	37.143	ENSTRUG00000021893	rrp36	52	37.143	Takifugu_rubripes
ENSCSAVG00000002672	-	96	33.333	ENSTNIG00000004741	rrp36	76	34.197	Tetraodon_nigroviridis
ENSCSAVG00000002672	-	79	31.667	ENSTBEG00000012326	RRP36	81	32.597	Tupaia_belangeri
ENSCSAVG00000002672	-	78	37.222	ENSTTRG00000007001	RRP36	76	36.082	Tursiops_truncatus
ENSCSAVG00000002672	-	84	37.824	ENSUAMG00000015865	RRP36	76	37.824	Ursus_americanus
ENSCSAVG00000002672	-	58	45.736	ENSUMAG00000008726	RRP36	76	45.736	Ursus_maritimus
ENSCSAVG00000002672	-	78	40.223	ENSVPAG00000008904	RRP36	81	40.223	Vicugna_pacos
ENSCSAVG00000002672	-	80	38.798	ENSVVUG00000027816	RRP36	76	38.798	Vulpes_vulpes
ENSCSAVG00000002672	-	85	34.715	ENSXCOG00000011238	rrp36	50	34.197	Xiphophorus_couchianus