EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000002800 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1377 bases
Position: chrreftig_83:1042343-1043719
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000004695	RRM_1	PF00076.22	7.1e-18	1	2
ENSCSAVP00000004695	RRM_1	PF00076.22	7.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000004762	-	1233	-	ENSCSAVP00000004695	411 (aa)	-	H2YH96

Gene Model

Click here to download ENSCSAVG00000002800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000002800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000002800	-	78	54.015	ENSG00000185946	RNPC3	93	37.500	Homo_sapiens
ENSCSAVG00000002800	-	76	54.615	ENSAPOG00000017371	rnpc3	95	35.744	Acanthochromis_polyacanthus
ENSCSAVG00000002800	-	74	61.667	ENSAMEG00000001694	RNPC3	93	38.017	Ailuropoda_melanoleuca
ENSCSAVG00000002800	-	76	55.385	ENSACIG00000021043	rnpc3	60	55.385	Amphilophus_citrinellus
ENSCSAVG00000002800	-	84	47.305	ENSAOCG00000014052	rnpc3	93	35.845	Amphiprion_ocellaris
ENSCSAVG00000002800	-	84	47.305	ENSAPEG00000008739	rnpc3	93	35.845	Amphiprion_percula
ENSCSAVG00000002800	-	87	45.550	ENSATEG00000021263	rnpc3	95	35.887	Anabas_testudineus
ENSCSAVG00000002800	-	65	59.016	ENSAPLG00000015605	RNPC3	98	35.426	Anas_platyrhynchos
ENSCSAVG00000002800	-	99	39.623	ENSACAG00000002029	RNPC3	93	38.333	Anolis_carolinensis
ENSCSAVG00000002800	-	74	60.833	ENSANAG00000019950	RNPC3	93	37.782	Aotus_nancymaae
ENSCSAVG00000002800	-	76	56.154	ENSACLG00000014702	rnpc3	94	37.945	Astatotilapia_calliptera
ENSCSAVG00000002800	-	80	50.336	ENSAMXG00000033372	rnpc3	94	36.420	Astyanax_mexicanus
ENSCSAVG00000002800	-	74	61.667	ENSBTAG00000019091	RNPC3	59	61.667	Bos_taurus
ENSCSAVG00000002800	-	72	60.833	ENSCJAG00000035686	RNPC3	93	39.186	Callithrix_jacchus
ENSCSAVG00000002800	-	74	61.667	ENSCAFG00000019972	RNPC3	58	61.667	Canis_familiaris
ENSCSAVG00000002800	-	74	61.667	ENSCAFG00020011300	RNPC3	93	37.344	Canis_lupus_dingo
ENSCSAVG00000002800	-	74	61.667	ENSCHIG00000020361	RNPC3	58	61.667	Capra_hircus
ENSCSAVG00000002800	-	74	60.833	ENSTSYG00000030256	RNPC3	59	60.833	Carlito_syrichta
ENSCSAVG00000002800	-	89	35.071	ENSCAPG00000013600	RNPC3	99	35.225	Cavia_aperea
ENSCSAVG00000002800	-	74	61.667	ENSCPOG00000031638	RNPC3	93	37.552	Cavia_porcellus
ENSCSAVG00000002800	-	74	60.833	ENSCCAG00000024301	RNPC3	93	37.967	Cebus_capucinus
ENSCSAVG00000002800	-	78	54.015	ENSCATG00000002086	RNPC3	93	37.423	Cercocebus_atys
ENSCSAVG00000002800	-	74	61.667	ENSCLAG00000005169	RNPC3	93	37.628	Chinchilla_lanigera
ENSCSAVG00000002800	-	78	54.015	ENSCSAG00000001519	RNPC3	93	37.423	Chlorocebus_sabaeus
ENSCSAVG00000002800	-	100	38.046	ENSCPBG00000028311	RNPC3	93	37.838	Chrysemys_picta_bellii
ENSCSAVG00000002800	-	100	54.624	ENSCING00000021276	-	98	54.624	Ciona_intestinalis
ENSCSAVG00000002800	-	78	54.015	ENSCANG00000031444	RNPC3	93	37.628	Colobus_angolensis_palliatus
ENSCSAVG00000002800	-	81	51.007	ENSCSEG00000013475	rnpc3	94	36.667	Cynoglossus_semilaevis
ENSCSAVG00000002800	-	76	50.000	ENSCVAG00000002645	rnpc3	61	50.000	Cyprinodon_variegatus
ENSCSAVG00000002800	-	100	37.214	ENSDARG00000011247	rnpc3	94	37.526	Danio_rerio
ENSCSAVG00000002800	-	74	60.833	ENSDNOG00000044555	-	93	38.095	Dasypus_novemcinctus
ENSCSAVG00000002800	-	74	61.667	ENSDNOG00000047498	-	93	38.509	Dasypus_novemcinctus
ENSCSAVG00000002800	-	74	60.833	ENSDORG00000027343	Rnpc3	93	37.292	Dipodomys_ordii
ENSCSAVG00000002800	-	73	55.738	ENSEBUG00000002068	rnpc3	95	35.614	Eptatretus_burgeri
ENSCSAVG00000002800	-	84	49.693	ENSEASG00005015957	RNPC3	67	49.693	Equus_asinus_asinus
ENSCSAVG00000002800	-	84	50.307	ENSECAG00000021148	RNPC3	67	50.307	Equus_caballus
ENSCSAVG00000002800	-	74	57.851	ENSELUG00000002264	rnpc3	65	47.500	Esox_lucius
ENSCSAVG00000002800	-	74	61.667	ENSFCAG00000024312	RNPC3	93	37.681	Felis_catus
ENSCSAVG00000002800	-	91	35.491	ENSFALG00000002580	RNPC3	98	35.294	Ficedula_albicollis
ENSCSAVG00000002800	-	74	61.667	ENSFDAG00000019948	RNPC3	93	37.397	Fukomys_damarensis
ENSCSAVG00000002800	-	71	58.559	ENSFHEG00000020647	rnpc3	94	36.325	Fundulus_heteroclitus
ENSCSAVG00000002800	-	99	37.391	ENSGMOG00000019213	rnpc3	93	37.391	Gadus_morhua
ENSCSAVG00000002800	-	100	38.494	ENSGALG00000005162	RNPC3	87	37.397	Gallus_gallus
ENSCSAVG00000002800	-	76	53.488	ENSGAFG00000017236	rnpc3	94	35.950	Gambusia_affinis
ENSCSAVG00000002800	-	76	53.077	ENSGACG00000002048	rnpc3	92	35.000	Gasterosteus_aculeatus
ENSCSAVG00000002800	-	100	37.474	ENSGAGG00000008438	RNPC3	92	37.137	Gopherus_agassizii
ENSCSAVG00000002800	-	74	61.667	ENSHGLG00000001708	RNPC3	93	36.722	Heterocephalus_glaber_female
ENSCSAVG00000002800	-	74	61.667	ENSHGLG00100003005	RNPC3	93	36.722	Heterocephalus_glaber_male
ENSCSAVG00000002800	-	76	56.154	ENSHCOG00000017135	rnpc3	95	37.959	Hippocampus_comes
ENSCSAVG00000002800	-	73	56.557	ENSIPUG00000002916	rnpc3	94	36.082	Ictalurus_punctatus
ENSCSAVG00000002800	-	74	62.500	ENSSTOG00000025020	RNPC3	58	62.500	Ictidomys_tridecemlineatus
ENSCSAVG00000002800	-	77	53.333	ENSJJAG00000010203	Rnpc3	93	36.907	Jaculus_jaculus
ENSCSAVG00000002800	-	74	53.125	ENSKMAG00000017358	rnpc3	95	36.688	Kryptolebias_marmoratus
ENSCSAVG00000002800	-	76	53.488	ENSLBEG00000024901	rnpc3	60	53.488	Labrus_bergylta
ENSCSAVG00000002800	-	74	61.475	ENSLAFG00000032342	RNPC3	93	37.603	Loxodonta_africana
ENSCSAVG00000002800	-	78	54.015	ENSMFAG00000002004	RNPC3	93	37.423	Macaca_fascicularis
ENSCSAVG00000002800	-	83	33.594	ENSMFAG00000002917	-	78	35.799	Macaca_fascicularis
ENSCSAVG00000002800	-	78	54.015	ENSMMUG00000018039	RNPC3	62	54.015	Macaca_mulatta
ENSCSAVG00000002800	-	100	36.038	ENSMMUG00000002098	-	92	36.754	Macaca_mulatta
ENSCSAVG00000002800	-	72	35.905	ENSMNEG00000029209	-	78	36.202	Macaca_nemestrina
ENSCSAVG00000002800	-	72	36.471	ENSMLEG00000034644	-	75	36.765	Mandrillus_leucophaeus
ENSCSAVG00000002800	-	78	54.015	ENSMLEG00000033628	RNPC3	93	37.423	Mandrillus_leucophaeus
ENSCSAVG00000002800	-	75	52.344	ENSMAMG00000007496	rnpc3	61	51.538	Mastacembelus_armatus
ENSCSAVG00000002800	-	76	56.154	ENSMZEG00005020233	rnpc3	61	56.154	Maylandia_zebra
ENSCSAVG00000002800	-	91	36.607	ENSMGAG00000006381	RNPC3	98	35.491	Meleagris_gallopavo
ENSCSAVG00000002800	-	74	61.667	ENSMICG00000029591	RNPC3	58	61.667	Microcebus_murinus
ENSCSAVG00000002800	-	100	35.153	ENSMMOG00000005309	rnpc3	94	36.245	Mola_mola
ENSCSAVG00000002800	-	76	50.769	ENSMALG00000015471	rnpc3	95	36.437	Monopterus_albus
ENSCSAVG00000002800	-	74	61.667	ENSMPUG00000007349	RNPC3	93	37.759	Mustela_putorius_furo
ENSCSAVG00000002800	-	74	61.667	ENSMLUG00000028743	RNPC3	93	38.351	Myotis_lucifugus
ENSCSAVG00000002800	-	74	60.833	ENSNGAG00000010939	Rnpc3	93	37.882	Nannospalax_galili
ENSCSAVG00000002800	-	76	56.154	ENSNBRG00000012196	rnpc3	91	38.155	Neolamprologus_brichardi
ENSCSAVG00000002800	-	78	54.015	ENSNLEG00000012013	RNPC3	93	37.500	Nomascus_leucogenys
ENSCSAVG00000002800	-	100	39.834	ENSODEG00000007612	RNPC3	93	38.509	Octodon_degus
ENSCSAVG00000002800	-	76	56.154	ENSONIG00000004770	rnpc3	98	37.810	Oreochromis_niloticus
ENSCSAVG00000002800	-	82	45.946	ENSOANG00000008220	RNPC3	98	35.498	Ornithorhynchus_anatinus
ENSCSAVG00000002800	-	74	61.667	ENSOCUG00000004016	RNPC3	93	37.344	Oryctolagus_cuniculus
ENSCSAVG00000002800	-	74	55.556	ENSORLG00000005694	rnpc3	61	55.556	Oryzias_latipes
ENSCSAVG00000002800	-	74	55.556	ENSORLG00020005513	rnpc3	95	36.268	Oryzias_latipes_hni
ENSCSAVG00000002800	-	74	55.556	ENSORLG00015002179	rnpc3	61	55.556	Oryzias_latipes_hsok
ENSCSAVG00000002800	-	75	56.349	ENSOMEG00000017737	rnpc3	61	56.349	Oryzias_melastigma
ENSCSAVG00000002800	-	74	60.833	ENSOGAG00000026182	RNPC3	93	36.983	Otolemur_garnettii
ENSCSAVG00000002800	-	74	61.667	ENSOARG00000018719	RNPC3	58	61.667	Ovis_aries
ENSCSAVG00000002800	-	78	54.015	ENSPPAG00000037459	RNPC3	93	37.551	Pan_paniscus
ENSCSAVG00000002800	-	74	61.667	ENSPPRG00000020246	RNPC3	93	37.681	Panthera_pardus
ENSCSAVG00000002800	-	74	61.667	ENSPTIG00000009887	RNPC3	94	37.681	Panthera_tigris_altaica
ENSCSAVG00000002800	-	78	54.015	ENSPTRG00000033902	RNPC3	93	37.423	Pan_troglodytes
ENSCSAVG00000002800	-	100	33.333	ENSPANG00000029957	-	94	31.947	Papio_anubis
ENSCSAVG00000002800	-	78	54.015	ENSPANG00000012137	RNPC3	93	37.500	Papio_anubis
ENSCSAVG00000002800	-	77	53.383	ENSPKIG00000008828	rnpc3	94	34.756	Paramormyrops_kingsleyae
ENSCSAVG00000002800	-	61	34.688	ENSPSIG00000007396	RNPC3	97	33.125	Pelodiscus_sinensis
ENSCSAVG00000002800	-	73	58.678	ENSPMGG00000011742	rnpc3	62	55.303	Periophthalmus_magnuspinnatus
ENSCSAVG00000002800	-	72	56.198	ENSPMAG00000003778	rnpc3	58	51.095	Petromyzon_marinus
ENSCSAVG00000002800	-	76	54.264	ENSPFOG00000009895	rnpc3	94	36.289	Poecilia_formosa
ENSCSAVG00000002800	-	76	54.264	ENSPLAG00000012023	rnpc3	94	36.100	Poecilia_latipinna
ENSCSAVG00000002800	-	76	54.264	ENSPMEG00000003663	rnpc3	94	36.495	Poecilia_mexicana
ENSCSAVG00000002800	-	76	54.264	ENSPREG00000010206	rnpc3	94	36.495	Poecilia_reticulata
ENSCSAVG00000002800	-	60	42.391	ENSPPYG00000001102	RNPC3	93	30.993	Pongo_abelii
ENSCSAVG00000002800	-	76	55.385	ENSPNYG00000020603	rnpc3	94	37.736	Pundamilia_nyererei
ENSCSAVG00000002800	-	78	45.405	ENSRBIG00000043897	RNPC3	92	34.286	Rhinopithecus_bieti
ENSCSAVG00000002800	-	78	54.015	ENSRROG00000032334	RNPC3	93	37.423	Rhinopithecus_roxellana
ENSCSAVG00000002800	-	74	60.833	ENSSBOG00000024473	RNPC3	93	38.017	Saimiri_boliviensis_boliviensis
ENSCSAVG00000002800	-	100	38.046	ENSSHAG00000011859	RNPC3	93	38.462	Sarcophilus_harrisii
ENSCSAVG00000002800	-	74	55.738	ENSSFOG00015013055	rnpc3	96	36.701	Scleropages_formosus
ENSCSAVG00000002800	-	76	53.077	ENSSMAG00000020346	rnpc3	61	53.077	Scophthalmus_maximus
ENSCSAVG00000002800	-	76	53.077	ENSSDUG00000006600	rnpc3	95	34.827	Seriola_dumerili
ENSCSAVG00000002800	-	76	53.077	ENSSLDG00000007979	rnpc3	95	35.246	Seriola_lalandi_dorsalis
ENSCSAVG00000002800	-	74	55.385	ENSSPAG00000005633	rnpc3	94	37.500	Stegastes_partitus
ENSCSAVG00000002800	-	91	36.591	ENSTGUG00000004795	-	98	35.682	Taeniopygia_guttata
ENSCSAVG00000002800	-	76	53.846	ENSTNIG00000018963	rnpc3	95	37.243	Tetraodon_nigroviridis
ENSCSAVG00000002800	-	74	61.667	ENSUMAG00000007775	RNPC3	94	37.888	Ursus_maritimus
ENSCSAVG00000002800	-	74	61.667	ENSVVUG00000000331	RNPC3	93	37.344	Vulpes_vulpes
ENSCSAVG00000002800	-	73	60.331	ENSXETG00000025027	rnpc3	94	34.343	Xenopus_tropicalis
ENSCSAVG00000002800	-	74	53.488	ENSXCOG00000005013	rnpc3	94	35.950	Xiphophorus_couchianus
ENSCSAVG00000002800	-	76	53.488	ENSXMAG00000006495	rnpc3	94	36.345	Xiphophorus_maculatus