EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSCSAVG00000002773 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7052 bases
Position: chrreftig_83:1031361-1038412
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004650	zf-C2H2	PF00096.26	9.1e-16	1	2
ENSCSAVP00000004650	zf-C2H2	PF00096.26	9.1e-16	2	2
ENSCSAVP00000004649	zf-C2H2	PF00096.26	1.1e-14	1	2
ENSCSAVP00000004649	zf-C2H2	PF00096.26	1.1e-14	2	2
ENSCSAVP00000004650	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004716	-	1793	-	ENSCSAVP00000004649	587 (aa)	-	H2YH50
ENSCSAVT00000004717	-	1236	-	ENSCSAVP00000004650	412 (aa)	-	H2YH51

Gene Model

Click here to download ENSCSAVG00000002773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000002773	-	73	36.923	ENSCSAVG00000010960	-	99	36.923
ENSCSAVG00000002773	-	78	39.130	ENSCSAVG00000001989	-	99	42.222
ENSCSAVG00000002773	-	96	37.805	ENSCSAVG00000006608	-	98	46.237